Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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Score = 130 bits (327), Expect = 6e-029 Identities = 71/135 (52%), Positives = 93/135 (68%), Gaps = 9/135 (6%) Frame = -1
E+ KINEWLT VE+EMR TLA L+ E+ TE+ A S P+ Y+ WID+Y QLVVL+ Sbjct: 1692 EHPKINEWLTLVEKEMRVTLAKLLAESVTEVEIFGKATSIDPNTYITWIDKYQAQLVVLS 1751
AQ+ W+ +V+ AL++ G G DV VL +VE LN+LAD+VL + P R+K EHL+T Sbjct: 1752 AQIAWSENVENALSNVGGGGDVGPLQSVLSNVEVTLNVLADSVLMEQPPLRRRKLEHLIT 1811
ELVHQRDV R + S Sbjct: 1812 ELVHQRDVTRSLIKS 1826 Score = 91.3 bits (225), Expect = 4e-017 Identities = 42/59 (71%), Positives = 55/59 (93%) Frame = -3 Query: 880 LEVLAFEEIQRTLEKLAEMLTKIQKALGEYLERQRAAFPRFYFVGDEDLLEIIGNSKDL 704 ++VL + +QR+LE+LA++L KIQKALGEYLER+R++FPRFYFVGDEDLLEIIGNSK++ Sbjct: 1587 MDVLNIQGVQRSLERLADLLGKIQKALGEYLERERSSFPRFYFVGDEDLLEIIGNSKNV 1645 Score = 48.1 bits (113), Expect = 4e-004 Identities = 20/44 (45%), Positives = 33/44 (75%) Frame = -2 Query: 629 KIQKHLKKMFAGLAAFVLDEEKTTISGMASGEAEVVNFRKTISI 498 K+QKH KKMFAG+++ +L+E+ + + G++S E E V F+ +SI Sbjct: 1647 KLQKHFKKMFAGVSSIILNEDSSVVLGISSREGEEVMFKTPVSI 1690 >ref|NP_084514.1| dynein, cytoplasmic, heavy chain 1 [Mus musculus] gb|AAF91078.1| cytoplasmic dynein heavy chain [Mus musculus] sp|Q9JHU4|DYHC_MOUSE Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic dynein heavy chain) Length = 4644
Identities = 71/135 (52%), Positives = 93/135 (68%), Gaps = 9/135 (6%) Frame = -1
E+ KINEWLT VE+EMR TLA L+ E+ TE+ A S P+ Y+ WID+Y QLVVL+ Sbjct: 1692 EHPKINEWLTLVEKEMRVTLAKLLAESVTEVEIFGKATSIDPNTYITWIDKYQAQLVVLS 1751
AQ+ W+ +V+ AL++ G G DV VL +VE LN+LAD+VL + P R+K EHL+T Sbjct: 1752 AQIAWSENVENALSNVGGGGDVGPLQSVLSNVEVTLNVLADSVLMEQPPLRRRKLEHLIT 1811
ELVHQRDV R + S Sbjct: 1812 ELVHQRDVTRSLIKS 1826 Score = 91.3 bits (225), Expect = 4e-017 Identities = 42/59 (71%), Positives = 55/59 (93%) Frame = -3 Query: 880 LEVLAFEEIQRTLEKLAEMLTKIQKALGEYLERQRAAFPRFYFVGDEDLLEIIGNSKDL 704 ++VL + +QR+LE+LA++L KIQKALGEYLER+R++FPRFYFVGDEDLLEIIGNSK++ Sbjct: 1587 MDVLNIQGVQRSLERLADLLGKIQKALGEYLERERSSFPRFYFVGDEDLLEIIGNSKNV 1645 Score = 48.1 bits (113), Expect = 4e-004 Identities = 20/44 (45%), Positives = 33/44 (75%) Frame = -2 Query: 629 KIQKHLKKMFAGLAAFVLDEEKTTISGMASGEAEVVNFRKTISI 498 K+QKH KKMFAG+++ +L+E+ + + G++S E E V F+ +SI Sbjct: 1647 KLQKHFKKMFAGVSSIILNEDNSVVLGISSREGEEVMFKTPVSI 1690 ---------------------- gnl|ti|818415053 name:POAA-aab70g03.b1 mate_pair:818416395 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_780555.1| PREDICTED: similar to P protein [Strongylo... 53 1e-005 ref|NP_068679.1| pink-eyed dilution protein [Mus musculus] ... 53 2e-005 dbj|BAE03195.1| pink-eyed dilution [Rattus norvegicus] 53 2e-005 ref|XP_425579.1| PREDICTED: similar to P protein [Gallus ga... 50 1e-004 gb|AAT58049.1| P protein [Oryzias latipes] 49 2e-004 gb|AAT58048.1| P protein [Oryzias latipes] 49 2e-004 gb|ABB29299.1| OCA2 [Astyanax mexicanus] 49 2e-004 gb|AAT58047.1| P protein [Oryzias latipes] 49 2e-004 ref|NP_999259.2| P protein [Sus scrofa] >gi|70609806|gb|AAM... 49 2e-004 sp|Q8MIQ9|P_PIG P protein (Melanocyte-specific transporter ... 49 2e-004 >ref|XP_780555.1| PREDICTED: similar to P protein [Strongylocentrotus purpuratus] Length = 696 Score = 53.1 bits (126), Expect = 1e-005 Identities = 28/56 (50%), Positives = 33/56 (58%) Frame = +1
+S FIDNIP+TT MIP+I+ L E EL LPL PL W A G+ GG G Sbjct: 616 VSALASSFIDNIPFTTAMIPIILDLAEREELGLPLQPLVW----ALAFGACLGGNG 667 ---------------- gnl|ti|818416401 name:POAA-aab70g09.g1 mate_pair:818415059 (900 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_637239.1| hypothetical protein DDB0187421 [Dictyoste... 93 1e-017 dbj|BAD61825.1| calcium-binding EF hand protein-like [Oryza... 56 2e-006 ref|NP_067058.1| epidermal growth factor receptor pathway s... 54 6e-006 ref|XP_582810.2| PREDICTED: similar to Epidermal growth fac... 54 7e-006 ref|XP_877195.1| PREDICTED: similar to Epidermal growth fac... 54 7e-006 ref|XP_877104.1| PREDICTED: similar to epidermal growth fac... 54 7e-006 ref|XP_869048.1| PREDICTED: similar to Epidermal growth fac... 54 7e-006 ref|XP_876708.1| PREDICTED: similar to epidermal growth fac... 54 7e-006 ref|XP_876634.1| PREDICTED: similar to epidermal growth fac... 54 7e-006 ref|XP_541965.2| PREDICTED: similar to epidermal growth fac... 54 7e-006 >ref|XP_637239.1| hypothetical protein DDB0187421 [Dictyostelium discoideum] gb|EAL63730.1| hypothetical protein DDB0187421 [Dictyostelium discoideum] Length = 1196
Identities = 53/138 (38%), Positives = 77/138 (55%) Frame = +3
+P +Q++YY++LF+IAD D DGVIGLND++FF+ S L N +L + Sbjct: 7 VPPAQKVYYEELFQIADVDKDGVIGLNDASFFRNSMLSNDILRD---------------- 50
+WQLSD G L+ + FFVAL L+SLAQ G + LD ++ Sbjct: 51 --IWQLSDVNN-GYLNIDDFFVALKLVSLAQMGAPVTLDSIKL----------------- 90
+ +PPPKL D+PP++ D Sbjct: 91 IPVIPPPKLNDIPPLKND 108 Score = 40.4 bits (93), Expect = 0.085 Identities = 39/149 (26%), Positives = 58/149 (38%) Frame = +3 Query: 333 IPASQRLYYDQLFKIADADGDGVIGLNDSAFFKKSGLPNAVLGEVFLILSFLFRYIS*YF 512 IP +R+ Y+ LF + G G F+KSGL N L Sbjct: 219 IPPPERIIYEDLFN-KNQQGGIFTGSQAKVLFEKSGLSNQDL------------------ 259
+W L+D+ + LD+ F +A+ LIS ++GK L L L+ + S Sbjct: 260 KLIWDLADHNQEQVLDKHKFVIAMFLISQRKKGKEL-----------PQSLPQLLLESS- 307
T P + PP Q P ++Q P Sbjct: 308 KSTFNPSSITSPPP--QSSPQSSQLQQQP 334 Score = 39.7 bits (91), Expect = 0.14 Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 3/165 (1%) Frame = +3 Query: 333 IPASQRLYYDQLFKIADADGDG-VIGLNDSAFFKKSGLPNAVLGEVFLILSFLFRYIS*Y 509 I ++ Y LF D DGDG ++G F SGLP +L + Sbjct: 111 ISNGEKQNYIDLFNKYDEDGDGFILGSQAKTIFGTSGLPTKMLSHI-------------- 156
W LSD K LD + F +A LI +G L + H + Sbjct: 157 ----WNLSDVSKDQKLDCQEFIMATFLIRSVLKGYELPNKLPESLITSSHYISS------ 206
VP PK+ + +PP ++ + + K G S+ K LF Sbjct: 207 --AGVPSPKIPEWLIPPPERIIYEDLFNKNQQGGIFTGSQAKVLF 249 -------------------- gnl|ti|818413381 name:POAA-aab71c04.g1 mate_pair:820217256 (914 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_114013.1| fibrillin 1 [Rattus norvegicus] >gi|495965... 64 1e-008 gb|AAC62317.1| mutant fibrillin-1 [Mus musculus] 64 1e-008 sp|Q61554|FBN1_MOUSE Fibrillin-1 precursor >gi|575510|gb|AA... 64 1e-008 ref|NP_032019.1| fibrillin 1 [Mus musculus] >gi|726324|gb|A... 64 1e-008 ref|XP_861792.1| PREDICTED: similar to Fibrillin-1 precurso... 63 1e-008 ref|XP_861765.1| PREDICTED: similar to Fibrillin-1 precurso... 63 1e-008 ref|XP_861733.1| PREDICTED: similar to Fibrillin-1 precurso... 63 1e-008 ref|XP_861706.1| PREDICTED: similar to Fibrillin-1 precurso... 63 1e-008 ref|XP_535468.2| PREDICTED: similar to Fibrillin-1 precurso... 63 1e-008 ref|NP_001001771.1| fibrillin 1 [Sus scrofa] >gi|5739075|gb... 63 1e-008 >ref|NP_114013.1| fibrillin 1 [Rattus norvegicus] gb|AAD34438.1| fibrillin-1 [Rattus norvegicus] Length = 2872
Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +2
I D DECSN T+ CSQ+A C NT+GSY C CK+ ++GDGFTC Sbjct: 1360 IKCTDLDECSNGTHM-CSQHADCKNTMGSYRCLCKDGYTGDGFTC 1403 Score = 45.1 bits (105), Expect = 0.004 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +2 Query: 374 DFDECSNATYNNCSQNAICNNTIGSYTCACKNSFSGDGFTC 496 D +EC +N C ++A+C NT GS+ C+C + GDG C Sbjct: 1323 DINECEIGAHN-CGRHAVCTNTAGSFKCSCSPGWIGDGIKC 1362 Score = 41.2 bits (95), Expect = 0.051 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = +2 Query: 356 RLILAVDFDECSNATYNNCSQNAICNNTIGSYTCACKNSF 475 +L++ D DEC N C +NA C NT GSY C CK + Sbjct: 1803 KLLVCEDIDECQNGPV--CQRNAECINTAGSYRCDCKPGY 1840 Score = 40.0 bits (92), Expect = 0.11 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +2 Query: 371 VDFDECSNATYNNCSQNAICNNTIGSYTCACKNSFSGD--GFTCQ 499 +D +EC++ N C +C NT GS+TC C+ FS D G +C+ Sbjct: 2524 IDNNECTSEI-NLCGSKGVCQNTPGSFTCECQRGFSLDQSGASCE 2567 Score = 39.7 bits (91), Expect = 0.15 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +2 Query: 371 VDFDECSNATYNNCSQNAICNNTIGSYTCACKNSF--SGDGFTC 496 +D DEC+ N C +N C NT+GS+ C C + + DG TC Sbjct: 1930 IDVDECATGNGNLC-RNGQCVNTVGSFQCRCNEGYEVAPDGRTC 1972 Score = 35.8 bits (81), Expect = 2.1 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +2 Query: 371 VDFDECSNATYNNCSQNAICNNTIGSYTCACKNSFSGDGFTCQGTK 508 +D +EC T +N C NT+GSYTC C DGFT T+ Sbjct: 2291 IDENECQ--TKPGICENGRCLNTLGSYTCEC-----NDGFTASPTQ 2329 Score = 34.7 bits (78), Expect = 4.8 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = +2 Query: 371 VDFDECSNATYNNCSQNAICNNTIGSYTCACKNSF--SGDGFTCQ 499 VD +EC+ A C N IC NT GSY C+C + DG +C+ Sbjct: 2444 VDLNECNQAP-KPC--NFICKNTEGSYQCSCPKGYILQEDGRSCK 2485 Score = 34.3 bits (77), Expect = 6.2 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 329 CYSIFEKLSRLILAVDFDECSNATYNNCSQNAICNNTIGSYTCACKNSF 475 C++ F+ + +D +EC + N C NTIGS+ C C + F Sbjct: 1877 CHTGFKTNIDQTMCLDINECER----DACGNGTCRNTIGSFNCRCNHGF 1921 ---------------- nl|ti|818413393 name:POAA-aab71d04.g1 (643 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 66 1e-009 --------- gnl|ti|820217298 name:POAA-aab71f12.b1 mate_pair:818413422 (903 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAW44910.1| cytoplasm protein, putative [Cryptococcus ne... 107 4e-022 gb|AAO72071.1| putative membrane protein [Nectria haematoco... 105 3e-021 gb|AAN86012.1| unknown [Nectria haematococca] 105 3e-021 emb|CAG90009.1| unnamed protein product [Debaryomyces hanse... 104 5e-021 sp|Q03034|YD39_YEAST Hypothetical 56.2 kDa protein in PAD1-... 100 9e-020 gb|EAA72586.1| hypothetical protein FG04669.1 [Gibberella z... 93 1e-017 gb|EAA78219.1| hypothetical protein FG06434.1 [Gibberella z... 87 8e-016 gb|AAG03643.1| conserved hypothetical protein [Pseudomonas ... 87 1e-015 ref|ZP_00140684.2| COG0043: 3-polyprenyl-4-hydroxybenzoate ... 86 1e-015 ref|XP_718068.1| carboxy-lyase UbiD-like protein [Candida a... 84 5e-015 >gb|AAW44910.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] ref|XP_572217.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 404
Identities = 57/140 (40%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Frame = -1
D G+DCPWAL FG PP A M P+PD +E Y+G +F+ Sbjct: 156 DEGKDCPWALCFGVPPAAIMTSSMPIPDGVSEGSYIG---------------TFI----- 195
G + V+KCETND+LVPA SEIVFEG +S+ E A EGPFGEMH Sbjct: 196 -----------------GESIPVVKCETNDLLVPATSEIVFEGFLSVTETAPEGPFGEMH 238
G +++G + P++ V C T Sbjct: 239 GYVFQGNSRDSPVYKVNCIT 258 Score = 39.3 bits (90), Expect = 0.19 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -2 Query: 158 VDAITYRNGAIMPISVSGQAVDETHTIIGITCAAAIHYTLKQAGI 24 V+ IT+R+ AI+P+S G+ DET T+IG A I + AG+ Sbjct: 254 VNCITHRDDAILPMSACGRLTDETQTLIGSLHAVEIGEICRDAGL 298 ------------------- nl|ti|818413422 name:POAA-aab71f12.g1 mate_pair:820217298 (893 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA78219.1| hypothetical protein FG06434.1 [Gibberella z... 50 8e-005 ref|XP_718068.1| carboxy-lyase UbiD-like protein [Candida a... 49 2e-004 gb|EAA72586.1| hypothetical protein FG04669.1 [Gibberella z... 48 5e-004 gb|AAG03643.1| conserved hypothetical protein [Pseudomonas ... 46 0.002 ref|ZP_00140684.2| COG0043: 3-polyprenyl-4-hydroxybenzoate ... 46 0.002 gb|AAO72071.1| putative membrane protein [Nectria haematoco... 38 0.54 gb|AAN86012.1| unknown [Nectria haematococca] 38 0.54 emb|CAG90009.1| unnamed protein product [Debaryomyces hanse... 37 0.92 emb|CAI76614.1| cullin, putative [Theileria annulata] 37 1.2 gb|EAN31946.1| cullin protein, putative [Theileria parva] >... 37 1.2 >gb|EAA78219.1| hypothetical protein FG06434.1 [Gibberella zeae PH-1] ref|XP_386610.1| hypothetical protein FG06434.1 [Gibberella zeae PH-1] Length = 490
Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +3
N N L+FR FV+ L+KDGDL +ID+ VD +LEVGA R+V T Sbjct: 30 NSNQGDPQLDFRSFVEVLRKDGDLADIDQEVDPNLEVGAVVRRVSET 76 --------------- gnl|ti|818413442 name:POAA-aab71h09.g1 mate_pair:820217316 (900 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 173 6e-042 -------------- gnl|ti|820217318 name:POAA-aab71h11.b1 mate_pair:818413444 (922 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_644901.1| hypothetical protein DDB0217068 [Dictyoste... 53 2e-005 ref|XP_332104.1| predicted protein [Neurospora crassa] >gi|... 50 9e-005 ref|ZP_00415321.1| hypothetical protein AvinDRAFT_5847 [Azo... 46 0.002 ref|ZP_00379060.1| hypothetical protein BlinB01002514 [Brev... 42 0.023 ref|ZP_00567016.1| 2OG-Fe(II) oxygenase superfamily [Franki... 42 0.040 gb|AAC31662.1| Unknown gene product [Homo sapiens] 40 0.15 ref|XP_644239.1| hypothetical protein DDB0167593 [Dictyoste... 39 0.26 gb|EAN77818.1| hypothetical protein Tb10.70.3310 [Trypanoso... 36 1.7 gb|EAA76245.1| hypothetical protein FG09449.1 [Gibberella z... 36 2.2 ref|XP_531020.1| PREDICTED: hypothetical protein XP_531020 ... 35 2.8 >ref|XP_644901.1| hypothetical protein DDB0217068 [Dictyostelium discoideum] gb|AAO52136.1| similar to Dictyostelium. Serine/threonine protein kinase [Dictyostelium discoideum] gb|EAL71127.1| hypothetical protein DDB0217068 [Dictyostelium discoideum] Length = 471 Score = 52.8 bits (125), Expect = 2e-005 Identities = 24/42 (57%), Positives = 28/42 (66%) Frame = +1
K YKLLIY KGSFF +H DT + D+ FG+LVV P H G Sbjct: 109 KANLYKLLIYNKGSFFLSHKDTEKEDKMFGTLVVNLPSSHLG 150 ------------- gnl|ti|818414901 name:POAA-aab72a06.b1 mate_pair:818416238 (920 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_636893.1| hypothetical protein DDB0219308 [Dictyoste... 71 5e-011 ref|XP_687034.1| PREDICTED: similar to Smcr8 protein [Danio... 65 4e-009 emb|CAF95296.1| unnamed protein product [Tetraodon nigrovir... 64 1e-008 emb|CAF88089.1| unnamed protein product [Tetraodon nigrovir... 64 1e-008 gb|AAS92636.1| Smith-Magenis syndrome chromosome region, ca... 63 1e-008 gb|AAH85095.1| Smcr8 protein [Mus musculus] 62 3e-008 ref|XP_851653.1| PREDICTED: similar to Smith-Magenis syndro... 62 3e-008 gb|AAI01117.1| Unknown (protein for IMAGE:40012084) [Homo s... 62 3e-008 dbj|BAE26183.1| unnamed protein product [Mus musculus] 62 3e-008 dbj|BAC35133.1| unnamed protein product [Mus musculus] 62 3e-008 >ref|XP_636893.1| hypothetical protein DDB0219308 [Dictyostelium discoideum] gb|EAL63405.1| hypothetical protein DDB0219308 [Dictyostelium discoideum] Length = 1435 Score = 71.2 bits (173), Expect = 5e-011 Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 2/67 (2%) Frame = -2
DFI++SEFSEQ GP+ ++++P G FDL+ +V+K+M+VDFQNK+ND ++Y KDSQ Sbjct: 299 DFIVLSEFSEQAGPIALNLVPTEFHFGMLDFDLSKYVVKVMSVDFQNKTNDLKTYTKDSQ 358
+ P+
Sbjct: 359 MFFTLPS 365 --------------------- gnl|ti|818416248 name:POAA-aab72b04.g1 mate_pair:818414910 (893 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_919409.1| DEAH (Asp-Glu-Ala-His) box polypeptide 34 ... 51 6e-005 ref|NP_055496.2| DEAH (Asp-Glu-Ala-His) box polypeptide 34 ... 51 6e-005 ref|XP_797170.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-Hi... 50 1e-004 dbj|BAB23515.1| unnamed protein product [Mus musculus] 49 2e-004 ref|NP_082159.2| DEAH (Asp-Glu-Ala-His) box polypeptide 34 ... 49 2e-004 dbj|BAC97872.1| mKIAA0134 protein [Mus musculus] 49 2e-004 sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent helicase DHX34... 49 2e-004 ref|XP_397034.2| PREDICTED: similar to ENSANGP00000016870 [... 46 0.002 sp|Q14147|DHX34_HUMAN Probable ATP-dependent helicase DHX34... 41 0.064 dbj|BAA09483.2| KIAA0134 [Homo sapiens] 41 0.064 >ref|NP_919409.1| DEAH (Asp-Glu-Ala-His) box polypeptide 34 isoform 2 [Homo sapiens] Length = 883
Identities = 35/109 (32%), Positives = 41/109 (37%) Frame = -1
+VEPVLTIAA LSVQSPF R Sbjct: 601 LVEPVLTIAAALSVQSPFTR---------------------------------------- 620
R L SD GDPF L N+F AW+QVK++ RK+ Sbjct: 621 ---SAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKW 666 Score = 40.8 bits (94), Expect = 0.064 Identities = 29/92 (31%), Positives = 39/92 (42%) Frame = -3 Query: 783 FPFIEKPAPEVLDHAIARLQQYQVCFSISLSCPSFLFLPFCLNF*IFFLYPFLFSL*ALV 604 FPFIE P P L+ AI L+ S Sbjct: 543 FPFIEPPPPASLETAILYLRDQGALDS--------------------------------- 569
E LTP+G++L+ LPVD+ IGK+L L S+F + Sbjct: 570 SEALTPIGSLLAQLPVDVVIGKMLILGSMFSL 601 --------------- gnl|ti|818414911 name:POAA-aab72b05.b1 mate_pair:818416249 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 491 e-137 -------------- gnl|ti|818416249 name:POAA-aab72b05.g1 mate_pair:818414911 (898 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 259 7e-068 ------------- gnl|ti|818414912 name:POAA-aab72b07.b1 mate_pair:818416251 (537 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_761991.1| hypothetical protein UM05844.1 [Ustilago m... 54 3e-006 ref|XP_502693.1| hypothetical protein [Yarrowia lipolytica]... 52 1e-005 ref|XP_663598.1| hypothetical protein AN5994.2 [Aspergillus... 50 5e-005 emb|CAA22272.1| SPCC61.03 [Schizosaccharomyces pombe] >gi|1... 48 2e-004 ref|XP_635541.1| hypothetical protein DDB0189092 [Dictyoste... 48 2e-004 gb|EAL93307.1| YjeF domain protein [Aspergillus fumigatus A... 47 3e-004 ref|XP_331712.1| hypothetical protein [Neurospora crassa] >... 45 0.002 ref|XP_623401.1| PREDICTED: similar to ENSANGP00000015295 [... 44 0.002 ref|XP_623353.1| PREDICTED: similar to ENSANGP00000015295 [... 44 0.002 gb|AAX27511.2| SJCHGC02230 protein [Schistosoma japonicum] 44 0.004 >ref|XP_761991.1| hypothetical protein UM05844.1 [Ustilago maydis 521] gb|EAK86789.1| hypothetical protein UM05844.1 [Ustilago maydis 521] Length = 350 Score = 53.5 bits (127), Expect = 3e-006 Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%) Frame = +2
DGL ++ PD+IKGYK AILTPNV EF RLC + D K E D ++LA+ Sbjct: 169 DGLWLLQNEPDLIKGYKKAILTPNVAEFGRLCDTLGIDCKQEPDSAAKKLAQ 220 --------------- gnl|ti|818416256 name:POAA-aab72b12.g1 mate_pair:818414917 (871 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00110033.1| COG2133: Glucose/sorbosone dehydrogenase... 63 1e-008 ref|ZP_00510317.1| hypothetical protein CtheDRAFT_0722 [Clo... 51 5e-005 ref|ZP_00314749.1| COG3210: Large exoproteins involved in h... 44 0.007 emb|CAB61926.1| putative hydrolase (putative secreted prote... 39 0.18 ref|YP_245255.1| glucan 1,4-beta-glucosidase [Xanthomonas c... 39 0.31 ref|ZP_00317746.1| hypothetical protein Mdeg02000213 [Micro... 38 0.52 gb|AAO76885.1| beta-glucosidase (gentiobiase) [Bacteroides ... 36 2.0 ref|YP_097613.1| beta-glucosidase [Bacteroides fragilis YCH... 35 2.6 ref|NP_822148.1| putative hydrolase [Streptomyces avermitil... 35 4.4 gb|AAO78406.1| beta-glucosidase [Bacteroides thetaiotaomicr... 35 4.4 >ref|ZP_00110033.1| COG2133: Glucose/sorbosone dehydrogenases [Nostoc punctiforme PCC 73102] Length = 1162 Score = 63.2 bits (152), Expect = 1e-008 Identities = 30/51 (58%), Positives = 37/51 (72%) Frame = +3
++++ATE G+I L AGQKYDI LEY+E T AV KLAW S QTKE+ Q Sbjct: 274 VNQSATESVGSIALVAGQKYDIKLEYFENTVTAVSKLAWSSATQTKEIIPQ 324 Score = 63.2 bits (152), Expect = 1e-008 Identities = 30/51 (58%), Positives = 37/51 (72%) Yüklə 3,49 Mb. Dostları ilə paylaş:
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