International Evaluation of Finnish Computer Science


National and international collaboration



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4. National and international collaboration




4.1. National collaboration


List the national collaboration partners of the Unit. Collaborator refers to a person or a research team with whom the cooperation has either generated or is expected to generate within the next three (3) years one of the outcomes indicated in item 2.2. Types of collaboration include e.g. joint projects, researcher mobility. In "Field of science", give the main field of the collaborator (physics, chemistry, mechanical engineering etc.)



Organisation

Type of collaboration

Field of science

UNIVERSITIES
















University of Helsinki







Department of Comparative Religion: Dr. Risto Pulkkinen

Joint research

Linguistics: Linguistic population history

Department of Ecology and Systematics, Division of Population Biology, Professor Ilkka Hanski

Joint research

Ecology: meta-population dynamics

Department of Education, Professor Hannele Niemi

Joint Tekes project

Behavioral sciences

Department of English, CoE of Variation, Contacts, and Change in English: Professor Terttu Nevalainen

Joint research

Linguistics: Sequence analysis, structure discovery in high-dimensional data.

Department of Finnish Language and Literature: Professor Ritva-Liisa Pitkänen

Joint research, joint supervision of Ph.D. student.

Onomastics: discovery of co-location rules in complex point data

Department of Finno-Ugric Studies: Professor Ulla-Maija Kulonen,

Joint research

Linguistics: Linguistic population history

Department of Geology: Professor Mikael Fortelius


Joint projects. A Ph.D. student is funded by Professor Fortelius.

Ecology and Paleontology: Sequence analysis, structure discovery in high-dimensional data.

Department of History, Docent Tuomas Heikkilä

Joint research project

Field of science: Historical analysis, stemmatology

Department of Mathematics and Statistics: Professor Elja Arjas

Research cooperation

Computational statistics

Department of Medical Genetics







CoE on Disease Genetics, Academy Professor Leena Peltonen-Palotie


Exchange of personnel, joint projects, joint supervision of Ph.D. students

Genome structure: Sequence analysis, mining complex data.


Academy Professor Lauri Aaltonen


Joint research projects, exchange of researchers


Gene regulation: Gene regulatory motifs, effect of SNPs on regulation, regulatory networks


Professor Juha Kere

Joint research projects, exchange of researchers

Gene mapping: methods for complex diseases

Department of Physical Sciences, Division of Atmospheric Sciences, CoE on Atmospheric Composition and Climate Change: Professor Markku Kulmala

Joint research, jointly funded postdoc

Atmospheric data analysis: Mining complex data, structure discovery in high-dimensional data.

Department of Psychology: Dr. Pentti Laurinen

Joint projects and supervision of a PhD student (Ilmari Kurki)

Neuroinformatics: vision modelling: Data analysis for experimental visual psychophysics.

Drug Discovery and Development Technology Center: Professor Arto Urtti

Joint project

Gene regulation: Gene regulatory motifs

Haartman Institute, Department of Pathology, Laboratory of Cytomolecular Genetics: Professor Sakari Knuutila

Shared funding for a joint Ph.D. student, joint project

Genome structure: cytomolecular genetics

Helsinki Institute of Physics

Joint Tekes project on grid computing

Field: computer science

Institute of Biomedicine, Molecular and Cancer Biology Program, CoE in Translational Genome-Scale Biology:

Professor Jussi Taipale, Academy Professor Lauri Aaltonen



Joint research projects, exchange of researchers

Gene regulation: Gene regulatory motifs, effect of SNPs on regulation, regulatory networks.

Professor Tomi Mäkelä

Joint Tekes project on microarray data analysis

Bioinformatics

Institute of Biotechnology, CoE in Developmental Biology: Professor Irma Thesleff, Professor Jukka Jernvall

Joint research

Gene regulation: Gene regulatory motifs

Ecology and Paleontology: Sequence analysis, structure discovery in high-dimensional data.



Rolf Nevanlinna Institute

Joint EU project on statistical modeling of animal populations

Statistics

Faculty of Social Science, Department of Economics, Professor Klaus Kultti

Joint research

Microeconomics of Internet consumer behaviour

Helsinki University of Technology

Department of Computer Science and Engineering









Adaptive Informatics CoE at, Dr. Timo Honkela


Joint research


Language technology: Computational language modeling.

Professor Antti Ylä-Jääski, Professor Petri Vuorimaa, Professor Jorma Virtamo

Joint Tekes projects, adjunct professor (docent)

Mobile computing and communications, context-aware mobile systems

Professor Marko Nieminen

Professor Tapio Takala



Joint Tekes projects, joint research in EU projects

User interfaces, interaction research

Professor Samuel Kaski


Joint academy project on proactive information retrieval.

Joint EU project on information retrieval



Computer science


Brain Research Unit of the Helsinki, University of Technology, Dr. Simo Vanni


Dr. Hyvärinen is leader of an interdisciplinary brain research consortium funded by the Academy of Finland which includes this group and the one above

Neuroinformatics: Brain imaging in vision research.


Laboratory of Computational Engineering, Dr. Jukka Heikkonen

Joint Tekes projects


Computer science

Other universities







Helsinki School of Economics, Center for Knowledge and Innovation Research (CKIR), Dr. Ilpo Kojo

Joint Academy project on proactive information retrieval. Joint Academy project on data visualization

cognitive science, psychology

Center for Knowledge and Innovation Research (CKIR), Dr. Timo Saari

Joint projects on social media and media experience

User experience, psychologically adaptive media

Center for Knowledge and Innovation Research (CKIR), Dr. Niklas Ravaja

Joint EU project on gaming experience

User experience, game research

University of Kuopio

Department of Health Policy and Management

Professor Olli-Pekka Ryynänen


Joint Tekes project on analysis of medical patient records

Medical diagnosis

Oulu University Central Hospital: Dr. Vesa Kiviniemi




Neuroinformatics: Brain imaging data analysis methods.

University of Tampere







Department of Computer Sciences, Tampere Unit for Human-Computer Interfaces: Professor Kari-Jouko Räihä

Joint Tekes project on information retrieval


Computer science


Game Research Lab, Hypermedia Laboratory,

University of Tampere, Professor Frans Mäyrä



Joint Tekes project on social gaming

Digital media

Research Centre for Vocational Education, Professor Pekka Ruohotie

A joint Academy project on Computational Intelligence Techniques for Social Sciences

Social sciences

Graduate schools







Helsinki University of Technology

Department of Computer Science and Engineering



Joint graduate school: Helsinki Graduate School in Computer Science and Engineering (Hecse)

Core computer science

University of Helsinki, University of Turku, Helsinki University of Technology (3 universities, 4 departments/laboratories)

Joint graduate school: Graduate School in Biology, Bioinformatics and Biometry (ComBi)

Biology, Bioinformatics and Biometry

Helsinki University of Technology, Helsinki School of Economics

Joint graduate school: Graduate school of electronic business and software industry (GEBSI)

Digital economy, user interfaces

University of Tampere, Tampere University of Technology, Helsinki University of Technology, Helsinki School of Economics, University of Industrial Arts and Design

Joint graduate school: User-centric information technology (UCIT)

Interaction research, digital media

Public research institutes







Finnish Defence Forces, Catharina Candolin

Joint research

Finland

Finnish Forest Research Institute METLA: Professor Erkki Tomppo, Professor Kari Mielikäinen

Joint research

Forest research: Structure discovery in high-dimensional data, spatio-temporal data

Finnish IT Center for Science (CSC)

Joint research

Bioinformatics

Finnish Game and Fisheries Research Institute: Dr. Sakari Kuikka

Joint project on statistical analysis of Baltic salmon population

Biological and Environmental Sciences, statistics

Institute of Occupational Health: Dr. Sisko Anttila, Finnish

Shared funding for a joint Ph.D. student, joint project

Genome structure: cytomolecular genetics

National Board of Patents and Registration of Finland

Joint project on statistical analysis of patent texts

Computer science

National Public Health Institute (KTL), Department of Molecular Medicine:







Academy Professor Leena Peltonen-Palotie

Exchange of researchers, joint projects, joint supervision of Ph.D. students

Genome structure: Sequence analysis, mining complex data


Professor Jussi Taipale

Joint projects, exchange of researchers

Gene regulation: Gene regulatory motifs, effect of SNPs on regulation, regulatory networks.


Research Institute for the Languages of Finland (Kotus): Professor Ritva-Liisa Pitkänen, Dialect dictionary editor Ulla Takala

Joint research

Onomastics and dialectology: structure discovery in high-dimensional data

TEKES – Finnish Funding Agency for Technology and Innovation

R&D projects (funded by Tekes)

Computer science

VTT Technical Research Centre of Finland






Biotechnology: Professor Merja Penttilä, Professor Hans Söderlund, Dr. Matej Oresic

Joint projects


Bioinformatics: biological network analysis


Information technology: Professor Caj Södergård, Professor Charles Woodward, Dr. Leena Norros

Joint TEKES projects

Digital media, interaction research

Enterprises







3eyes Ltd, Finland: John Evans

Joint research and art installations

Context-awareness and privacy: Location Oriented Critical Arts

ABB

Joint project

Configuration problems

Accenture

Joint projects

Social media

AlmaMedia

Joint projects

News analysis, digital media

BayesIT

Joint project

Applications of data visualization

Biocomputing Platforms Finland Ltd

Joint research and funding

Bioinformatics

BookIT

Joint project

Mobile computing and communications

Codetoys

Joint project

Game research

Cyberell Ltd

Joint research and funding

Bioinformatics

Danisco Sugar Oy

Joint projects

Biotechnology

Digital Chocolate

Joint projects, research subcontracting

Digital media, game research

Elisa R&D

Pasi Kyheröinen, Annakaisa Häyrynen



Joint projects, joint research

Mobile computing and communications, context-aware mobile systems

Fibrogen Europe Oyj

Joint project

Biotechnology

Finnair

Joint project

Mobile computing and communications

Finnet

Joint projects

Mobile computing and communications

Futurice Oy

Joint development, research, consulting, prototyping

Social media

GeneOS Ltd

Joint research and funding

Bioinformatics

Helsinki University Press

Research, development, prototyping, consulting

Hybrid media

Idean research, Anu Kankainen

Joint research, joint TEKES projects

User interfaces, interaction research

Indagon

Joint project

Signal denoising

Jurilab Ltd

Joint research and funding

Bioinformatics

Keskuslaboratorio KCL

Research and subcontracting

Hybrid media

Kone Corporation

Joint project

Elevator configuration problems

Licentia Ltd

Joint research

Bioinformatics

LM Ericsson Oy/Ab

Joint project, joint research personnel


Mobile computing and communications, Context-aware mobile systems

M-Brain

Joint project

Text analysis

MediCel Oy

Joint projects

Biotechnology

Medipolis GMP Oy




Biotechnology

Medix Biochemica

Joint projects

Pharmacogenomics, genome structure and gene mapping

Mobidiag Oy

Joint project

Biotechnology

Nokia







Mobile Phones

Joint projects

Mobile computing and communications

Nokia Networks

Joint projects

Mobile computing and communications

Nokia Research Center

Joint projects

Ubiquitous and proactive computing; telecom­muni­cations;

Mobile computing and communications, real-time databases, operating systems;

Data analysis applications;

Context-aware mobile systems



Nokia Design, Jan Blom, Phil Lindberg

Joint research

User interfaces

Orion Pharma

Joint projects

Pharmacogenomics, genome structure and gene mapping

Palodexgroup

Joint project

Signal denoising

Panimolaboratorio – Bryggerilaboratorium, Oy

Joint projects

Biotechnology

Perkin-Elmer

Joint projects

Pharmacogenomics, genome structure and gene mapping

Profium

Joint projects

Social media

Roal Oy

Joint projects

Biotechnology

Sinebrychoff, Oy

Joint projects

Biotechnology

Solidtech

Joint project

Context-aware mobile systems

Starcut

Joint projects

Social media

StoraEnso

Joint project

Constrained optimization problems with respect to paper container packing

Sulake

Joint projects

Social media, game research

Suunto Oy

Joint project

Context-aware mobile systems

Swelcom

Joint projects

Social media

TeliaSonera Finland

Joint projects

Mobile computing and communications

Tietoenator

Joint projects

Service-oriented architecture, service composition, enterprise architecture development, and inter-enterprise computing
Mobile computing and communications
Optimization problems

Veikkaus

Joint projects

Social media

VTI Technologies

Joint project

Signal denoising

Whitelake Software Point Oy

Joint projects

Biotechnology

Wisane

Joint project

Medical patient records analysis

Yleisradio

Joint projects

Social media, peer-to-peer systems

Yliopistopaino

Joint projects

Hybrid media

Research Networks







Language Technology Research Network (LANTERN)

University of Helsinki, Departments of Linguistics and Computer Science; Helsinki University of Technology, Adaptive Informatics CoE; Lappeenranta University of Technology



Regular co-operation with language the technology industry cluster in Finland (e.g. AAC Global, Lingsoft, Sanako, Master's Innovations, Kielikone).


Language technology

National conferences and workshops organised by the unit

"New Everyday Information Society", a conference organized by HIIT and the Ministry of Communications and Transportation. March 1, 2006.

National conference with about 100 participants

Information society



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