Annual Research Institutes Reports



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Conference Papers


  1. Sant P & Hewling M (2011), Digital Forensics: The need for Integration. Proceedings of 6th International Workshop on Digital Forensics and Incident Analysis (WFDIA 2011), Kingston University, UK, 7-8 July 2011.

  2. S Gu, Y Yue, C Maple and CD Wu (2011), Study of localisation algorithms in wireless sensor networks, 17th International Conference of Automation and Computer, Huddersfield, 10 September 2011

  3. Chenhui Wang, Yukun Liu, Liwei Guo, Yong Yue and Carsten Maple (2011),An on-line distributed induction motor monitoring system based-on ARM and CAN bus, 6th International Symposium on Parallel Computing in Electrical Engineering (PARELEC 2011), 185-188, Luton, UK, 4-5 April 2011

  4. S Gu, CD Wu, Y Yue and C Maple, QNX based on human movement intention control research on assistive robot, 16th International Conference of Automation and Computer, Birmingham, 11 September 2010

  5. ZP Jiang, Y Yue, JJ Hou and DM Jiang, An integrated verb clustering model for task classification in active robot learning, 16th International Conference of Automation and Computer, Birmingham, 11 September 2010

  6. Haiyan Pan, Lanjiao Liu, Jia Xu, Hongmei Xu, Zhengxun Song, Zhankun Weng, Zhen Hu, Jin Zhang, Yong Yue, Dayou Li and Zuobin Wang, Measurement of Nanoscale Surface Patterns Produced by Two-beam Laser Interference Lithography, 2010 IEEE International Conference on Mechatronics and Automation (ICMA 2010), 4-7 August 2010, Xi'an, China

  7. D Fletcher, Y Yue and M Al-Kader, Challenges and perspectives of procedural modelling and effects, 10th International Conference on Information Visualisation, London, 27-29 July 2010

  8. H Wei, E Liu, X Zhao, NJB McFarlane and G J Clapworthy (2011), Web-Based 3D Visualisation for Biomedical Applications, Proc 8th International Conference on Biomedical Visualisation (MediVis 11), IEEE Computer Society, London, July 2011, pp 632-637

  9. Hui Wei, Enjie Liu, Gordon Clapworthy (2010), Interactive 3D Rendering to Assist the Processing of Distributed Medical Data, Proc First International conference on Intelligent Interactive Technologies & Multimedia (IITM 2010), ACM,INDIAN,December 2010, pp 120-127

  10. P. Karadimas, J. Zhang, “Angle of Arrival and Doppler Spectrum in the Presence ofGeneralized Two-Dimensional Anisotropic Scattering,” Progress in Electron. Research Symp. (PIERS), Marrakesh, Morocco, vol. 7, no. 5, pp. 496-550, Mar.2011. 

  11. P. Karadimas, J. Zhang, “A Generalized Analysis of Three-Dimensional AnisotropicScattering in Mobile Wireless Channels-Part I: Theory,” IEEE Veh. Technol.Conf. (VTC), Budapest, Hungary, May 2011. 

  12. Shah M A, Safdar G A, Maple C, DDH-MAC: A novel Dynamic De-Centralized Hybrid MAC protocol for Cognitive Radio Networks”. 10th IEEE Roedunet International Conference (RoEduNet), 2011, pp.1-6,  

  13. Safdar GA, Analysis of time correlated channel model for simulation of packet data networks IEEE LAPC 2011, November 2011 

  14. Notay J K, Safdar G A, A wireless sensor network based structural health monitoring system for an airplane

  15. 17th International Conference on automation and computing (ICAC 2011), September 2011 

  16. V Dyo, S. A. Ellwood, D. W. Macdonald, A. Markham, C. Mascolo, B. Pasztor, S. Scellato, N. Trigoni, R. Wohlers, K. Yousef (2010). Evolution and Sustainability of a Wildlife Monitoring Sensor Network Proceedings of the 8th ACM Conference on Embedded Networked Sensor Systems (Sensys 2010). Zurich, Switzerland. November 2010.  

  17. Viduto, V and Maple. C, Huang W., (2010), An analytical evaluation of network security modelling techniques applied to manage threats, International Conference on Broadband, Wireless Computing, Communication and Applications, pp 117-123, Japan, 2010.  

  18. Mohammed A, Huang W., Zhang J (2010), A Mathematical Programming Approach to Solve the Mobile WiMax Base Station Location Problem. Proceedings of the 16th International Conference on Automation and Computing, pp1-6, Birmingham, UK, 11 September 2010.  

  19. Viduto V, Huang W. Maple C (2010) A Novel Strategy for Optimal Security Investments. Proceedings of the 16th International Conference on Automation and Computing, pp244-249, Birmingham, UK, 11 September 2010.  

  20. French, T., and Huang, W. (2010) Intangible Trust Reqs., how to fill the gap?, Procs. Nordichi 2010: Proceedings of the First International Workshop on the Interplay between User Experience and Software Development. Rekjavick, Iceland, October 17th, 2010. CEUR Workshop Procs.. Vol. 656, 13-17. 

  21. E. Liu, J. Zhang, W. Ren. Adaptive DRX scheme for beyond 3G mobile handsets IEEE Globecom 2011, December 2011, Houston, USA 

  22. E. Liu, J. Zhang, W. Ren, A Counter-Driven Adaptive Sleep Mode Scheme for 802.16e Networks’ Proceedings: IEEE 73rd Vehicular Technology Conference (VTC 2011), 15-18 May 2011, Budapest 

  23. X. Zhang, D. Zhou, Z. Xiao, E. Liu, J. Zhang, A. A. Glasunov, Dynamic Group PCI Assignment Scheme,

  24. Proceedings: The 7th International Conference on Wireless and Mobile Communications, June, 2011, Luxembourg 

  25. M.E. Hashish and X. Feng, A Collective Study of the Challenges with Cloud Computing Forensics

  26. STAN 2011, July 2011, (IEEE Paper Award Winner) 

  27. X. Feng, Copyright Issues in UK, ASIS&T, Cork, Ireland, 2nd June 2011 

  28. X. Feng,Sensor Network Security prepared for CSCAuk 2012 

  29. X. Feng, Teaching Incidence Response Strategies 7th Annual Teaching Computer Forensics Workshop, UK 2011.  

  30. V Sipal, J Gelabert, C Stevens, B Allen, D Edwards, Impact of Confined Environments on WiMedia UWB Systems Loughborough Antennas and Propagations Conference, 2011, submitted 

  31. V Sipal, B Allen, D Edwards Optimisation of Low Power Radio-over-Fibre Links for UWB Systems IEEE Conference on UWB, 2011 

  32. V Sipal, J Gelabert, C Stevens, B Allen, D Edwards, Frequency Selectivity in Confined Environments European Conference on Antennas and Propagation, 2011 

  33. V Sipal, B Allen, D Edwards, Effects of Antenna Impulse Response on Wideband Wireless Channel Loughborough Antennas & Propagation Conference, November 2010  

  34. V Sipal, B Allen, D Edwards, Exploration and Analysis of Fade Depth Scaling, Loughborough Antennas & Propagation Conference, November 2010  

  35. V Sipal, B Allen, D Edwards, Exploration of Nakagami Fading in Ultrawideband Wireless Channels, IET Electronics Letters, April 2011, Volume 47, Issue 8, p.520–521

  36. V. C. Papamichael and P. Karadimas, “Performance Evaluationof Actual Multi-element Antenna Systems under Transmit Antenna Selection/Maximal Ratio Combining,” IEEE Ant. Wirel.Propag. Letters, vol. 10, 2011.

  37. Aydin M E, Kwan R, Wu J, Zhang J, (2011),Multiuser scheduling on the LTE downlink with simulated annealing”, In Proceedings of IEEE Vehicular Technology Conference, VTC Spring 2011, 15-18 May 2011,Budapest,Hungary,pp.1-5.

  38. Aydin M E, Bessis N, Asimakopoulou E, Xhafa F, Wu J , (2011) Scanning environments with swarms of learning birds: A computational intelligence approach for managing disasters”, In Proceedings of International Conference on Advanced Information Networking and Applications, AINA 2011, 22-25 March 2011, Singapore, pp. 332-339.

  39. Comşa, I S, Aydin M E, Zhang S, Kuonen P and Wagen J-F (2011) Reinforcement Learning based Radio Resource Scheduling in LTE-Advanced”, In   Proceedings of the 17th International Conference on Automation & Computing, Huddersfield, UK, 10 September 2011, pp. 233-238.

  40. Viduto V, Maple C and Huang W, (2010) An analytical evaluation of network security modeling techniques applied to manage threats, International Conference on Broadband, Wireless Computing, Communication and Applications, pp 117-123, Japan, 2010.  

  41. Mohammed A, Huang W and Zhang J (2010) A Mathematical Programming Approach to Solve the Mobile WiMax Base Station Location Problem. Proceedings of the 16thInternational Conference on Automation and Computing, pp1-6, Birmingham, UK, 11 September 2010.  

  42. Viduto V, Huang W and Maple C (2010) A Novel Strategy for Optimal Security Investments. Proceedings of the 16th International Conference on Automation and Computing, pp244-249, Birmingham, UK, 11 September 2010.  

  43. French T and Huang W (2010) Intangible Trust Reqs., how to fill the gap?, Procs. Nordichi 2010: Proceedings of the First International Workshop on the Interplay between User Experience and Software Development. Rekjavick, Iceland, October 17th, 2010. CEUR Workshop Procs.. Vol. 656, 13-17. 

  44. Liu BClapworthy G JDong F, Kolokotroni E and Stamatakos G S (2011) Accelerating Tumour Growth Simulations on Many-Core Architectures: A Case Study on the Use of GPGPU within VPH, Proc 8th International Conference on Biomedical Visualisation (MediVis 11), IEEE Computer Society, London, July 2011, pp 601-609

  45. Liu BClapworthy G J, Kolokotroni E, Stamatakos G S (2010) Using the GPU for Simulating patiotemporal Tumour Growth, 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation, Athens, Sept 2010

  46. Liu BClapworthy G JDong F and G Stamatakos G S (2010) Improving the Efficiency of the Computational Modelling of Tumour Growth by Use of the GPU, VPH2010 Conference, Brussels, Sept 2010

  47. Marias K, Sakkalakis V, Roniotis A, Wan S, Giatili S, Graf N, Bohle R, Messe E, Stenzhorn H, Kim Y-J, oveney P V, Zasada S J, Folarin A, Büchler P, Bardyn T, Bauer S, Reyes M, Clapworthy G J, Bily T, Bednar V, Karasek M, Franz A, Grewer R and Dionysiou D (2010) ContraCancrum: Clinically Oriented Translational Cancer Multilevel Modelling, VPH2010 Conference, Brussels, Sept 2010

  48. McFarlane N J BLin XZhao YClapworthy G JDong F, Radaelli A and Testi D (2010) Visualisation and Simulated Surgery of the Left Ventricle in VPH2, VPH2010 Conference, Brussels, Sept 2010

  49. Stamatakos G S, Dionysiou D, Giatili S, Kolokotroni E, Georgiadi E, Roniotis A, Sakkalis V, Coveney P V, Wan S, Manos S, Zasada S J, Folarin A, Büchler P, Bardyn T, Bauer S, Reyes M, Bily T, Bednar V, Karasek M, Graf N, Bohle R, Meese E, Kim Y-J, Stenzhorn H, Clapworthy G JLiu E, Sabczynski J and Marias K (2010) The ContraCancrum Oncosimulator: Integrating Biomechanisms Across Scales in the Clinical Context, 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation, Athens, Sept 2010

  50. Testi D, Larrabide I, Clapworthy G J, Aylward S, Frangi A, Hunter P and Viceconti M (2010) Multiscale Visualisation and Interaction, VPH2010 Conference, Brussels, Sept 2010

  51. Wang T, Manos S, Liu E, Zasada S J, Coveney P V and Clapworthy G J (2010) An ICT Environment for Patient-Specific Multiscale Cancer Modelling and Treatment, VPH2010 Conference, Brussels, Sept 2010

  52. Wei HLiu E and Clapworthy G J (2010) Interactive 3D Rendering to Assist the Processing of Distributed Medical DataProc International Conference on Intelligent Interactive Technologies and Multimedia (IITM 2010), pp 119-126, Allahabad (India), ACM Press, Dec 2010

  53. Wei HLiu EZhao XMcFarlane N J B and Clapworthy G J (2011) Web-Based 3D Visualisation for Biomedical ApplicationsProc 8th International Conference on Biomedical Visualisation (MediVis 11), IEEE Computer Society, London, July 2011, pp 632-637

  54. Zhou YClapworthy G JDong FZhang X, Chen W and Viceconti M (2010) iVolBrush: An Intelligent Interactive Tool for Efficient Volume Selection and Editing, Proc International Conference on Intelligent Interactive Technologies and Multimedia (IITM 2010), pp 231-235, Allahabad (India), ACM Press, Dec 2010

  55. Zhao YClapworthy G JTao YDong FWei H and Wang T (2011) CCVis: A Software Plugin for Unified Visualisation in ContraCancrum based on VTK Extensions, Proc 8th International Conference on Biomedical Visualisation (MediVis 11), IEEE Computer Society, London, July 2011, pp 610-615

  56. Yu L , Zhang S, Maple C (2010) QoS Support for Real-Time Traffic in Token-Based Wireless Networks: A Survey, In Proceedings: 16th International Conference on Automation & Computing, University of Birmingham, Birmingham, UK, 11 Sept. 2010, pp.25-30. ISBN 978-0-9555293-6-8.

  57. Conrad M (2011) Leaving the Lindens: Teaching in Virtual Worlds of other Providers, Proceedings of ReLIVE 2011 (to appear)

  58. Shukla M and Conrad M (2011) Second Life is not an IslandProceedings of the IADIS International Conference on e-Society, Avila, Spain, 10-13 March 2011.

  59. Conrad M and French T (2010) My Mouse My Music, Sounding Out 5, 2010, Bournemouth. 

  60. Shah M A, Safdar G A and Maple C (2011) DDH-MAC: A novel Dynamic De-Centralized Hybrid MAC protocol for Cognitive Radio Networks”. 10th IEEE Roedunet International Conference (RoEduNet), pp.1-6, doi: 10.1109/RoEduNet.2011.5993685

  61. Safdar G A (2011) Analysis of time correlated channel model for simulation of packet data networks”. IEEE LAPC 2011, November 2011

  62. Notay J K, Safdar G A (2011) A wireless sensor network based structural health monitoring system for an airplane”. 17th International Conference on automation and computing (ICAC 2011), September 2011

  63. Lu J, Chen W and Keech M (2011), Exclusive Sequential Patterns and their Graphical Representation, ECDM ‘11 – IADIS European Conference on Data Mining, July 2011, Rome

  64. French T and Huang W (2010) Intangible Trust Reqs., how to fill the gap? ', Procs. Nordichi 2010: Proceedings of the First International Workshop on the Interplay between User Experience and Software Development. , Reykjavík Iceland, October 17th, 2010. CEUR Workshop Procs.. Vol. 656, 13-17.

  65. Prakash E, Wood J, Li B, Clarke M, Smith G and Yates K (2011) Games Technology: Console Architectures, Game Engines and Invisible Interaction, Proc. of the 4th Annual International Conference on Computer Games, Multimedia and Allied Technology (CGAT 2011), Penang, Malaysia, 2011, ISBN: 978-981-08-8644-8, pages 103-108

  66. Muralikrishnan G and Prakash E (2011) 'Development of a System for Automatic Image Metadata Creation and Search in IEEE Security, Telecommunications and Networking (STAN) Conference 2011, Bedfordshire, UK [Best Paper Award]

  67. Wood J, Li B, and Prakash E (2011) Invisible Interaction for Games, Proc, of the Under the Mask: Games Conference, June 2011, Bedfordshire, UK.

  68. Fordah C and Prakash E (2011) Driving Games & Their Influence On Real-World Drivers, Proc, of the Under the Mask: Games Conference, June 2011, Bedfordshire, UK.


List of Current Students in IRAC


Number

First Name

Last Name

Mode

Start Date

Expected End Date

Programme

Director of Studies

412263

EJAZ

AHMED

PT

01-Feb-07

31-Jan-13

PhD

NBESSIS

710939

XIAO

GUO

FT

01-Oct-07

30-Sep-11

PhD

DLI

99113575

MARCIA

GIBSON

FT

11-Aug-08

10-Aug-12

PhD

MCONRAD

814097

THAIER

HAMID

PT

10-Oct-08

09-Oct-14

PhD

CMAPLE

817273

AMIR

ARYANPOUR

PT

01-Dec-08

30-Nov-14

PhD

SYAN

421993

DAVID

FLETCHER

FT

01-Dec-08

30-Nov-12

PhD

YYUE

502701

LIVIJA

JAKAITE

FT

01-Apr-09

31-Mar-13

PhD

VSCHETININ

821351

YUKUN

LIU

PT

01-Jun-09

31-May-15

PhD

YYUE

508405

ABDULLAHI

MOHAMMED

FT

04-Aug-09

03-Aug-13

PhD

WHUANG

917429

CHENG

FANG

FT

01-Sep-09

31-Aug-13

PhD

JZHANGELIU

99139772

XU

ZHANG

FT

17-Sep-09

16-Sep-13

PhD

ELIU

99136611

MITUL

SHUKLA

PT

01-Oct-09

31-Jul-13

PhD

MCONRAD

917544

WASAN

MEHDI

PT

05-Oct-09

04-Oct-15

PhD

FDONG

921495

VALENTINA

VIDUTO

FT

05-Oct-09

04-Oct-13

PhD

WHUANG

909074

TIAGO

HENRIQUES

PT

10-Nov-09

01-May-12

MSc

CMAPLE

917536

ABDULLAH

AL AULAMIE

FT

24-Nov-09

23-Nov-13

PhD

AMANSOUR

917432

SHYAM BABU

MAHATO

FT

01-Dec-09

30-Nov-13

PhD

JZHANGBALLEN

813985

MUHAMMAD

ASGHAR

FT

21-Dec-09

20-Dec-13

PhD

FHUSSAIN

814766

OMAR HAMAD

ALKETBI

FT

14-Jan-10

13-Jan-14

PhD

VSCHETININ

717146

RAVIKANTH

VARAGANTI

FT

14-Jan-10

13-Jan-14

PhD

VSCHETININ

922012

MUNAM

SHAH

FT

22-Jan-10

21-Jan-14

PhD

GSAFDAR

814088

TAO

CAO

FT

08-Mar-10

07-Mar-14

PhD

DLI

711271

BEISHENG

LIU

FT

08-Mar-10

07-Mar-14

PhD

DLI

924730

SHUANG

GU

FT

15-Mar-10

14-Mar-14

PhD

YYUE

922959

HUSSEIN

SHAABAN

FT

27-May-10

26-May-14

PhD

CMAPLE

813082

RAYMOND

BROWN

FT

01-Jun-10

31-May-14

PhD

CMAPLE

925493

NAVEED

AHMED

FT

01-Jul-10

30-Sep-11

MSc

SZHANG

926612

MAURIZIO

CAON

FT

08-Jul-10

07-Jul-14

PhD

YYUE

926649

XIA

ZHAO

PT

13-Jul-10

12-Jul-16

PhD

ELIU

813839

AHMED MOHAMMED

AL KAABI

FT

04-Oct-10

03-Oct-14

PhD

CMAPLE

912044

MONIPHIA

HEWLING

FT

04-Oct-10

03-Oct-14

PhD

PSANT

710638

WAJID

KHAN

PT

04-Oct-10

03-Oct-16

PhD

NBESSISFHUSSAIN

1030041

IOAN

COMSA

FT

23-Nov-10

22-Nov-14

PhD

SZHANG

99079545

GERAINT

WILLIAMS

PT

26-Nov-10

25-May-13

MSc

CMAPLE

503312

TESS

CROSBIE

PT

30-Nov-10

29-Nov-16

PhD

TFRENCH

925857

OBAID

ALMALKI

FT

14-Jan-11

13-Jan-15

PhD

YDUAN

1030741

ENSER

EKSI

PT

31-Jan-11

30-Jan-17

PhD

MAYDIN

1033509

ABDULCELIL

KILINC

PT

31-Jan-11

30-Jan-17

PhD

MAYDIN

1034047

FAISAL

QURESHI

FT

04-Feb-11

04-Feb-15

PhD

VDYO

1034121

WEI

LI

FT

16-May-11

15-May-15

PhD

YZHANG01

1024056

MUHAMMAD

ABBASI

FT

21-Jun-11

20-Jun-15

PhD

IFROMMHOLZ

 

in exam period

















Professor Edmond Prakash

LIRANS Institute of Research in the

Applied Natural Sciences

Over the reporting period LIRANS has enjoyed significant increase of fulltime staff numbers which has led to increased outputs of research activities. This has also led to ongoing discussions of a new institute’s name and structure, the outcome of these discussions will be reported in due course.


LIRANS currently consists of 19 fulltime academic staff and 12 visiting professors and fellows. The structure and research areas over the reporting period are detailed below (names of group leaders are underlined):
Cell and Cryobiology Research Group

(Prof Tiantian Zhang, Prof David Rawson, Dr Emma Spikings, Tiziana Zampolla)


Sensor Research Group

(Dr Barry Haggett, Prof David Rawson, Dr Roberto Andres, Dr Simon Bloxham, Ms Gowri Depp)


Biomedicine and Nutrition Research Group

(Prof Jan Domin, Dr Bushra Ahmed, Dr Robin Maytum, Dr John Reynolds, Dr Shaobo Zhou, Dr Zheying Zhu, Dr Adam Paige, Dr Arthur Hosie, Dr Barbara Guinn, Dr Guy Grant, Dr Louisa Vincini)
Environmental Monitoring Research Group

(Prof Prasad Sreenivasaprasad, Prof James Crabbe, Prof Angus Duncan, Dr Rick Stafford)




Research activities

New External appointments/activities
Crabbe MJC

Appointed member of Review Panel of the Journal of Global Citizenship & Equity Education

Continues as Editor of Computational Biology and Chemistry, and has been appointed a member of the Editorial Board of the Journal of Marine Science: Research and Development.

Elected as a corporate member of the Council of the Institute of Marine

Appointed as a member of the NERC steering committee of the Coral Reef Aquarist Network (CARN).

Appointed as a Patron of Coral Cay Conservation.

Member of international advisory board, International Interdisciplinary Science Conference, Delhi, November. Engineering, Science & Technology (IMarEST).
Guinn BA

Memberof the Executive Committee of the International Society for the Cell and Gene Therapy of Cancer

Editor-in-Chief of Biomarkers in Cancer, Associate Editor of Immunotherapy Insights. And on the editorial boards of BioMarker Insights, The Open Biomarkers Journal., The Open Cancer Immunology Journal, The Open Tissue Engineering & Regenerative Medicine Journal and the World Journal of Clinical Oncology.

External examiner for two PhD students in the School of Cancer Sciences, University of Birmingham and the BioSciences Institute, University College Cork, Ireland.

Holds two patents which are being considered as part of a licensing package by three international companies.

Reviewer of more than 50 journals as well as 5 national and international granting bodies.

Advisory Board Member for Arrowhead’s 2012 Cancer Vaccines Conference

Honorary senior research fellow at the University of Southampton and King’s College London.

Elected member of European Society of Gene and Cell Therapy, The British Science Association and British Society for Haematology Science sub-committee.
Haggett B

Grant Referee for NERC


Hosie AH

Grant reviewer for Austrian Science Fund (FWF).


Paige AJW

Grant Referee for the Association of International Cancer Research,2010.

Honorary Visiting Lecturer, Imperial College London.

Reviewer for BMC Cancer, 2010.

Reviewer for the British Journal of Cancer, 2010.

Reviewer for Virchows Archiv, 2010.


Reynolds J

Fellow of the Higher Education Academy (FHEA), June 2011.

External examiner for PhD at University College London.

Member of the Editorial Board of the Journal Fibrogenesis and Tissue Repair.

Scientific Representative on the Academic Affairs Committee, the Education and Training committee and the Research Committee of the Renal Association.

Chairman of the Renal Scientist’s Working Party and the Scientific representative on the Executive Committee of the Renal Association.

Honorary Senior Research Fellow, Imperial College London. January 2011.

Organising committee member and session chair at the British Renal Society/Renal Association annual conferences in Manchester, May 2010 and Birmingham, June 2011.

Organising committee member and session chair at the Entente Cordiale in Paris, February 2011.

Reviewer for The Journal of Clinical Investigation, Clinical and Experimental Immunology, The Journal of the American Society of Nephrology, Kidney International, Nephrology, Dialysis and Transplantation and the International Journal of Experimental pathology.


Sreenivasaprasad S.

Invited to evaluate a PhD thesis by the QIAM University-NIBGE, Pakistan.

Continues to serve as Member, Board of PhD thesis examinations, National Institute of Biotechnology and Genetic Engineering (NIBGE), Pakistan.

Reviewer for European Journal of Plant Pathology.

Reviewer for Journal of Phytopathology (Wiley-Blackwell).

Reviewer for Plant Pathology (British Society for Plant Pathology).


Zampolla T

Reviewer for: Journal of Animal Reproduction Science (2005). Cryoletters (2010), Cryobiology (2011).


Zhang T

Elected Fellow of Society of Biology (2010-).

Member of Editorial Board for Journal of Aquaculture Research (2010-).

Assistant Editor of CryoLetters and Editorial Board member of Animal Reproduction Science.

Organising Committee Member and Session Chair at Society for Cryobiology Annual Conference, Cryo2011, Oregon USA, Sept 2011. Organising Committee Member and Session Chair at Society for Cryobiology Annual Conference, Cryo2010, Bristol UK, Sept 2010.

PhD Supervisor, Federal University of Rio Grande do Sul, Brazil (2010-).

Vice President of Chinese Life Science Society UK (2011-). Elected Fellow of Chinese Life Science Society UK (2010-).
Zhou S

Reviewer of Proteome Science. (2011).



Research Output
Books and chapters


  1. Chester DK, Duncan AM, Sangster H (2010) Religion, faith communities and disaster. Routledge Handbook on Natural Hazards (eds J-C Gaillard & B Wisner).

  2. Crabbe MJC (2011) Global warming and coral reefs: from mitigation to geoengineering. In: (Ed: J.M. Cossia) Global Warming in the 21st Century. Nova Science Publishers, New York, USA. Pp 105-115.

  3. Hennige SJ, Suggett DJ, Hepburn LJ, Pugsley A, Crabbe MJC and Smith DJ (2010) Coral reefs of the Wakatobi: Processes of reef growth and loss. In: (Ed: J. Clifton, R.K.F. Unsworth and D.J. Smith) Marine Research and Conservation in the Coral Triangle: The Wakatobi National Park. Nova Science Publishers, New York, USA. Pp 27-44.

  4. Zheying Z, Robert JE Application of proteomics to study mechanism of toxicity and dose-response relationship of chemical exposure. Handbook of SystemsToxicology, p255-p264, published by John Wiley & Sons,January 2011.



Refereed journal publications


  1. Anil S, Ghafari F, Zampolla T, Rawson DM and Zhang T (2011). Studies on cryoprotectant toxicity to zebrafish (Danio rerio) ovarian tissue fragments. Cryoletters, 32 (1) 40-50.

  2. Coutinho R, Chester DK, Wallenstein N, Duncan AM (2010). Responses to, and the short and long-term impacts of the 1957/1958 Capelinhos volcanic eruption and associated earthquake activity on Faial, Azores. Journal of Volcanology & Geothermal Research 196, 265-280.

  3. Crabbe MJC (2011). Coral resilience on Caribbean reefs. Underwater Technology In the Press.

  4. Crabbe MJC (2011). Scleractinian coral population size structures and growth rates: Response. Marine Environmental Research. 71, 147-148.

  5. Desai K, Spikings E, and Zhang T (2011). Effect of chilling on sox2, sox3 and sox19a gene expression in zebrafish (Danio rerio) embryos, Cryobiology, in press.

  6. Desai K, Spikings E, T. Zhang (2011). Effect of chilling on sox2, sox3 and sox19a gene expression in zebrafish (danio rerio) embryos. Cryobiology, in press.Eakin CM, Morgan JA, Heron SF, Smith TB, Liu G, Alvarez-Filip L, Baca B, Bartels E, Bastidas C, Bouchon C, Brandt M, Bruckner A, Bunkley-Williams L, Cameron A, Causey BD, Chiappone M, Christensen TRL, Crabbe MJC, Day O, de la Guardia E, Díaz-Pulido G, DiResta D, Gil-Agudelo DL, Gilliam D, Ginsburg R, Gore S, Guzman HM, Hendee JC, Hernández-Delgado EA, Husain E, Jeffrey CFG, Jones RJ, Jordán-Dahlgren E, Kaufman L, Kline DI, Kramer P, Lang JC, Lirman D, Mallela J, Manfrino C, Maréchal J-P, Marks K, Mihaly J, Miller WJ, Mueller EM, Muller E, Orozco Toro CA, Oxenford HA, Ponce-Taylor D, Quinn N, Ritchie KB, Rodríguez S, Rodríguez Ramírez A, Romano S, Samhouri JF, Sánchez JA, Schmahl GP, Shank B, Skirving WJ, Steiner SCC, Villamizar E, Walsh SM, Walter C, Weil E, Williams EH, Woody Roberson K, and Yusuf Y (2010) Caribbean Corals in Crisis: Record Thermal Stress, Bleaching, and Mortality in 2005. PLOS ONE 5(11), e13969. doi:10.1371/journal.pone.0013969

  7. Favé G, Beckmann M, Lloyd AJ, Zhou S Harold G, Lin W, Tailliart K, Draper J Mathers J (2011). Characterization and control of inter-individual variability to aid measurement of metabolomic changes in response to food ingestion. (Metabolomics, 2011,

  8. Guinn BA, Casey G, Möller MG, Kasahara N, Peng KW and Tangney M (2010). International Society for the Cell and Gene Therapy of Cancer 2009 Annual meeting held in Cork, Ireland. Human Gene Therapy, 21, 9-26.Guinn, B.A, Lee C.H, Richardson D. and Orchard K. (2011). Expression of CD66 in non-Hodgkin lymphomas and multiple myeloma. In Press, European Journal of Haematology.

  9. Huang M, Grant GH and Richards WG (2011). Binding Modes of Diketo-Acid Inhibitors of HIV-1 Integrase: A Comparative Molecular Dynamics Simulation Study. J. Mol. Graphics Modelling, 29, 956–964(2011).

  10. Huggins DJ, Mckenzie GJ, Robinson DD, Narvaez AJ, Hardwick B, Roberts-Thomson M, Venkitaraman AR, Grant GH and Payne MC (2010). “Computational Analysis of Phosphopeptide Binding to the Plo-Box Domain of the Mitotic Kanse PLK1 using Molecular Dynamics Simulation” PLoS Computational Biology [DOI: 10.1371/journal.pcbi.1000880].

  11. Jin K, Xue C , Qian J, Zhu Y, Yang Z, Yonezawa T, Crabbe MJC, Cao Y, Hasegawa M and Zheng Y (2011). Why does the giant panda eat bamboo? A comparative analysis of appetite-reward-related genes among mammals. PLOS ONE 6 In the press.

  12. Lee CH, Guinn BA, Brooks SE, Richardson D and Orchard K (2010). CD66a (CEACAM1) is the only CD66 variant expressed on the surface of plasma cells in multiple myeloma: a refined target for radiotherapy trials. British Journal of Haematology, 149, 795-797.

  13. Lin C, Zhang T, Kuo FW, Tsai S (2011). Studies on oocytes chilling sensitivity of two gorgonian coral species (Junceella juncea and Junceella fragilis). Cryoletters, 32 (2), 141-147.

  14. Lukman S, Bui JM and Grant GH (2010). Unraveling Evolutionary Constraints for Multi-domain Proteins: A Heterogeneous Conservation in Dynamics of the Poly-Ig Domains of the I-Band Titin. FEBS Lett, 584, 1235–1239.

  15. Lukman S, Grant BJ, Gorfe AA, Grant GH and McCammon JA (2010). The distinct conformational dynamics of K-Ras and H-Ras A59G. PLoS Comput. Biol. 6, e1000922 .

  16. Paige AJW, Zucknick M, Janczar S, Paul J, Mein CA, Taylor KJ, Stewart M, Gourley C, Richardson S, Perren T, Ganesan TS, Smyth JF, Brown R, and Gabra H (2010). WWOX Tumour Suppressor Gene Polymorphisms And Ovarian Cancer Pathology And Prognosis. European Journal of Cancer, 46 (4), p818.

  17. Prell J, Bourdès A, Kumar S, Lodwig E, Hosie AH, Kinghorn S, White J, Poole P (2010). Role of symbiotic auxotrophy in the Rhizobium-legume symbioses., PloS one, 5 (11), e13933.

  18. Reynolds J, Sando GS, Marsh O, Salama AD, Cook HT, Pusey CD. Manipulation of the PD1/PDL1 negative T cell costimulatory pathway in treatment of established experimental autoimmune glomerulonephritis. Nephrol Dial Transplant (in press).

  19. Reynolds J. (2011) Strain differences and the genetic basis of experimental autoimmune anti-glomerular basement membrane glomerulonephritis. Int J Exp Pathol 10:1365-2613.

  20. Severi E, Hosie AH, Hawkhead JA, Thomas GH (Mar 2010). Characterization of a novel sialic acid transporter of the sodium solute symporter (SSS) family and in vivo comparison with known bacterial sialic acid transporters., FEMS microbiology letters, 304 (1), 47-54

  21. Smits E, Lee C, Hardwick N, Brooks SE, van Tendeloo VFI, Orchard K and Guinn BA (2011). Clinical evaluation of cellular immunotherapy in acute myeloid leukaemia. Cancer Immunology, Immunotherapy, 60, 757-769.

  22. Spikings E, Zampolla T, Rawson DM, Wang Y, Zhang T (2011). Effect of methanol on mitochondrial organisation in zebrafish (Danio rerio) ovarian follicles. Theriogenology, in press.

  23. Szymanski M, Porter R, Dep GV, Wang Y and Haggett BGD (2011). Silver nanoparticles and magnetic beads with electrochemical measurement as a platform for immunosensing devices. Phys. Chem. Chem. Phys., 13, 5383 – 5387, 2011.

  24. Tsai S, Spikings E, Huang IC and Lin C (2011). Study on the mitochondrial activity and membrane potential after exposing later stage oocytes of two gorgonian corals (Junceella juncea and Junceella fragilis) to cryoprotectants. Cryoletters 32(1): 1-12.

  25. Tsai S, Spikings E, Hwang CC and Lin C (2010). Effects of the controlled slow cooling procedure on freezing parameters and ultrastructural morphology of Taiwan shoveljaw carp (Varicorhinus barbatulus) sperm. Aquatic Living Resources 23: 119-124

  26. Umansky V and Guinn BA (2010). ESCII - PIVAC meeting “Recent advances in cancer immunotherapy with an emphasis on cancer vaccines” held in Athens. 9-11th October 2008. Cancer Immunology, Immunotherapy, 59, 635-640.

  27. Wang Jj, Li Qw, Ou Yt, Han Zs, Li Q, Wang PH, Zhou S (2011). Inhibition of tumor growth by recombinant adenovirus containing human lactoferrin through inducing tumor cell apoptosis in mice bearing emt6 breast cancer Arch Pharm Res.34, (6), 987-995.

  28. Zampolla T, Spikings E, Rawson DM and Zhang T (2011). Cytoskeleton proteins F-actin and tubulin distribution and interaction with mitochondria in the granulosa cells surrounding stage III zebrafish (Danio rerio) oocytes”. Theriogenology, 76, 1110–1119.

  29. Zampolla T, Spikings E, Rawson DM, Zhang T (2011). Impact of methanol and cryopreservation on metabolic activity and cytoskeleton proteins in zebrafish (Danio rerio) ovarian fragments. Cryoletters, in press



Submitted manuscripts


  • Reynolds J, Cook PR, Behmoaras J, Smith J, Bhangal G, Tadros S, Tee J, Salama AD, Evans DJ, Aitman TJ, Cook HT, Pusey CD. Genetic susceptibility to experimental autoimmune glomerulonephritis in the WKY rat. (submitted to Kidney International)




  • Reynolds J, Weschler J, Marshall D, Shaw S, Gelinas RE, Cook HT, Pusey CD. Effect of anti-IL6 monoclonal antibody therapy in experimental autoimmune glomerulonephritis in the CD1 mouse. (submitted to J Am Soc Nephrol).




  • Svenvan E, Zheying Z, John C, Magdalena G, Christine G, Ellen F and Robert JE
    Proteomicprofiling of xenobiotic metabolising enzymes in human skin and human skin models.Journal of Investigative Dermatology


Other publications


  • Anil S, Zampolla T and Zhang T (2011). Development of in vitro culture method for zebrafish ovarian tissute fragments. Cryobiology, in press. [Abstract]




  • Anil S, Ghafari F, Zampolla T, Rawson DM and Zhang T (2010). Studies on cryoprotectant toxicity to zebrafish (Danio rerio) ovarian tissue fragments. Cryobiology 61 (3), 384. [Abstract]




  • Boluarte JC, Bentley Y, Crabbe MJC and Christopher M (2011).Using multiple case studies to determine company attitudes to carbon emissions reduction in logistics operations. Abstracts of the 18th European Operations Management Association Conference, 10.




  • Brooks S, Bonney S, Lee C, Sigurdardottir D, Rammensee HG, Mufti GJ, Elliott T, Orchard K. and Guinn BA (2011). The pMHC array demonstrates that untouched T cell populations from presentation myeloid leukaemia patients can recognize multiple tumour antigens. British Journal for Haematology, 153, 70.

  • Brooks S, Bonney S, Smits E, Lee C, Sigurdardottir D, Rammensee HG, Van Tendeloo V, Mufti GJ, Elliott T, Orchard K and Guinn BA. (2011).The pMHC array demonstrates that untouched T cell populations from presentation myeloid leukaemia patients can recognize a range of tumour antigens. Submitted to the ESCGT and BSGT Collaborative Congress, 2011.




  • Brooks S, Bonney S, Smits E, Lee C, Sigurdardottir D, Rammensee HG, Van Tendeloo V, Mufti GJ, Elliott T, Orchard K. & Guinn BA (2011). Simultaneous analysis of untouched T cell populations in presentation myeloid leukaemia patients using the pMHC array. Submitted to the University of Southampton / Southampton Universities Hospital Trust Translational Clinical Research Conference.




  • Brooks S, Lee C, Sigurdardottir D, Rammensee HG, Mufti GJ, Elliott T, Orchard K. and Guinn BA (2010). Simultaneous analysis of specific T cell populations in patients using the pMHC array. University of Southampton / Southampton Universities Hospital Trust Translational Research Conference.

  • Brooks S, Lee C, Sigurdardottir D, Rammensee HG, Mufti GJ, Elliott T, Orchard, K. and Guinn BA (2010). Simultaneous analysis of specific T cell populations in leukaemia patients using the pMHC array. Cancer Sciences Division Annual meeting.

  • Brooks SE, Lee CH, Sigurdardottir D, Wang C, Ramensee HG, Mufti GJ, Elliott TJ, Orchard K and Guinn BA (2010). Simultaneous analysis of specific T cell populations in acute leukaemia patients using the pMHC array. British Journal for Haematology, 149, 73-74.

  • Chester DK and Duncan AM (2011). Earthquakes, volcanoes and God: Theological perspectives on Natural Disaster. The Society for Earthquake and Civil Engineering Dynamics 22 (4), 1-6.




  • Crabbe MJC (2010). Computational Biology approaches to plant metabolism and photosynthesis: applications for corals in times of climate change and environmental stress. Abstracts of the 15th International Congress of Photosynthesis, 175.




  • Crabbe MJC (2010). Computational Biology Modelling in Research and Education. World Conference on Information Technology, 2.




  • Crabbe MJC (2010). Environmental effects on coral growth and recruitment in the Caribbean. Abstracts of the 13th Reef Conservation UK meeting, 13.




  • Crabbe MJC (2010). Intellectual leadership and transdisciplinarity. Society for Research into Higher Education Annual Research Conference Abstracts, L1; 8-9.

  • Desai K, Spikings E, Rawson DM and Zhang T (2010). Studies on impact of chilling on sox gene expression in zebrafish (Danio rerio) embryos. Cryobiology 61(3), 389. [Abstract]




  • Desai K, Spikings E and Zhang T (2011). Studies on the role of hsp47 and hsp90 in zebrafish (Danio rerio) embryos under chilled conditions. Cryobiology, in press. [Abstract]




  • Desai K, Spikings E, Rawson D M and Zhang T (2010). Studies on impact of chilling on sox gene expression in zebrafish (Danio rerio) embryos. Cryobiology 61(3), 389.




  • Hardwick NR, Buchan S, Rice J, Mufti GJ, Stevenson FK and Guinn BA (2010). A novel PASD1 analogue peptide which can enhance anti-leukaemia T cell responses in vitro and in vivo. Cancer Sciences Division Annual meeting.




  • Hardwick NR, Buchan S, Ingram W, Rice J, Mufti GJ, Stevenson FK and Guinn BA (2010). Development of a novel DNA vaccine encorporating a PASD1 analogue peptide which can enhance anti-leukaemia T cell responses in vitro and in vivo. British Journal for Haematology, 149, 73.




  • Slesser AAP, Paige AJW, Gabra H, and El-Bahrawy M (2010). P3: The expression of WWOX in pancreatic adenocarcinoma. Abstracts of the 6th International conference of Clinical Cancer Prevention, 2010, St.Gallen, Switzerland. European Journal of Cancer Supplements, 8 (2), p10. [Abstract]




  • Spikings E, Vishnolia K, Rawson DM and Zhang T (2010). Effect of methanol and chilling on expression of mitochondrial DNA replication factors and mitochondrial DNA replication in zebrafish embryos. Cryobiology 61(3), 391-392.




  • Zampolla T, Spikings E, Zhang T and Rawson DM (2010). Investigation of methanol impact on mitochondrial transport and cytoskeleton proteins in zebrafish (Danio rerio) stage III ovarian follicles. Cryobiology 61(3), 385.




  • Zhang T (2011). Cryopreservation of fish gametes and it’s application in aquaculture and conservation. Cryobiology, in press. [Abstract]


Conference publications /invited lectures


  • Anil S, Zampolla T and Zhang T. Cryo2011 48th Annual Meeting of the Society for Cryobiology. Oregon, USA, July 2011. Development of in vitro culture method for zebrafish ovarian tissue fragments.




  • Chester DK and Duncan AM Reconstructing the impact of historic earthquakes and volcanic eruptions, and the important lessons these hold for improving resilience to future geophysical events. British Society for Geomorphology Ann. Conf., University of Liverpool, June 2011.




  • Crabbe MJC Invited Speaker (paid for) at International Conference on Marine Biology, Cairns, Australia, August 2011.




  • Crabbe MJC Invited speaker at University of Sydney, University of New South Wales, Macquarie University, and University of Queensland.




  • Crabbe MJC Invited plenary speaker (paid for) at the World IT conference, Istanbul, Turkey.




  • Desai K, Spikings E and Zhang T (2011) Effect of Chilling on sox2, sox3 and sox19a Gene Expression in Zebrafish (Danio rerio) Embryos Society for Low Temperature Biology Symposium 2011, Linnean Society, London.




  • Desai K, Spikings E and Zhang T. Cryo2011 48th Annual Meeting of the Society for Cryobiology. Oregon, USA, July 2011. Studies on the role of hsp47 and hsp90 in zebrafish (Danio rerio) embryos under chilled conditions.




  • Desai K, Spikings E and Zhang T. Society of Low Temperature Biology Symposium 2011 ‘Regenerative Medichine and Cryobiology’. London, UK, March 2011. Effect of chilling on sox2, sox3 and sox9 gene expression in zebrafish (Danio rerio) embryos.




  • Desai K, Spikings E and Zhang T (2011) Studies on the role of hsp47 and hsp90 in zebrafish (Danio rerio) embryos under chilled condition. Cryo 2011 48th Annual Meeting of the Society for Cryobiology 2011. Oregon, USA.




  • Ghafari F. Spikings E., Rawson DM. and Zhang T Controversies in Cryopreservation of Stem Cells, Reproductive Cells, Tissues and Organs. Valencia, Spain, April 2010. Effect of cryoprotectant and chilling on oxidative stress in stage I zebrafish (Danio rerio) ovarian follicles




  • Grant GH Principal organiser of The 50th Anniversary Symposium of the British Biophysical Society. Robinson College, Cambridge, July 16th-18th, 2010.




  • Guinn BA (2010) A new target for cancer immunotherapy. Cellular and Molecular Research at the National Cancer Centre Singapore, Division of Cellular and Molecular Research, Singapore.




  • Guinn BA (2010) A novel target for the immunotherapy of acute myeloid leukaemia. The 1st Conference of the Czech Society of Gene and Cell Therapy with international participation. Mikulov Castle, Czech Republic.




  • Guinn BA (2010). PASD1 is a new target for cancer immunotherapy. Universitätsklinikum Tübingen, Interfakultäres Institut für Zellbiologie, Abteilung Immunologie, Tübingen, Germany.




  • Guinn BA (2010). PASD1, a new cancer-testis antigen for myeloid leukaemia immunotherapy. Royal Free and University College London Medical School, London, England.




  • Guinn BA (2011). Simultaneous analysis of specific T cell populations in leukaemia patients using the pMHC array. Vaccine and Infectious Disease Institute, University of Antwerp Laboratory of Experimental Hematology, Antwerp University Hospital, Belgium.




  • Hardwick NH, Buchan S, Ingram W, Vittes G, Rice J, Mufti GJ, Farzaneh F, Stevenson FK and Guinn BA (2010). A new DNA vaccine for acute myeloid leukaemia. BiT World Cancer Vaccine conference. Beijing, P.R. China. Speaker and Session chair for Track 5-3: Dendritic Cell Based Cancer Vaccines and Track 5-4: Vaccine Approaches to Immunotherapy and Clinical Trials. Invited speaker at European Renal Cell Study Group, Delphi, Greece March 2010




  • Rawson DM, Zhang T and Zampolla T. Diversity in Biobanking:Embracing Differences, Harnessing Commonalities. Annual Meeting of International Society of Biological and Envarionmental Repositories. Rotterdam, Netherlands, May 2010. Cryo-Banking of Cells and Tissues from Freshwater and Marine Fish in the UK Waters

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