P. Mahé, N. Ueda, T. Akutsu, J.-L. Perret and J.-P. Vert, "Graph kernels for molecular structure-activity relationship analysis with support vector machines", Journal of Chemical Information and Modeling, 2005, vol.45(4), pp. 939-951.
P. Mahé, L. Ralaivola, V. Stoven and J.-P. Vert, "The pharmacophore kernel for virtual screening with support vector machines", Journal of Chemical Information and Modeling, 2006, to appear.
Conferences:
P. Mahé, N. Ueda, T. Akutsu, J.-L. Perret and J.-P. Vert, "Extensions of marginalized graph kernels", Proceedings of the 21st International Conference of Machine Learning, 2004.
P. Mahé, N. Ueda, T. Akutsu, J.-L. Perret and J.-P. Vert, "QSAR analysis with SVM and graph kernels", posters presented at the Conference on Chemoinformatics, Sheffield 2004 and the Genome Informatics Workshop, Tokyo 2004.