Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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Sbjct: 51 KLRGLAAPSNLSMNQTLEGHSG 72 ---------------- gnl|ti|820221031 name:POAA-aaa48p19.b1 mate_pair:820218555 (792 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_647464.1| hypothetical protein DDB0189693 [Dictyoste... 285 2e-075 ref|XP_796805.1| PREDICTED: similar to Coatomer alpha subun... 232 2e-059 gb|AAF47535.1| CG7961-PB, isoform B [Drosophila melanogaste... 230 5e-059 emb|CAA09492.1| coatomer alpha subunit [Drosophila melanoga... 230 9e-059 dbj|BAD93881.1| hypothetical protein [Arabidopsis thaliana] 226 1e-057 gb|AAN46802.1| At1g62020/F8K4_21 [Arabidopsis thaliana] >gi... 226 1e-057 ref|NP_176393.1| protein transporter/ transporter [Arabidop... 226 1e-057 gb|EAL30267.1| GA20724-PA [Drosophila pseudoobscura] 225 2e-057 gb|AAH82785.1| Copa protein [Mus musculus] 224 4e-057 ref|NP_034068.2| coatomer protein complex subunit alpha [Mu... 224 4e-057 >ref|XP_647464.1| hypothetical protein DDB0189693 [Dictyostelium discoideum] gb|EAL73444.1| hypothetical protein DDB0189693 [Dictyostelium discoideum] Length = 1221 Score = 285 bits (668), Expect = 2e-075 Identities = 127/234 (54%), Positives = 168/234 (71%), Gaps = 3/234 (1%) Frame = -2
M + P + L L+ERLK AY +TTEGKF+DA SHF +I+H ++ VD K E Sbjct: 981 MPIQRKSAAPYITYGLGHLIERLKTNAYKSTTEGKFNDALSHFTYILHTIIFCSVDNKQE 1040
+E K+L+ +CREY+ GI++ELQRKELS K + RQAELAAYFTHCNL P HLILS Sbjct: 1041 VNELKDLINICREYILGIKIELQRKELSIGAQKDSTLGRQAELAAYFTHCNLDPSHLILS 1100
LRSAMN AYK+K++N AASFA+RL+ LNP + D+ T A+KV FA+Q P + +NYD Sbjct: 1101 LRSAMNCAYKVKHFNLAASFARRLISLNP-NPDLATQAKKVFNFAQQTPTPSDIQQLNYD 1159
ERNPFV+C+HS+ PIY+GSP+ CPYC S + P G++C +CQI++IG++ G Sbjct: 1160 ERNPFVICAHSYVPIYKGSPLIKCPYCSSCYLPTHKGKVCSVCQISEIGKDVQG 1213 -------------------- gnl|ti|820218555 name:POAA-aaa48p19.g1 mate_pair:820221031 (601 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAH82785.1| Copa protein [Mus musculus] 252 1e-065 ref|NP_001026576.1| coatomer protein complex, subunit alpha... 252 1e-065 emb|CAI12454.1| coatomer protein complex, subunit alpha [Ho... 252 1e-065 emb|CAI12455.1| coatomer protein complex, subunit alpha [Ho... 252 1e-065 dbj|BAE02266.1| unnamed protein product [Macaca fascicularis] 252 1e-065 ref|NP_034068.2| coatomer protein complex subunit alpha [Mu... 252 1e-065 ref|XP_882838.1| PREDICTED: similar to Coatomer alpha subun... 252 1e-065 ref|XP_871186.1| PREDICTED: similar to Coatomer alpha subun... 252 1e-065 ref|XP_882751.1| PREDICTED: similar to Coatomer alpha subun... 252 1e-065 ref|XP_222899.3| PREDICTED: similar to Coatomer protein com... 252 1e-065 >gb|AAH82785.1| Copa protein [Mus musculus] Length = 1131
Identities = 109/148 (73%), Positives = 127/148 (85%) Frame = +1
EDLVVSASLD TVRVWDISGLRK+++S ++FG TD VVK++LEGHDR Sbjct: 54 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 113
GVNWAAFHPT PLIVSGADDRQVK+WRM+++KAWEV+T RGH+NNVSC +FHPR ELILS Sbjct: 114 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILS 173
NSEDK+IRVWDM+KRTG+QTFRR+HDRF Sbjct: 174 NSEDKSIRVWDMSKRTGVQTFRRDHDRF 201 Score = 59.0 bits (131), Expect = 2e-007 Identities = 27/69 (39%), Positives = 41/69 (59%) Frame = +1 Query: 331 AAFHPTSPLIVSGADDRQVKLWRMSDTKAWEVETFRGHFNNVSCVLFHPRPELILSNSED 510 A FH P I+S +DD+ +++W V T GH + V C FHP +L++S S D Sbjct: 6 AFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT--GHNHYVMCAQFHPSEDLVVSASLD 63
+T+RVWD++ Sbjct: 64 QTVRVWDIS 72 ---------------------------------------- PP14_Resultat
mate_pair:818416806 (597 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_639245.1| cleft lip and palate transmembrane 1 prote... 130 3e-029 gb|AAW27623.1| SJCHGC02352 protein [Schistosoma japonicum] 119 9e-026 emb|CAF99394.1| unnamed protein product [Tetraodon nigrovir... 118 1e-025 ref|XP_655542.1| cleft lip and palate transmembrane protein... 117 2e-025 ref|XP_648183.1| cleft lip and palate transmembrane protein... 117 2e-025 ref|XP_524299.1| PREDICTED: hypothetical protein XP_524299 ... 117 2e-025 ref|XP_852578.1| PREDICTED: similar to cleft lip and palate... 117 2e-025 ref|XP_865923.1| PREDICTED: similar to cleft lip and palate... 117 2e-025 ref|XP_541570.2| PREDICTED: similar to cleft lip and palate... 117 2e-025 dbj|BAE28332.1| unnamed protein product [Mus musculus] 117 2e-025 >ref|XP_639245.1| cleft lip and palate transmembrane 1 protein [Dictyostelium discoideum] gb|EAL65887.1| cleft lip and palate transmembrane 1 protein [Dictyostelium discoideum] Length = 619
Identities = 58/66 (87%), Positives = 65/66 (98%) Frame = +3
EF++MTPQLFINYKLKSV+HLPW+VFMY+ALNTFIDDLFAFIIKMP LHRLSCLRDDI+F Sbjct: 486 EFIMMTPQLFINYKLKSVSHLPWRVFMYRALNTFIDDLFAFIIKMPLLHRLSCLRDDIIF 545
I+YLYQ
Sbjct: 546 IVYLYQ 551 Score = 48.9 bits (115), Expect = 1e-004 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +3 Query: 30 AIYSLMYQTHKGWYSWIIGSLVGTVYTFGIV 122 +IYSL Y HK WYSW++ SLV TVYTF + Sbjct: 458 SIYSLYYHEHKSWYSWVVSSLVRTVYTFEFI 488 ------------------ gnl|ti|818416825 name:POAA-aaa49n22.g1 mate_pair:820221158 (325 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAM43779.2| similar to Macaca fascicularis (Crab eating ... 49 5e-005 ref|XP_642609.1| putative protein tyrosine kinase [Dictyost... 49 5e-005 ref|XP_521839.1| PREDICTED: wee1 tyrosine kinase [Pan trogl... 40 0.019 ref|XP_593176.2| PREDICTED: similar to Wee1-like protein ki... 40 0.019 ref|XP_881935.1| PREDICTED: similar to Wee1-like protein ki... 40 0.019 ref|XP_881881.1| PREDICTED: similar to Wee1-like protein ki... 40 0.019 gb|AAF52453.2| CG4488-PA [Drosophila melanogaster] >gi|2143... 40 0.019 gb|AAC46913.2| Wee1 kinase [Drosophila melanogaster] 40 0.019 pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase... 40 0.019 ref|XP_624069.1| PREDICTED: similar to Wee1-like CDK Tyrosi... 38 0.097 >gb|AAM43779.2| similar to Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey). Hypothetical 49.3 kDa protein [Dictyostelium discoideum] Length = 998 Score = 48.9 bits (115), Expect = 5e-005 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 10/90 (11%) Frame = +3
MS L+KSDIF+LG TLYEL R KPLP++G EW Sbjct: 763 MSALKKSDIFSLGCTLYEL--------------------------ARCKPLPKSGMEWDS 796
IR+G+L ++FS EF +L+ Sbjct: 797 IRNGILSFEKEDSIYDDNKNDFSTEFWQLI 826 ------------- gnl|ti|820218993 name:POAA-aaa50i05.b1 mate_pair:818417809 (480 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAD02339.1| delta 9-fatty acid desaturase [Lentinula ed... 70 2e-011 ref|XP_363864.1| hypothetical protein MG01790.4 [Magnaporth... 69 7e-011 emb|CAA71449.1| delta-9 fatty acid desaturase [Cryptococcus... 68 1e-010 emb|CAA71448.1| delta-9 fatty acid desaturase [Cryptococcus... 68 1e-010 gb|AAT93029.1| YGL055W [Saccharomyces cerevisiae] 67 2e-010 ref|XP_447271.1| unnamed protein product [Candida glabrata]... 67 2e-010 ref|XP_757102.1| hypothetical protein UM00955.1 [Ustilago m... 67 2e-010 gb|AAA34826.1| delta-9 fatty acid desaturase 67 2e-010 emb|CAA96757.1| OLE1 [Saccharomyces cerevisiae] >gi|1703084... 67 2e-010 ref|XP_661739.1| hypothetical protein AN4135.2 [Aspergillus... 67 3e-010 >dbj|BAD02339.1| delta 9-fatty acid desaturase [Lentinula edodes] Length = 471
Identities = 26/38 (68%), Positives = 31/38 (81%) Frame = +2
+MI A +T GEGYHNFHH+FP DYRN +KWYQ+D KW Sbjct: 263 HMITAFVTIGEGYHNFHHQFPMDYRNAIKWYQYDPTKW 300 Score = 59.3 bits (142), Expect = 4e-008 Identities = 29/57 (50%), Positives = 35/57 (61%) Frame = +3 Query: 174 NMIVAILTCGEGYHNFHHECPFDYQNTTKFNQFDNAKWVIGSNLTPLLLPSPLSPLP 344 +MI A +T GEGYHNFHH+ P DY+N K+ Q+D KW I L L L S L P Sbjct: 263 HMITAFVTIGEGYHNFHHQFPMDYRNAIKWYQYDPTKWTIWV-LAKLGLASHLKVFP 318 ---------------------------- gnl|ti|818417809 name:POAA-aaa50i05.g1 mate_pair:820218993 (479 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|YP_264647.1| probable fatty acid desaturase [Psychrobac... 83 4e-015 emb|CAC81988.1| putative stearoyl-CoA desaturase [Mortierel... 83 4e-015 ref|XP_644715.1| hypothetical protein DDB0168056 [Dictyoste... 83 4e-015 ref|ZP_00653501.1| Stearoyl-CoA 9-desaturase [Psychrobacter... 83 4e-015 emb|CAB38178.1| stearoyl-CoA desaturase [Mortierella alpina] 76 3e-013 ref|YP_045373.1| putative fatty acid desaturase [Acinetobac... 76 3e-013 emb|CAB38177.1| stearoyl-CoA desaturase [Mortierella alpina] 75 6e-013 gb|AAD55241.2| delta nine desaturase; Des9MA [Mortierella a... 75 6e-013 dbj|BAA75928.1| delta-9 fatty acid desaturase [Mortierella ... 75 6e-013 ref|ZP_00777048.1| Stearoyl-CoA 9-desaturase [Pseudoalterom... 75 6e-013 >ref|YP_264647.1| probable fatty acid desaturase [Psychrobacter arcticus 273-4] gb|AAZ19213.1| probable fatty acid desaturase [Psychrobacter arcticus 273-4] Length = 467 Score = 82.8 bits (203), Expect = 4e-015 Identities = 36/64 (56%), Positives = 43/64 (67%) Frame = +3
W YHN+HH F YDYRN +K++QYDPTKWLIAGLS +G T +L IK E QM+ Sbjct: 307 WGEGYHNYHHFFQYDYRNGVKWWQYDPTKWLIAGLSKLGLTSELRTVDDTTIKHAEVQMQ 366
K A
Sbjct: 367 FKAA 370 ---------------------- gnl|ti|818417212 name:POAA-aaa51e08.g1 mate_pair:818416930 (634 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAL90240.1| Patatin-like serine hydrolase, putative [Asp... 73 6e-012 ref|XP_807937.1| hypothetical protein [Trypanosoma cruzi] >... 70 4e-011 ref|XP_505230.1| hypothetical protein [Yarrowia lipolytica]... 70 5e-011 ref|XP_805126.1| hypothetical protein [Trypanosoma cruzi] >... 70 7e-011 emb|CAD60564.1| unnamed protein product [Podospora anserina] 67 3e-010 ref|XP_332099.1| hypothetical protein [Neurospora crassa] >... 67 4e-010 gb|AAT77905.1| putative patatin-like phospholipase [Oryza s... 61 2e-008 ref|NP_196024.1| unknown protein [Arabidopsis thaliana] >gi... 57 5e-007 ref|XP_463448.1| P0512C01.22 [Oryza sativa (japonica cultiv... 54 5e-006 ref|NP_191273.1| unknown protein [Arabidopsis thaliana] >gi... 53 9e-006 >gb|EAL90240.1| Patatin-like serine hydrolase, putative [Aspergillus fumigatus Af293] ref|XP_752278.1| patatin-like serine hydrolase [Aspergillus fumigatus Af293] Length = 589 Score = 73.2 bits (178), Expect = 6e-012 Identities = 34/58 (58%), Positives = 43/58 (74%) Frame = +2
G +D L+EC+R N+GD+TF EAY SKRILNIT+A++ P LLNYLTAPNV+ Sbjct: 282 GYFLDAGVLEECVRANLGDLTFEEAYARSKRILNITIATSGKNGTPNLLNYLTAPNVL 339 Score = 35.0 bits (79), Expect = 1.9 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = +1 Query: 505 LIWSAACASCALK-FLYEPVELMAKDKNGQIIPY 603 LIWSAA AS A LY+PV + KD+ G I+P+ Sbjct: 339 LIWSAAVASNASTGSLYQPVTVYCKDETGSIVPW 372 ------------------------- gnl|ti|818417251 name:POAA-aaa51m20.g1 mate_pair:818416963 (640 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_642085.1| fimbrin [Dictyostelium discoideum] >gi|604... 66 1e-009 sp|P54680|FIMB_DICDI Fimbrin >gi|992560|gb|AAA75489.1| fimbrin 66 1e-009 ref|XP_760915.1| hypothetical protein UM04768.1 [Ustilago m... 58 3e-007 ref|XP_795998.1| PREDICTED: similar to CG8649-PA, isoform A... 53 9e-006 ref|XP_445058.1| unnamed protein product [Candida glabrata]... 52 1e-005 emb|CAA88210.1| Sac6p [Saccharomyces cerevisiae] >gi|4420|e... 52 1e-005 ref|XP_455968.1| unnamed protein product [Kluyveromyces lac... 52 2e-005 gb|AAW45828.1| hypothetical protein CNJ01680 [Cryptococcus ... 52 2e-005 ref|XP_392230.1| PREDICTED: similar to ENSANGP00000011155 [... 50 7e-005 gb|EAA05335.2| ENSANGP00000011155 [Anopheles gambiae str. P... 49 1e-004 >ref|XP_642085.1| fimbrin [Dictyostelium discoideum] gb|EAL68100.1| fimbrin [Dictyostelium discoideum] Length = 610 Score = 65.9 bits (159), Expect = 1e-009 Identities = 34/66 (51%), Positives = 40/66 (60%) Frame = +3
L+W I KI GLF+R+NLT+ PELYRLL GE I DLLKL ++LLR Sbjct: 223 LTWQIIKI--------------GLFARINLTNHPELYRLLHDGETIEDLLKLPVEEILLR 268
W NY L
Sbjct: 269 WFNYHL 274 ------------- gnl|ti|818416972 name:POAA-aaa51o20.b1 mate_pair:818417259 (784 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_644909.1| hypothetical protein DDB0168929 [Dictyoste... 65 2e-009 ref|XP_711756.1| hypothetical protein CaO19.10308 [Candida ... 55 3e-006 emb|CAE65858.1| Hypothetical protein CBG10996 [Caenorhabdit... 49 2e-004 ref|XP_645355.1| hypothetical protein DDB0168592 [Dictyoste... 47 0.001 emb|CAE66535.1| Hypothetical protein CBG11839 [Caenorhabdit... 47 0.001 ref|XP_635459.1| hypothetical protein DDB0219636 [Dictyoste... 46 0.001 emb|CAE60713.1| Hypothetical protein CBG04381 [Caenorhabdit... 46 0.001 emb|CAE65253.1| Hypothetical protein CBG10141 [Caenorhabdit... 46 0.002 emb|CAG06679.1| unnamed protein product [Tetraodon nigrovir... 45 0.003 emb|CAE57254.1| Hypothetical protein CBG00134 [Caenorhabdit... 44 0.006 >ref|XP_644909.1| hypothetical protein DDB0168929 [Dictyostelium discoideum] gb|AAO52144.1| similar to phosphatidylethanolamine methyltransferase. [Schizosaccharomyces pombe] [Dictyostelium discoideum] gb|EAL70976.1| hypothetical protein DDB0168929 [Dictyostelium discoideum] Length = 736 Score = 65.5 bits (158), Expect = 2e-009 Identities = 29/43 (67%), Positives = 33/43 (76%) Frame = -2
F LP T+NPL+LHPI EW+ FDY KN S S+LLL F LPGWV Sbjct: 129 FPLPYTKNPLTLHPISEWSFFDYAKNASLASLLLLLFNLPGWV 171 Score = 45.4 bits (106), Expect = 0.002 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Frame = -3 Query: 167 FVATFLFWRLAYNVFLGFILHHQSKSQFLTGIFK-YITRENPLYGIIKESTT 15 F+A F+FWR YN+ LG +L +QS + F+T K + +PLY +K+ T Sbjct: 172 FIAWFIFWRFMYNIGLGLLLRYQSNTTFITKFVKTWSNPSHPLYPHLKQFCT 223 ---------------- gnl|ti|818417852 name:POAA-aaa52d17.g1 mate_pair:820219037 (829 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAZ72726.1| NADH dehydrogenase subunit 4L [Physarum poly... 57 1e-006 ref|ZP_00373261.1| ATP synthase F0, A subunit [Wolbachia en... 46 0.002 ref|NP_966216.1| ATP synthase F0, A subunit [Wolbachia endo... 45 0.002 ref|YP_198290.1| F0F1-type ATP synthase, subunit a [Wolbach... 42 0.033 gb|AAP94715.1| ATP synthase F0 subunit 6 [Emiliania huxleyi... 38 0.48 gb|AAZ72723.1| ATP synthase subunit 8 [Physarum polycephalum] 36 1.4 ref|NP_818781.1| I-Cg1III protein [Candida glabrata] >gi|29... 35 2.4 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 3.1 ref|ZP_00545249.1| H+-transporting two-sector ATPase, A sub... 35 4.0 gb|AAL36725.1| ATP synthase F0 subunit 6 [Mesostigma viride] 34 5.3 >gb|AAZ72726.1| NADH dehydrogenase subunit 4L [Physarum polycephalum] Length = 95
Identities = 40/74 (54%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Frame = +2
F IIFALMIITL + F F + LLGVNI V DDFLGKYIV F + Sbjct: 9 FMFIIFALMIITLKPNLLFVLFALEIILLGVNINFIMASLVLDDFLGKYIVLILFSVAAL 68
GLILLLNYYG Sbjct: 69 DTSIGLILLLNYYG 82 Score = 37.4 bits (85), Expect = 0.62 Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = +1 Query: 262 LKPNLLFVFLH*KLFIR-C*YNFIMA-L*C**FFR*IYSMILFSVLLL-IQVWFNFTIKL 432 LKPNLLFV ++ + NFIMA L F +ILFSV L + + Sbjct: 21 LKPNLLFVLFALEIILLGVNINFIMASLVLDDFLGKYIVLILFSVAALDTSIGLILLLNY 80
+HNITRITANIK Sbjct: 81 YGLHNITRITANIK 94 ---------------- gnl|ti|818417855 name:POAA-aaa52f03.g1 mate_pair:820219041 (787 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB47544.1| MigA [Dictyostelium discoideum] 77 6e-013 ref|XP_639138.1| hypothetical protein DDB0191409 [Dictyoste... 77 6e-013 ref|XP_635359.1| hypothetical protein DDB0189261 [Dictyoste... 75 2e-012 gb|EAL41378.1| ENSANGP00000025754 [Anopheles gambiae str. P... 44 0.005 gb|EAA05937.3| ENSANGP00000005472 [Anopheles gambiae str. P... 44 0.005 ref|XP_797344.1| PREDICTED: similar to HECT domain containi... 42 0.023 ref|XP_781296.1| PREDICTED: similar to HECT domain containi... 42 0.023 gb|AAQ23602.1| LP05936p [Drosophila melanogaster] 37 0.57 dbj|BAD32384.1| mKIAA1131 protein [Mus musculus] 37 0.57 gb|AAF52899.1| CG5604-PA [Drosophila melanogaster] >gi|2458... 37 0.57 >gb|AAB47544.1| MigA [Dictyostelium discoideum] Length = 813
Identities = 42/114 (36%), Positives = 56/114 (49%) Frame = +1
R +PRPPQS F EY+ DFD GI++ I+ Sbjct: 627 RYQPRPPQSILF--------------------------------EYSFDFDFKGIIFWIS 654
T GG W NP S +I I +SS ++G DIVE+ P W++DVP+SW+ IDL Sbjct: 655 TDGGNEKWSNPHSTSKIKITSSSIDKGNLYDIVELTPNAFWTKDVPASWVMIDL 708 Score = 50.8 bits (120), Expect = 5e-005 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = +3 Query: 663 GPKRAVIPTAYTLRHGMNFRSDSLRTWDLQ 752 GP R V+P YT+RHG++++SDSLRTWD Q Sbjct: 709 GPNRTVVPMYYTIRHGLSYKSDSLRTWDFQ 738 --------------------- gnl|ti|820219058 name:POAA-aaa52h23.b1 mate_pair:818417871 (792 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_646647.1| ABC transporter G family protein [Dictyost... 65 2e-009 gb|AAL91497.1| ABC transporter AbcG11 [Dictyostelium discoi... 64 4e-009 ref|XP_646079.1| ABC transporter G family protein [Dictyost... 64 4e-009 ref|XP_646646.1| ABC transporter G family protein [Dictyost... 64 6e-009 ref|XP_629126.1| ABC transporter G family protein [Dictyost... 64 6e-009 gb|AAL91499.1| ABC transporter AbcG14 [Dictyostelium discoi... 64 8e-009 gb|AAG49401.1| unknown [Dictyostelium discoideum] 64 8e-009 ref|XP_646070.1| ABC transporter G family protein [Dictyost... 64 8e-009 gb|AAL91500.1| ABC transporter AbcG15 [Dictyostelium discoi... 63 1e-008 ref|XP_647273.1| ABC transporter G family protein [Dictyost... 63 1e-008 >ref|XP_646647.1| ABC transporter G family protein [Dictyostelium discoideum] gb|AAL91503.1| ABC transporter AbcG19 [Dictyostelium discoideum] gb|EAL71954.1| ABC transporter G family protein [Dictyostelium discoideum] Length = 1449
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 2/58 (3%) Frame = +1
G++LI +PQFI +E FKRD++SKFYS PFA++I+AVEIP ++ +F+ FW Sbjct: 1196 GILLIFVVLPQFIMQQEYFKRDFASKFYSWFPFAISIVAVEIPIVIISGTFFFFCSFW 1253 Score = 42.4 bits (98), Expect = 0.018 Identities = 16/32 (50%), Positives = 26/32 (81%) Frame = +1 Query: 46 GLVIGFTYWQIGKSTSDITLRIFAIFQMLVLG 141 GL++GFT+W + S+SD++ R+F IF+ L+LG Sbjct: 1165 GLIMGFTFWSLKGSSSDMSQRVFFIFETLILG 1196 ------------------- PP15_Resultat
mate_pair:820219074 (558 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00576391.1| AMP-dependent synthetase and ligase [Moo... 54 4e-006 ref|NP_623535.1| Acyl-CoA synthetases (AMP-forming)/AMP-aci... 52 8e-006 ref|ZP_00456945.1| AMP-dependent synthetase and ligase [Bur... 52 1e-005 emb|CAC41921.1| PROBABLE LONG-CHAIN-FATTY-ACID--COA LIGASE ... 51 2e-005 ref|ZP_00688722.1| AMP-dependent synthetase and ligase [Bur... 51 2e-005 ref|NP_703640.1| hypothetical protein [Plasmodium falciparu... 50 4e-005 ref|YP_293347.1| AMP-dependent synthetase and ligase [Ralst... 50 5e-005 ref|ZP_00202761.1| COG0318: Acyl-CoA synthetases (AMP-formi... 50 5e-005 ref|ZP_00597740.1| AMP-dependent synthetase and ligase [Ral... 49 7e-005 gb|ABB05859.1| AMP-dependent synthetase and ligase [Burkhol... 49 7e-005 >ref|ZP_00576391.1| AMP-dependent synthetase and ligase [Moorella thermoacetica ATCC 39073]
gb|EAN19779.1| AMP-dependent synthetase and ligase [Moorella thermoacetica ATCC 39073]
Length = 492 Score = 53.5 bits (127), Expect = 4e-006 Identities = 20/38 (52%), Positives = 31/38 (81%) Frame = -3
+G+ LPG E++++D D+E+P G++GE+ VRGPNVM G Sbjct: 319 IGIPLPGMEVRLVDDDDREVPRGEVGELVVRGPNVMAG 356 ------------------ gnl|ti|820219077 name:POAA-aaa52n15.b1 mate_pair:818417890 (595 letters)
Score E
Sequences producing significant alignments: (bits) Value Yüklə 3,49 Mb. Dostları ilə paylaş:
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