Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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+++GSAINQDG + ++ P+ AQ VI EAL+ A ++P D+ +LEAHGTGT LGDPIE+ Sbjct: 272 VIRGSAINQDGASGGLTVPNGVAQQRVIAEALQRAGIAPGDVDYLEAHGTGTSLGDPIEV 331
+A V A + R PL++GS+K Sbjct: 332 QAAGAVLGAGREASR-------------------------------------PLLIGSVK 354
TNIGH EAAAG++G+IKV LAL++ ++PQH+H ++ +P++P Sbjct: 355 TNIGHLEAAAGIAGVIKVILALEHGMLPQHLHFRDPSPHIP 395 Score = 116 bits (291), Expect = 9e-025 Identities = 67/175 (38%), Positives = 99/175 (56%) Frame = +2 Query: 65 ILKGSAINQDGPTTSISTPSSDAQVAVIEEALRVAQLSPNDITFLEAHGTGTPLGDPIEM 244 ++ SA+NQDG ++ ++ P+ AQ +I AL A LS +D+ +LEAHGTGT LGDPIE+ Sbjct: 1818 VIPASAVNQDGASSGLTVPNGGAQQRLIATALSRAGLSGDDVDYLEAHGTGTALGDPIEV 1877
+A V A+ +R PL++GS+K Sbjct: 1878 QAAGAVYGATRDTDR-------------------------------------PLLIGSVK 1900
TNIGH EAA+GV+GLIKV L+LQ+E++PQ +H + +P++P W S LR++ Sbjct: 1901 TNIGHLEAASGVAGLIKVVLSLQHEMLPQSLHFETPSPHIP-----WDSLPLRVV 1950 Score = 39.3 bits (90), Expect = 0.18 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +3 Query: 702 VVGVSSFGFSGTNAHIILATAP 767 V GVSSFGF+GTNAH+IL AP Sbjct: 418 VAGVSSFGFAGTNAHVILEEAP 439 Score = 36.6 bits (83), Expect = 1.2 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +3 Query: 708 GVSSFGFSGTNAHIILATAPTRV 776 GVSSFGF+GTNAH+++ AP V Sbjct: 1966 GVSSFGFTGTNAHVLIEEAPQPV 1988 --------------- gnl|ti|818416977 name:POAA-aaa71a10.b1 mate_pair:818417265 (480 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 163 2e-039 ---------- gnl|ti|818416978 name:POAA-aaa71a12.b1 mate_pair:818417266 (752 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_643266.1| protein serine/threonine phosphatase [Dict... 52 3e-005 gb|AAC34129.1| G protein alpha subunit [Sporothrix schencki... 51 3e-005 gb|AAM64110.1| G-alpha subunit [Penicillium marneffei] 51 5e-005 gb|EAL90646.1| G protein complex alpha subunit GpaA [Asperg... 50 6e-005 gb|AAT40562.1| small G-protein GPA1 [Paracoccidioides brasi... 50 6e-005 ref|XP_658255.1| guanine nucleotide-binding protein subunit... 50 6e-005 gb|AAO37686.1| heterotrimeric G protein alpha subunit TGA1 ... 50 8e-005 gb|AAH60909.1| Hypothetical protein MGC73153 [Danio rerio] ... 50 8e-005 gb|AAH49343.1| Guanine nucleotide-binding protein Gi2 alpha... 50 1e-004 gb|EAA75079.1| GBA1_CRYPA Guanine nucleotide-binding protei... 50 1e-004 >ref|XP_643266.1| protein serine/threonine phosphatase [Dictyostelium discoideum] gb|AAS38757.1| similar to Entamoeba histolytica. Protein phosphatase 2C-2 [Dictyostelium discoideum] gb|AAB70844.1| Spalten [Dictyostelium discoideum] gb|EAL69377.1| protein serine/threonine phosphatase [Dictyostelium discoideum] Length = 975
Identities = 24/59 (40%), Positives = 41/59 (69%) Frame = -3
G ESGKTT RQL+ I + P D K++Q++IYGNT++++ R +E +E+ ++ + +N Sbjct: 122 GHTESGKTTLQRQLEFIYGVTDPTDAKHYQRLIYGNTLATLIRFIENSERLNITLSPDN 180 --------- gnl|ti|818416991 name:POAA-aaa71c16.b1 mate_pair:818417279 (632 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_640601.1| protein kinase 1 [Dictyostelium discoideum... 69 9e-011 ref|XP_641374.1| putative CAM kinase [Dictyostelium discoid... 51 3e-005 ref|XP_657408.1| protein kinase, putative [Entamoeba histol... 47 6e-004 ref|XP_650626.1| protein kinase, putative [Entamoeba histol... 37 0.37 ref|NP_076445.1| secretory carrier membrane protein 2 [Ratt... 36 1.1 ref|NP_073724.1| secretory carrier membrane protein 2 [Mus ... 36 1.1 dbj|BAE36143.1| unnamed protein product [Mus musculus] 36 1.1 gb|AAG22802.1| secretory carrier membrane protein 2 [Rattus... 36 1.1 ref|XP_696325.1| PREDICTED: similar to SNF1-like kinase 2 [... 35 1.4 >ref|XP_640601.1| protein kinase 1 [Dictyostelium discoideum] gb|EAL66545.1| protein kinase 1 [Dictyostelium discoideum] Length = 595
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 3/84 (3%) Frame = +2
G +KI++I+QDC ++Q E+EQGGPQ Y++++ LGTG FASVRL + + TG ++ + Sbjct: 191 GSEKISFIYQDCFEEQKEMEQGGPQQKYDLREVLGTGNFASVRLGVEKETGNKYAIKIID 250
+S+T K+ +V TKV Sbjct: 251 KKKMSMTSKRKDSLMDEVNVLTKV 274 ------------ nl|ti|818416997 name:POAA-aaa71e04.b1 mate_pair:818417284 (887 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL31950.1| CDH1-D [Gallus gallus] 86 1e-015 ref|XP_428325.1| PREDICTED: similar to Ac1147, partial [Gal... 63 2e-008 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 57 6e-007 ref|XP_520857.1| PREDICTED: hypothetical protein XP_520857 ... 57 6e-007 ref|XP_358030.2| PREDICTED: similar to Ac1147 [Mus musculus] 57 1e-006 dbj|BAB66226.1| 109aa long hypothetical protein [Sulfolobus... 49 2e-004 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 43 0.013 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 43 0.013 ref|XP_578905.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.063 ref|XP_578906.1| PREDICTED: similar to Ac1147 [Rattus norve... 39 0.18 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451
Identities = 62/132 (46%), Positives = 71/132 (53%), Gaps = 1/132 (0%) Frame = -3
NDP+AGSPT TLLRLLLPL V + + V P L +PIGSSDGRCVQR Sbjct: 250 NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309
AGT+ST+ D LL IPR IIA P G PR +GT S C+ R Sbjct: 310 AGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSPRT 369
+Q G D PVI Sbjct: 370 SQ---GRDRPVI 378
Identities = 29/48 (60%), Positives = 35/48 (72%) Frame = -2
++A VS VIGINQTN+STN ERPCTTT+ IE LS S V+ Q+G Sbjct: 405 KHARVSFVIGINQTNRSTNKERPCTTTHGIEKELST-CSPVFVSSQKG 451 --------- gnl|ti|818417284 name:POAA-aaa71e04.g1 mate_pair:818416997 (882 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 62 3e-008 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 1e-004 gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 49 2e-004 ref|XP_453836.1| unnamed protein product [Kluyveromyces lac... 41 0.062 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.24 gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 37 0.90 gb|AAK22561.1| beta-lactamase, putative [Caulobacter cresce... 36 1.5 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 2.0 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 3.4 ref|XP_710281.1| hypothetical protein CaO19.6835 [Candida a... 33 10.0 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102
Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -3
++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 Score = 34.3 bits (77), Expect = 5.8 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 617 ACHVRSRKTTSYA*VGRSQEKSWWKVV 537 + VR+RK +YA GRSQ K WW+ V Sbjct: 43 SARVRTRKMVNYAWAGRSQRKLWWRSV 69 --------
gnl|ti|818417023 name:POAA-aaa71i20.b1 mate_pair:818417306 (671 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_629005.1| hypothetical protein DDB0219874 [Dictyoste... 75 2e-012 ref|XP_638923.1| hypothetical protein DDB0185585 [Dictyoste... 69 1e-010 ref|XP_647813.1| hypothetical protein DDB0206275 [Dictyoste... 68 2e-010 gb|AAT66503.1| kinase regulatory subunit MOB1B [Xenopus lae... 65 2e-009 ref|XP_393046.2| PREDICTED: similar to CG13852-PA [Apis mel... 63 7e-009 emb|CAA22288.1| SPBC428.13c [Schizosaccharomyces pombe] >gi... 60 6e-008 gb|EAL93533.1| protein kinase regulator (Mob1), putative [A... 60 8e-008 gb|AAS51684.1| ADL236Wp [Ashbya gossypii ATCC 10895] >gi|45... 60 8e-008 ref|XP_455252.1| unnamed protein product [Kluyveromyces lac... 59 1e-007 ref|XP_657487.1| Mob1/phocein family protein [Entamoeba his... 57 4e-007 >ref|XP_629005.1| hypothetical protein DDB0219874 [Dictyostelium discoideum] gb|EAL60665.1| hypothetical protein DDB0219874 [Dictyostelium discoideum] Length = 216 Score = 74.7 bits (182), Expect = 2e-012 Identities = 41/105 (39%), Positives = 52/105 (49%) Frame = -1
+T KPKK IK G+KQY L +K +LG G + D IKLPP Sbjct: 10 QTFKPKKSIKKGTKQYELHQKIKETLGSG-DLTDAIKLPP-------------------- 48
DE L EW+++NTI+ +N NL YG + FCTP CP Sbjct: 49 ---------DETLFEWLSVNTIDFFNQSNLLYGSITEFCTPKYCP ---------- gnl|ti|818417306 name:POAA-aaa71i20.g1 mate_pair:818417023 (878 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_629005.1| hypothetical protein DDB0219874 [Dictyoste... 75 4e-012 ref|XP_638923.1| hypothetical protein DDB0185585 [Dictyoste... 70 9e-011 ref|XP_647813.1| hypothetical protein DDB0206275 [Dictyoste... 68 4e-010 gb|AAT66503.1| kinase regulatory subunit MOB1B [Xenopus lae... 65 4e-009 ref|XP_393046.2| PREDICTED: similar to CG13852-PA [Apis mel... 63 1e-008 emb|CAA22288.1| SPBC428.13c [Schizosaccharomyces pombe] >gi... 60 1e-007 gb|EAL93533.1| protein kinase regulator (Mob1), putative [A... 60 1e-007 gb|AAS51684.1| ADL236Wp [Ashbya gossypii ATCC 10895] >gi|45... 60 1e-007 ref|XP_455252.1| unnamed protein product [Kluyveromyces lac... 59 2e-007 ref|XP_657487.1| Mob1/phocein family protein [Entamoeba his... 57 6e-007 >ref|XP_629005.1| hypothetical protein DDB0219874 [Dictyostelium discoideum] gb|EAL60665.1| hypothetical protein DDB0219874 [Dictyostelium discoideum] Length = 216 Score = 74.7 bits (182), Expect = 4e-012 Identities = 41/105 (39%), Positives = 52/105 (49%) Frame = -3
+T KPKK IK G+KQY L +K +LG G + D IKLPP Sbjct: 10 QTFKPKKSIKKGTKQYELHQKIKETLGSG-DLTDAIKLPP-------------------- 48
DE L EW+++NTI+ +N NL YG + FCTP CP Sbjct: 49 ---------DETLFEWLSVNTIDFFNQSNLLYGSITEFCTPKYCP 84 --------- gnl|ti|818417308 name:POAA-aaa71k06.g1 mate_pair:818417025 (323 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB92658.1| glutaredoxin type I [Fritillaria agrestis] >... 54 2e-006 gb|AAD43253.1| peptide methionine sulfoxide reductase [Grac... 52 6e-006 ref|XP_501474.1| hypothetical protein [Yarrowia lipolytica]... 52 6e-006 ref|NP_179617.1| arsenate reductase (glutaredoxin)/ electro... 51 1e-005 gb|AAM64584.1| putative glutaredoxin [Arabidopsis thaliana] 51 1e-005 ref|XP_414371.1| PREDICTED: similar to TXNRD3 protein [Gall... 51 1e-005 emb|CAA54397.1| glutaredoxin [Oryza sativa] 51 1e-005 gb|AAL04507.1| glutaredoxin [Tilia platyphyllos] 51 1e-005 ref|XP_473118.1| OSJNBa0043L24.17 [Oryza sativa (japonica c... 51 1e-005 gb|AAS54082.1| AFR710Wp [Ashbya gossypii ATCC 10895] >gi|45... 50 2e-005 >gb|AAB92658.1| glutaredoxin type I [Fritillaria agrestis] gb|AAB92657.1| glutaredoxin type I [Fritillaria agrestis] gb|AAB92656.1| glutaredoxin type I [Fritillaria agrestis] gb|AAB92655.1| glutaredoxin type I [Fritillaria agrestis] gb|AAB92654.1| glutaredoxin type II [Fritillaria agrestis] gb|AAB92419.1| glutaredoxin type 1 [Fritillaria agrestis] Length = 104 Score = 53.5 bits (127), Expect = 2e-006 Identities = 29/64 (45%), Positives = 39/64 (60%) Frame = -2
L ++G+AIQ +LA+ TGQRTVPN+FI G+HIGG D T+ L+N Sbjct: 47 LESDGSAIQAALAEWTGQRTVPNVFIGGKHIGGCD------------------KTMELYN 88
SG+L
Sbjct: 89 SGKL 92 --------
gnl|ti|818417039 name:POAA-aaa71m14.b1 mate_pair:818417321 (670 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAB56748.2| cytoplasmic dynein heavy chain 1b [Chlamydo... 61 4e-008 gb|AAC99457.1| dynein heavy chain isoform DHC1b [Chlamydomo... 61 4e-008 tpg|DAA01366.1| TPA: cytoplasmic dynein heavy chain 1b [Try... 58 2e-007 gb|EAN79214.1| dynein heavy chain, putative [Trypanosoma br... 58 2e-007 gb|AAV37189.1| cytoplasmic dynein heavy chain 2 protein [Te... 58 3e-007 gb|AAB81841.1| cytoplasmic dynein heavy chain 1b [Tetrahyme... 58 3e-007 gb|AAU93603.1| cytoplasmic dynein heavy chain 2.2 [Leishman... 57 5e-007 gb|AAZ09922.1| dynein heavy chain, putative [Leishmania maj... 57 7e-007 gb|AAZ10647.1| dynein heavy chain, putative [Trypanosoma br... 56 9e-007 emb|CAJ08142.1| dynein heavy chain, putative [Leishmania ma... 56 9e-007 >emb|CAB56748.2| cytoplasmic dynein heavy chain 1b [Chlamydomonas reinhardtii] Length = 4334
Identities = 36/91 (39%), Positives = 51/91 (56%) Frame = +2
TW Y + + L+Y + + +G+ GYGG PYGPAGTGK ESVKALGQ Sbjct: 1706 TWEY-------QGNAAKLVYTPLTDKCYLTLTQGMALGYGGNPYGPAGTGKTESVKALGQ 1758
AL QV ++ + +F F ++ RI + + C Sbjct: 1759 ALARQVLVFNCDEEFDF-KSMGRIFVGLVKC 1788 ----------------- gnl|ti|818417321 name:POAA-aaa71m14.g1 mate_pair:818417039 (889 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_075413.1| dynein, cytoplasmic, heavy polypeptide 2 [... 108 2e-022 ref|NP_084127.2| dynein, cytoplasmic, heavy chain 2 [Mus mu... 108 2e-022 ref|XP_370652.3| PREDICTED: dynein, cytoplasmic, heavy poly... 108 2e-022 ref|XP_417173.1| PREDICTED: similar to dynein, cytoplasmic,... 107 4e-022 gb|AAZ10647.1| dynein heavy chain, putative [Trypanosoma br... 102 1e-020 gb|AAX70620.1| dynein heavy chain, putative [Trypanosoma br... 102 1e-020 gb|EAN95856.1| dynein heavy chain, putative [Trypanosoma cr... 102 2e-020 emb|CAJ08142.1| dynein heavy chain, putative [Leishmania ma... 101 3e-020 gb|AAU93604.1| cytoplasmic dynein heavy chain 2.1 [Leishman... 101 3e-020 emb|CAB56748.2| cytoplasmic dynein heavy chain 1b [Chlamydo... 101 4e-020 >ref|NP_075413.1| dynein, cytoplasmic, heavy polypeptide 2 [Rattus norvegicus] dbj|BAA97048.1| cytoplasmic dynein heavy chain [Rattus norvegicus] Length = 4306 Score = 108 bits (270), Expect = 2e-022 Identities = 49/61 (80%), Positives = 58/61 (95%) Frame = -2
+IDPEW+ESLNSVLDDNRLLT+P+GERIQFGPNVNF+FETH+L+ ASPAT+SRMGMI L Sbjct: 2057 DIDPEWIESLNSVLDDNRLLTMPSGERIQFGPNVNFVFETHDLSCASPATISRMGMIFLS 2116
+ Sbjct: 2117 D 2117 Score = 33.9 bits (76), Expect = 7.7 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -1
IFLSDE+ ++ +L+ +WL Q + R+ L W Sbjct: 2113 IFLSDEETDLNSLIKSWLRNQPVEYRSNLENW 2144 ------------ gnl|ti|818417050 name:POAA-aaa71o16.b1 (858 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAB80456.1| heat shock protein 70 like protein [Arabido... 94 8e-018 dbj|BAD94381.1| heat shock protein 70 like protein [Arabido... 94 8e-018 ref|NP_195504.2| MTHSC70-1; ATP binding [Arabidopsis thalia... 94 8e-018 emb|CAF94902.1| unnamed protein product [Tetraodon nigrovir... 94 8e-018 emb|CAG31145.1| hypothetical protein [Gallus gallus] >gi|57... 93 1e-017 ref|XP_806221.1| heat shock 70 kDa protein, mitochondrial p... 93 1e-017 ref|XP_806165.1| heat shock 70 kDa protein, mitochondrial p... 93 1e-017 ref|XP_804120.1| heat shock 70 kDa protein, mitochondrial p... 93 1e-017 dbj|BAE21690.1| unnamed protein product [Mus musculus] 92 2e-017 dbj|BAE23238.1| unnamed protein product [Mus musculus] 92 2e-017 >emb|CAB80456.1| heat shock protein 70 like protein [Arabidopsis thaliana] emb|CAB37531.1| heat shock protein 70 like protein [Arabidopsis thaliana] Length = 666 Score = 93.6 bits (231), Expect = 8e-018 Identities = 44/60 (73%), Positives = 54/60 (90%) Frame = +3
IKVLQGEREMAADN++LG F L G+PP RG+PQIEVTF+IDA+G+T V+AKDKATG+E+ Sbjct: 466 IKVLQGEREMAADNKVLGEFDLVGIPPAPRGMPQIEVTFDIDANGITTVSAKDKATGKEQ 525 Score = 34.7 bits (78), Expect = 4.3 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +3 Query: 90 AADNQMLGRFTLDSLPPLQRGVPQTD*T 173 AADN++LG F L +PP RG+PQ + T Sbjct: 476 AADNKVLGEFDLVGIPPAPRGMPQIEVT 503 ---------------- PP21_Resultat gnl|ti|818417632 name:POAA-aaa70e03.b1 mate_pair:820218808 (907 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 54 1e-005 ref|XP_453836.1| unnamed protein product [Kluyveromyces lac... 43 0.016 gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 39 0.30 ref|YP_056023.1| exodeoxyribonuclease V beta chain [Propion... 38 0.97 gb|EAN31003.1| hypothetical protein TP03_0268 [Theileria pa... 37 1.3 ref|XP_214761.2| PREDICTED: similar to MT-MC1 [Rattus norve... 35 4.2 emb|CAF99319.1| unnamed protein product [Tetraodon nigrovir... 35 4.2 ref|NP_192755.1| unknown protein [Arabidopsis thaliana] >gi... 35 7.5 >gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 124 Score = 53.9 bits (119), Expect = 1e-005 Identities = 22/40 (55%), Positives = 26/40 (65%) Frame = +2
MT G+W WK SAKECVT H PN + LKMD + Y+A Sbjct: 1 MTVGRWSWKSKSAKECVTTHLPNELALKMDGAKADYRYQA 40 ------------------ nl|ti|820218808 name:POAA-aaa70e03.g1 mate_pair:818417632 (878 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pis... 59 2e-007 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 59 3e-007 gb|AAR25995.1| putative senescence-associated protein [Pyru... 57 1e-006 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 55 6e-006 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 52 3e-005 ref|XP_665229.1| senescence-associated protein [Cryptospori... 51 1e-004 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 50 2e-004 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 48 8e-004 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 48 8e-004 gb|EAA21327.1| putative senescence-associated protein [Plas... 46 0.002 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282 Score = 59.4 bits (132), Expect = 2e-007 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +2
FCF MIGRADIEGSKS+VAMNAW PQAS Sbjct: 87 FCFTMIGRADIEGSKSNVAMNAWLPQAS 114 ----------- gnl|ti|820218811 name:POAA-aaa70e09.g1 mate_pair:818417635 (904 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_061942.2| WD repeat domain 5B [Homo sapiens] >gi|276... 48 9e-004 emb|CAH89912.1| hypothetical protein [Pongo pygmaeus] 48 9e-004 dbj|BAA92110.1| unnamed protein product [Homo sapiens] 48 9e-004 ref|XP_516691.1| PREDICTED: similar to WD repeat domain 5B ... 48 9e-004 gb|AAH77844.1| Wdr5-prov protein [Xenopus laevis] 47 0.002 gb|AAH81008.1| Wdr5-b-prov protein [Xenopus laevis] >gi|567... 47 0.002 emb|CAG32147.1| hypothetical protein [Gallus gallus] >gi|57... 47 0.002 emb|CAF91370.1| unnamed protein product [Tetraodon nigrovir... 47 0.002 ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [... 47 0.002 dbj|BAE25694.1| unnamed protein product [Mus musculus] 47 0.002 >ref|NP_061942.2| WD repeat domain 5B [Homo sapiens] gb|AAH43494.1| WD repeat domain 5B [Homo sapiens] emb|CAG33560.1| WDR5B [Homo sapiens] Length = 330 Score = 47.6 bits (104), Expect = 9e-004 Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Frame = +3
V C P SN I++ S D+T+KIW+ G+CL + AH+DPVS Sbjct: 128 VFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVS 171 Score = 40.0 bits (86), Expect = 0.17 Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%) Frame = +3 Query: 186 VNACAITPDSNRIV-ASGDKTIKIWDASYGQCLHSWEAHTDPV 311 ++ A + DS+R+V AS DKT+K+WD G+CL + + H++ V Sbjct: 86 ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYV 128 ----------- gnl|ti|820218821 name:POAA-aaa70g05.g1 mate_pair:818417645 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAO52258.1| similar to Plasmodium falciparum. Hypothetic... 77 1e-012 ref|XP_643862.1| hypothetical protein DDB0217641 [Dictyoste... 77 1e-012 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 37 1.3 ref|ZP_00512238.1| conserved hypothetical protein [Chlorobi... 35 4.1 ref|XP_418180.1| PREDICTED: similar to glycoprotein Ib [Gal... 35 7.4 Yüklə 3,49 Mb. Dostları ilə paylaş:
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