Supplementary material 1



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Transport reactions

  1. pextra + hextra=p + h

  2. nhextra = nh

  3. soextra + hextra=so + h

  4. h=hextra


Macromolecular synthesis

Protein

  1. coeffglut * glut + coeffglum * glum + coeffpro * pro + coeffarg * arg + coefflys * lys + coeffser * ser + coeffgly * gly + coeffcys * cys + coeffasp * asp + coeffasn * asn + coeffthr * thr + coeffmet * met + coeffileu * ileu + coeffala * ala + coeffval * val + coeffleu * leu + coeffphe * phe + coefftyr * tyr + coefftry * try + coeffhis * his + (2 *coeffglut +2 * coeffglum + 2 *coeffpro + 2 *coeffarg + 2 *coefflys + 2 *coeffser +2 * coeffgly + 2 *coeffcys + 2 *coeffasp + 2 *coeffasn + 2 *coeffthr + 2 *coeffmet + 2 *coeffileu + 2 *coeffala + 2 *coeffval + 2 *coeffleu + 2 *coeffphe + 2 *coefftyr + 2 *coefftry + 2 *coeffhis + n + 2 * nb) * atp + (2 * coeffglut + 2 * coeffglum + 2 * coeffpro + 2 * coeffarg + 2 * coefflys + 2 * coeffser + 2 * coeffgly + 2 * coeffcys + 2 * coeffasp + 2 * coeffasn + 2 * coeffthr + 2 * coeffmet + 2 * coeffileu + 2 * coeffala + 2 * coeffval + 2 * coeffleu + 2 * coeffphe + 2 * coefftyr + 2 * coefftry + 2 * coeffhis + 3 * nb)* gtp + (4 *coeffglut + 4 * coeffglum + 4 *coeffpro + 4 *coeffarg + 4 *coefflys + 4 *coeffser + 4 * coeffgly + 4 *coeffcys + 4 *coeffasp + 4 *coeffasn + 4 *coeffthr + 4 *coeffmet + 4 *coeffileu + 4 *coeffala + 4 *coeffval + 4 *coeffleu + 4 *coeffphe + 4 *coefftyr + 4 *coefftry + 4 *coeffhis + n + 5 * nb)* eau=protein + (2 * coeffglut + 2 * coeffglum + 2 * coeffpro + 2 * coeffarg + 2 * coefflys + 2 * coeffser + 2 * coeffgly + 2 * coeffcys + 2 * coeffasp + 2 * coeffasn + 2 * coeffthr + 2 * coeffmet + 2 * coeffileu + 2 * coeffala + 2 * coeffval + 2 * coeffleu + 2 * coeffphe + 2 * coefftyr + 2 * coefftry + 2 * coeffhis + n + 2 * nb) * adp + (2 * coeffglut + 2 * coeffglum + 2 * coeffpro + 2 * coeffarg + 2 * coefflys + 2 * coeffser + 2 * coeffgly + 2 * coeffcys + 2 * coeffasp + 2 * coeffasn + 2 * coeffthr + 2 * coeffmet + 2 * coeffileu + 2 * coeffala + 2 * coeffval + 2 * coeffleu + 2 * coeffphe + 2 * coefftyr + 2 * coefftry + 2 * coeffhis + 3 * nb ) * gdp + (4 *coeffglut + 4 * coeffglum + 4 *coeffpro + 4 *coeffarg + 4 *coefflys + 4 *coeffser + 4 * coeffgly + 4 *coeffcys + 4 *coeffasp + 4 *coeffasn + 4 *coeffthr + 4 *coeffmet + 4 *coeffileu + 4 *coeffala + 4 *coeffval + 4 *coeffleu + 4 *coeffphe + 4 *coefftyr + 4 *coefftry + 4 *coeffhis + n + 5 * nb)* p + (4 *coeffglut + 4 * coeffglum + 4 *coeffpro + 4 *coeffarg + 4 *coefflys + 4 *coeffser + 4 * coeffgly + 4 *coeffcys + 4 *coeffasp + 4 *coeffasn + 4 *coeffthr + 4 *coeffmet + 4 *coeffileu + 4 *coeffala + 4 *coeffval + 4 *coeffleu + 4 *coeffphe + 4 *coefftyr + 4 *coefftry + 4 *coeffhis + n + 5 * nb)* h


RNA

  1. coeffatp * atp + coeffgtp * gtp + coeffutp * utp + coeffctp * ctp + (coeffatp + coeffgtp + coeffutp + coeffctp) * eau=rna + (2*coeffatp + 2*coeffgtp + 2*coeffutp + 2*coeffctp) * p


DNA

  1. coeffdatp * datp + coeffdgtp * dgtp + coeffdctp * dctp + coeffdttp * dttp + (coeffdatp + coeffdgtp + coeffdctp + coeffdttp) * eau=dna + (2*coeffdatp + 2*coeffdgtp + 2*coeffdctp + 2*coeffdttp) * p


Lipids

Phosphatidate

  1. (coeffpalpa /2+ coeffstepa / 2) * g3p + coeffpalpa *palmitate + coeffstepa * stearate = phosphatidate + (coeffpalpa + coeffstepa) * eau


Phosphatidylinositol

  1. (coeffpalpi /2+ coeffstepi / 2) * glcp + (coeffpalpi /2+ coeffstepi / 2) * glyc + coeffpalpi * palmitate + coeffstepi * stearate + (coeffpalpi *5/2+ coeffstepi * 5 / 2) * atp + (coeffpalpi + coeffstepi) * eau=phosphatidylinositol + (coeffpalpi *5/2+ coeffstepi* 5 / 2) * adp + (coeffpalpi *5/2+ coeffstepi * 5 / 2) * p + (coeffpalpi + coeffstepi) * h


Phosphatidylserine

  1. (coeffpalps /2+ coeffsteps / 2) * ser + (coeffpalps /2+ coeffsteps / 2) * g3p + coeffpalps * palmitate + coeffsteps * stearate + (coeffpalps + coeffsteps ) * atp =phosphatidylserine + (coeffpalps + coeffsteps ) * adp + (coeffpalps + coeffsteps) * p + (coeffpalps / 2 + coeffsteps / 2) * eau


Phosphatidylcholine

  1. (coeffpalpc/2 + coeffstepc / 2) * ser + (coeffpalpc /2+ coeffstepc / 2) * glyc + coeffpalpc * palmitate + coeffstepc * stearate + (10*coeffpalpc + coeffstepc * 10) * atp + (5*coeffpalpc + coeffstepc * 5) * eau + (3*coeffpalpc + coeffstepc * 3) * nadh + (coeffpalpc *3/2+ coeffstepc * 3 / 2) * nadph + (coeffpalpc + coeffstepc) * co=phosphatidylcholine + (10*coeffpalpc + coeffstepc * 10) * adp + (coeffpalpc*19/2 + coeffstepc * 19 / 2) * p+(3*coeffpalpc + coeffstepc * 3) * nad + (coeffpalpc *3/2+ coeffstepc * 3 / 2) * nadp + (coeffpalpc *7/2+ coeffstepc * 7 / 2) * h


Phosphatidylethanolamine

  1. (coeffpalpe /2+ coeffstepe / 2) * ser + (coeffpalpe /2+ coeffstepe / 2) * g3p + coeffpalpe * palmitate + coeffstepe * stearate + (coeffpalpe + coeffstepe ) * atp = phosphatidylethanolamine + (coeffpalpe / 2 + coeffstepe / 2) * co + (coeffpalpe + coeffstepe ) * adp + (coeffpalpe + coeffstepe) * p + (coeffpalpe / 2 + coeffstepe / 2) * eau


Phosphatidylglycerol

  1. (coeffpalpg/2 + coeffstepg/2) * g3p + coeffpalpg * palmitate + coeffstepg *stearate + (coeffpalpg + coeffstepg) * atp = phosphatidylglycerol + (coeffpaldpg + coeffstedpg) * adp + (coeffpaldpg *3 / 2+ coeffstedpg * 3 / 2) * p


Diphosphatidylglycerol

  1. (coeffpaldpg + coeffstedpg) * g3p + coeffpaldpg * palmitate + coeffstedpg *stearate + (coeffpaldpg + coeffstedpg) * atp = diphosphatidylglycerol + (coeffpaldpg / 4 + coeffstedpg / 4) * glyc + (coeffpaldpg + coeffstedpg) * adp + (coeffpaldpg *6/4+ coeffstedpg * 6 / 4) * p


Lipids

  1. coeffpa * phosphatidate + coeffpe * phosphatidylethanolamine + coeffps * phosphatidylserine + coeffpi * phosphatidylinositol + coeffdpg * diphosphatidylglycerol + coeffpc * phosphatidylcholine + coeffpg * phosphatidylglycerol = lipids



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