Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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troglodytes] Length = 128
Identities = 30/62 (48%), Positives = 35/62 (56%) Frame = +1
+A A K + ++QERKL VRRRSDTVV TINDAD V + K V GF G Sbjct: 44 RAKAFAKNVFINQERKLEVRRRSDTVVIPTINDADWRCGGVIPMTRWAASKKPVLGFLGS 103
G Sbjct: 104 KG 105 ------------------------------- gnl|ti|818419444 name:POAA-aaa31a14.b1 (487 letters) Score E
Sequences producing significant alignments: (bits) Value ref|YP_103386.1| hypothetical protein BMA1771 [Burkholderia... 132 6e-030 emb|CAE59742.1| Hypothetical protein CBG03185 [Caenorhabdit... 86 6e-016 emb|CAE70435.1| Hypothetical protein CBG17011 [Caenorhabdit... 85 1e-015 ref|YP_103231.1| hypothetical protein BMA1591 [Burkholderia... 76 5e-013 ref|ZP_00731970.1| hypothetical protein AsucDRAFT_1199 [Act... 74 2e-012 ref|XP_800438.1| PREDICTED: hypothetical protein XP_795345 ... 72 7e-012 gb|EAA15705.1| retinitis pigmentosa GTPase regulator-like p... 67 2e-010 ref|XP_734491.1| hypothetical protein PC106124.00.0 [Plasmo... 64 2e-009 gb|AAL78897.1| merozoite surface protein-9 precursor [Plasm... 61 1e-008 ref|YP_106469.1| hypothetical protein BMAA1945 [Burkholderi... 61 1e-008 >ref|YP_103386.1| hypothetical protein BMA1771 [Burkholderia mallei ATCC 23344] gb|AAU48214.1| hypothetical protein BMA1771 [Burkholderia mallei ATCC 23344] Length = 307
Identities = 85/147 (57%), Positives = 93/147 (63%), Gaps = 3/147 (2%) Frame = -3
PL + N R R ++ + A+R T N E RT NAE T NA ER T NA T NA Sbjct: 94 PLAALNRRRARRSESERRTPNAERRTPNAERRTP-NAERRTPNA--ERRTPNAERRTPNA 150
ER T N + RT NAER+T NAERR NAERRT NAERR NAERR NAERR NAE RT Sbjct: 151 ERRTPNAERRTPNAERRTPNAERRTPNAERRTPNAERRTPNAERRTPNAERRTPNAERRT 210
NAERR NAERRT NAE RT + R Sbjct: 211 PNAERRTPNAERRTPNAERRTPNAERR 237 ------------------------- gnl|ti|820220597 name:POAA-aaa31c02.g1 (601 letters) Score E Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 151 2e-035 gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 102 6e-021 pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 86 1e-015 ref|ZP_00374729.1| conserved hypothetical protein [Wolbachi... 74 4e-012 sp|P03845|YPA1_ECOLI Hypothetical protein 1 64 4e-009 sp|P03846|YPF1_ECOLI Hypothetical protein 1 60 4e-008 gb|AAR02632.1| conserved hypothetical protein [Salmonella t... 60 6e-008 pir||QQECP3 hypothetical protein 1 - Escherichia coli plasm... 59 1e-007 ref|YP_355421.1| hypothetical protein pCollet_06 [Escherich... 58 2e-007 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 57 4e-007 >sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein Length = 84 Score = 151 bits (381), Expect = 2e-035 Identities = 73/83 (87%), Positives = 75/83 (90%) Frame = -2
H+PPVQPDRCA SGNY +ESNPVRHDLSPLAAATGNRISRARYVGGAT FLK W YGY Sbjct: 2 HEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYT 61
RRTVFGICA LKPVTFGKRVGSS Sbjct: 62 RRTVFGICALLKPVTFGKRVGSS 84 ------------------------------------ gnl|ti|820220636 name:POAA-aaa31i12.g1 mate_pair:818419476 (923 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 68 4e-010 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 60 8e-008 gb|EAA21327.1| putative senescence-associated protein [Plas... 52 4e-005 ref|XP_767406.1| hypothetical protein GLP_748_1200_211 [Gia... 50 8e-005 gb|AAK21974.1| rRNA promoter binding protein [Rattus norveg... 45 0.003 emb|CAB52874.1| SPCC830.01c [Schizosaccharomyces pombe] 42 0.030 ref|NP_588472.2| hypothetical protein SPCC1620.14c [Schizos... 42 0.030 pir||A35664 PpoI endonuclease - slime mold (Physarum polyce... 40 0.15 gb|AAB65764.1| endonuclease [Physarum polycephalum] 40 0.15 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 39 0.20 >ref|XP_578859.1| PREDICTED: similar to hypothetical protein [Rattus norvegicus] Length = 135
Identities = 33/45 (73%), Positives = 36/45 (80%) Frame = +2
+P DDEAFGYLKRVIVTPAVYP + F HF+IQSTGQKS V T Sbjct: 69 VPGADDEAFGYLKRVIVTPAVYPRFIEFLHFDIQSTGQKSHRVNT 113 ----------------------- gnl|ti|818419484 name:POAA-aaa31k14.b1 mate_pair:820220647 (257 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAL36986.1| sub-family C member 2 ATP-binding cassette p... 49 4e-005 ref|NP_038834.1| ATP-binding cassette, sub-family C, member... 49 4e-005 gb|AAL36985.1| sub-family C member 2 ATP-binding cassette p... 49 4e-005 ref|NP_036965.1| ATP-binding cassette, sub-family C (CFTR/M... 47 2e-004 dbj|BAA13016.1| canalicular multispecific organic anion tra... 47 2e-004 ref|XP_421698.1| PREDICTED: similar to canalicular multispe... 47 2e-004 ref|XP_696904.1| PREDICTED: similar to ATP-binding cassette... 46 4e-004 ref|XP_696750.1| PREDICTED: similar to ATP-binding cassette... 46 4e-004 emb|CAC86597.1| multidrug resistance associated protein 3 [... 46 4e-004 ref|NP_001003081.1| ATP-binding cassette, sub-family C (CFT... 45 6e-004 >gb|AAL36986.1| sub-family C member 2 ATP-binding cassette protein [Mus musculus] Length = 1543
Identities = 21/32 (65%), Positives = 25/32 (78%) Frame = +3
+DNIL GS YDE KYQ + ACAL+PDL +LP Sbjct: 714 KDNILFGSEYDEKKYQRVIEACALLPDLEMLP 745 -------------------- gnl|ti|818419490 name:POAA-aaa31m06.b1 mate_pair:820220655 (521 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAL91496.1| ABC transporter AbcG10 [Dictyostelium discoi... 48 2e-004 ref|XP_629362.1| ABC transporter G family protein [Dictyost... 48 2e-004 ref|XP_646070.1| ABC transporter G family protein [Dictyost... 45 0.001 gb|AAL91497.1| ABC transporter AbcG11 [Dictyostelium discoi... 45 0.001 ref|XP_646079.1| ABC transporter G family protein [Dictyost... 45 0.001 ref|XP_629126.1| ABC transporter G family protein [Dictyost... 44 0.002 gb|AAL91500.1| ABC transporter AbcG15 [Dictyostelium discoi... 44 0.002 ref|XP_647273.1| ABC transporter G family protein [Dictyost... 44 0.002 gb|AAO51417.1| similar to Dictyostelium discoideum (Slime m... 44 0.003 ref|XP_644743.1| ABC transporter G family protein [Dictyost... 44 0.003 >gb|AAL91496.1| ABC transporter AbcG10 [Dictyostelium discoideum] Length = 1466
Identities = 24/49 (48%), Positives = 34/49 (69%) Frame = +2
+F+Y+ +P YFLEGV+TSVLK+V V C +L +FS +P L C +F Sbjct: 1349 KFVYHSNPCRYFLEGVVTSVLKNVFVDCSNEDLTKFS-NPTNLTCKEYF 1396 ----------------------------- gnl|ti|818419507 name:POAA-aaa31o24.b1 mate_pair:820220667 (642 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00571709.1| hypothetical protein Franean1DRAFT_2202 ... 62 1e-008 ref|NP_848394.1| unknown [Choristoneura fumiferana MNPV] >g... 59 9e-008 ref|NP_298553.2| hypothetical protein XF1264 [Xylella fasti... 58 2e-007 ref|XP_464070.1| putative extensin precursor [Oryza sativa ... 57 4e-007 gb|AAM44925.1| putative protein kinase [Arabidopsis thalian... 56 8e-007 gb|ABA64469.1| DNA-dependent RNA polymerase II largest subu... 56 1e-006 ref|YP_294122.1| putative membrane protein [Emiliania huxle... 55 1e-006 gb|AAH34003.1| KIAA1205 protein [Homo sapiens] 55 2e-006 dbj|BAA86519.1| KIAA1205 protein [Homo sapiens] 55 2e-006 ref|XP_046305.4| PREDICTED: KIAA1205 [Homo sapiens] 55 2e-006 >ref|ZP_00571709.1| hypothetical protein Franean1DRAFT_2202 [Frankia sp. EAN1pec] gb|EAN14080.1| hypothetical protein Franean1DRAFT_2202 [Frankia sp. EAN1pec] Length = 350 Score = 62.4 bits (150), Expect = 1e-008 Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Frame = +3
PS PS+P+ P PS S P PS PSTP S PSTPS S PSTPS +T P S P+ Sbjct: 276 PSTPSTPS-TPPSVPSTPSTPSAPSTPSTPPSVPSTPSTPSTPSTPSTPSTPSTPPSVPS 334
PS P T+P
Sbjct: 335 TPSTPPPAGDTVP 347 ----------------------------- gnl|ti|818422274 name:POAA-aaa32d13.g1 mate_pair:818422751 (792 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_641395.1| 2-oxoglutarate dehydrogenase E1 component ... 54 8e-006 ref|ZP_00538183.1| 2-oxoglutarate dehydrogenase, E1 compone... 39 0.20 gb|AAK22326.1| 2-oxoglutarate dehydrogenase, E1 component [... 37 0.75 ref|XP_663175.1| hypothetical protein AN5571.2 [Aspergillus... 37 0.98 gb|EAL89627.1| 2-oxoglutarate dehydrogenase complex alpha s... 36 1.7 ref|YP_175610.1| 2-oxoglutarate dehydrogenase E1 component ... 36 1.7 gb|EAA73635.1| conserved hypothetical protein [Gibberella z... 35 2.2 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 2.9 ref|ZP_00842655.1| putative alpha-ketoglutarate dehydrogena... 35 3.7 ref|XP_803011.1| 2-oxoglutarate dehydrogenase subunit, puta... 34 6.4 >ref|XP_641395.1| 2-oxoglutarate dehydrogenase E1 component [Dictyostelium discoideum] gb|EAL67403.1| oxoglutarate dehydrogenase (succinyl-transferring) [Dictyostelium discoideum] Length = 900 Score = 53.5 bits (127), Expect = 8e-006 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +2
+KY+GRPPL+ASAIG+S+ HKKEV LL DAFN Sbjct: 867 IKYIGRPPLAASAIGISSIHKKEVSQLLIDAFN 899 ---------------------------------------------- gnl|ti|818422769 name:POAA-aaa32h13.b1 mate_pair:818422294 (283 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes g... 52 8e-006 ref|XP_417173.1| PREDICTED: similar to dynein, cytoplasmic,... 49 4e-005 dbj|BAC86194.1| unnamed protein product [Homo sapiens] 49 7e-005 ref|XP_370652.3| PREDICTED: dynein, cytoplasmic, heavy poly... 49 7e-005 emb|CAH91493.1| hypothetical protein [Pongo pygmaeus] 47 2e-004 dbj|BAE17138.1| hypothetical protein [Homo sapiens] 46 3e-004 ref|XP_851166.1| PREDICTED: similar to dynein, cytoplasmic,... 45 6e-004 ref|XP_863210.1| PREDICTED: similar to dynein, cytoplasmic,... 45 6e-004 ref|XP_863187.1| PREDICTED: similar to dynein, cytoplasmic,... 45 6e-004 ref|XP_536596.2| PREDICTED: similar to dynein, cytoplasmic,... 45 6e-004 >gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes gratilla] Length = 4318
Identities = 27/64 (42%), Positives = 38/64 (59%) Frame = -3
+ K++ +AEK ENR+LRK KV L+ D L +WK G++EIRG+ +LE Sbjct: 677 ITKLQAAAEKLTTENRRLRKWHYTVCDKVVSLMSIDLLRQQPRWKEGLQEIRGIMASLES 736
QG K
Sbjct: 737 QGYK 740 ------------------------------------- gnl|ti|818422322 name:POAA-aaa32l21.g1 mate_pair:818422793 (480 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_487540.1| PREDICTED: hypothetical protein XP_487540 ... 62 5e-009 dbj|BAC85679.1| unnamed protein product [Homo sapiens] 59 8e-008 ref|XP_734018.1| hypothetical protein PC404981.00.0 [Plasmo... 58 1e-007 emb|CAF96846.1| unnamed protein product [Tetraodon nigrovir... 56 4e-007 ref|NP_033302.1| simple repeat sequence-containing transcri... 55 6e-007 ref|XP_225567.3| PREDICTED: similar to calcium/calmodulin-d... 55 1e-006 ref|XP_647661.1| hypothetical protein DDB0189881 [Dictyoste... 53 4e-006 ref|XP_668166.1| cdc2-related protein kinase [Cryptosporidi... 52 7e-006 ref|XP_346082.2| PREDICTED: similar to 40S ribosomal protei... 52 7e-006 dbj|BAB27448.3| unnamed protein product [Mus musculus] 52 9e-006 >ref|XP_487540.1| PREDICTED: hypothetical protein XP_487540 [Mus musculus] Length = 461
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Frame = +2
VSL +PV P P+SL+P P+SL+P P+SL+P P+SL+P P SL+P P S Sbjct: 299 VSLYPCIPVSLYPCIPVSLYPCIPVSLYPCIPVSLYPCIPVSLYPWTPGSLYPCIPVS-- 356
L + V+ Y + I P+ P SL Sbjct: 357 --LYPCTPVSLYPCIPIPPYPYSPVSL 381 ----------------------------- gnl|ti|818422814 name:POAA-aaa32p23.b1 (577 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_641352.1| hypothetical protein DDB0206491 [Dictyoste... 49 1e-004 ref|XP_849400.1| PREDICTED: similar to quiescin Q6-like 1 [... 38 0.17 emb|CAE70138.1| Hypothetical protein CBG16600 [Caenorhabdit... 38 0.23 ref|NP_850399.1| calmodulin binding [Arabidopsis thaliana] ... 36 0.66 gb|AAB64038.1| putative SF16 protein {Helianthus annuus} [A... 36 0.66 ref|NP_973681.1| calmodulin binding [Arabidopsis thaliana] 36 0.66 ref|NP_001028473.1| hypothetical protein LOC229474 [Mus mus... 36 0.66 ref|XP_215594.3| PREDICTED: similar to mKIAA1727 protein [R... 36 0.66 dbj|BAD86953.1| paramyosin-like [Oryza sativa (japonica cul... 36 0.87 gb|EAL41070.1| ENSANGP00000027224 [Anopheles gambiae str. P... 36 0.87 >ref|XP_641352.1| hypothetical protein DDB0206491 [Dictyostelium discoideum] gb|EAL67369.1| hypothetical protein DDB0206491 [Dictyostelium discoideum] Length = 198
Identities = 21/41 (51%), Positives = 32/41 (78%) Frame = +3
+L+ + ++ +IIQEE Y LDT+YFQ+IWE+P LE+L+ F Sbjct: 106 NLNQTCLVSFKIIQEEYYQLDTNYFQYIWELPLLEILLTTF 146 --------------------------------- gnl|ti|818420795 name:POAA-aaa33b14.b1 mate_pair:818418541 (483 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00512949.1| hypothetical protein ClimDRAFT_0912 [Chl... 50 4e-005 ref|YP_104499.1| hypothetical protein BMA2996 [Burkholderia... 50 4e-005 ref|ZP_00592337.1| hypothetical protein PaesDRAFT_0944 [Pro... 48 1e-004 ref|ZP_00592819.1| hypothetical protein PaesDRAFT_0446 [Pro... 46 4e-004 ref|ZP_00593174.1| hypothetical protein PaesDRAFT_0012 [Pro... 45 7e-004 ref|ZP_00531780.1| hypothetical protein Cphamn1DRAFT_2380 [... 42 0.006 ref|ZP_00591717.1| hypothetical protein PaesDRAFT_1569 [Pro... 42 0.008 ref|YP_034120.1| hypothetical protein BH14150 [Bartonella h... 41 0.017 ref|ZP_00592820.1| hypothetical protein PaesDRAFT_0447 [Pro... 39 0.049 ref|NP_297916.1| hypothetical protein XF0626 [Xylella fasti... 39 0.084 >ref|ZP_00512949.1| hypothetical protein ClimDRAFT_0912 [Chlorobium limicola DSM 245] gb|EAM42427.1| hypothetical protein ClimDRAFT_0912 [Chlorobium limicola DSM 245] Length = 193 Score = 49.7 bits (117), Expect = 4e-005 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = +2
S L +H SPLT+H SPLT H SPLT H SPLT+ Sbjct: 89 SPLTAHRSPLTAHRSPLTAHRSPLTAHRSPLTA 121 -------------------------- gnl|ti|818418560 name:POAA-aaa33f04.g1 mate_pair:818420811 (640 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_682866.1| PREDICTED: similar to Sacsin [Danio rerio] 54 5e-006 emb|CAG09278.1| unnamed protein product [Tetraodon nigrovir... 47 5e-004 ref|NP_197702.1| protein binding / ubiquitin-protein ligase... 45 0.001 emb|CAI13923.1| spastic ataxia of Charlevoix-Saguenay (sacs... 45 0.002 emb|CAE45964.1| hypothetical protein [Homo sapiens] 45 0.002 ref|NP_055178.2| sacsin [Homo sapiens] 45 0.002 ref|XP_586753.2| PREDICTED: similar to sacsin [Bos taurus] 45 0.002 ref|XP_534533.2| PREDICTED: similar to sacsin [Canis famili... 45 0.002 emb|CAG02848.1| unnamed protein product [Tetraodon nigrovir... 44 0.005 ref|XP_417138.1| PREDICTED: similar to sacsin [Gallus gallus] 43 0.009 >ref|XP_682866.1| PREDICTED: similar to Sacsin [Danio rerio] Length = 3397
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 2/130 (1%) Frame = +2
+D ++ GP + +FNN++FS+ DW R K+G++ K + Sbjct: 902 DDGMALCNGPCLWIFNNELFSEEDW------------------RNILKVGSASKENKVEM 943
IG KFGLG YH+SD+ S++SG ++LILD + +K + +K Sbjct: 944 IG-----------------KFGLGFNAVYHVSDIPSILSGKKLLILDPNVTHLEKHIGSK 986
G L +
Sbjct: 987 GDPGIKLDPF 996 --------------------------- gnl|ti|818418561 name:POAA-aaa33f06.g1 mate_pair:818420812 (740 letters) Score E
Sequences producing significant alignments: (bits) Value gb|EAA73127.1| hypothetical protein FG08272.1 [Gibberella z... 62 3e-008 ref|XP_325410.1| hypothetical protein [Neurospora crassa] >... 57 5e-007 ref|XP_364917.1| hypothetical protein MG09762.4 [Magnaporth... 49 2e-004 gb|AAB01767.1| unknown 37 0.66 ref|ZP_00665456.1| von Willebrand factor, type A [Syntropho... 36 1.5 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 2.5 gb|AAQ91617.1| unknown [Nosema locustae] 35 3.3 gb|AAF21242.1| beta-glucosidase precursor [Coccidioides imm... 35 3.3 gb|ABA97675.1| von Willebrand factor type A domain, putativ... 35 3.3 ref|XP_415293.1| PREDICTED: similar to oxysterol binding pr... 35 3.3 >gb|EAA73127.1| hypothetical protein FG08272.1 [Gibberella zeae PH-1] ref|XP_388448.1| hypothetical protein FG08272.1 [Gibberella zeae PH-1] Length = 774 Score = 61.6 bits (148), Expect = 3e-008 Identities = 28/47 (59%), Positives = 37/47 (78%) Frame = +1
+I+TFGFGYSL + L IA+ G G +AFIPDAG +GT FV+A++NL Sbjct: 232 SIHTFGFGYSLKSDLLKSIAEIGNGNYAFIPDAGMIGTVFVHAVANL 278 ----------------------------- gnl|ti|818418564 name:POAA-aaa33f12.g1 mate_pair:818420815 (291 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_328461.1| hypothetical protein [Neurospora crassa] >... 52 8e-006 gb|EAL91542.1| tyrosyl-tRNA synthetase [Aspergillus fumigat... 51 1e-005 ref|XP_783144.1| PREDICTED: similar to tyrosyl-tRNA synthet... 51 1e-005 ref|XP_787967.1| PREDICTED: similar to tyrosyl-tRNA synthet... 51 1e-005 ref|XP_365747.1| hypothetical protein MG02449.4 [Magnaporth... 50 2e-005 gb|AAQ97863.1| tyrosyl-tRNA synthetase [Danio rerio] >gi|41... 50 3e-005 gb|AAH76558.1| Tyrosyl-tRNA synthetase [Danio rerio] >gi|68... 50 3e-005 ref|XP_708169.1| PREDICTED: similar to Tyrosyl-tRNA synthet... 50 3e-005 emb|CAF99467.1| unnamed protein product [Tetraodon nigrovir... 50 3e-005 ref|XP_623127.1| PREDICTED: similar to GA18259-PA [Apis mel... 49 4e-005 >ref|XP_328461.1| hypothetical protein [Neurospora crassa] gb|EAA29312.1| hypothetical protein [Neurospora crassa] Length = 409 Score = 51.6 bits (122), Expect = 8e-006 Identities = 25/29 (86%), Positives = 26/29 (89%) Frame = -1
EHDAKKAGAEVVK SDN LSGLLYP+LQ Sbjct: 162 EHDAKKAGAEVVKQSDNAPLSGLLYPILQ 190 ------------------------------------------ gnl|ti|818420817 name:POAA-aaa33f18.b1 mate_pair:818418567 (920 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAO52538.1| similar to Homo sapiens (Human). Hypothetica... 49 2e-004 ref|XP_644109.1| hypothetical protein DDB0217536 [Dictyoste... 49 2e-004 pir||T31613 hypothetical protein Y50E8A.i - Caenorhabditis ... 47 0.001 gb|AAA31881.1| A 'c' was inserted after nt 369 (=nt 10459 i... 45 0.005 ref|XP_476232.1| putative ubiquitin-onjugating enzyme E2 [O... 44 0.008 ref|NP_649995.2| CG6303-PA [Drosophila melanogaster] >gi|45... 44 0.008 emb|CAA33190.1| unnamed protein product [Crithidia fascicul... 44 0.008 gb|EAL27337.1| GA19502-PA [Drosophila pseudoobscura] 44 0.008 gb|EAA08209.3| ENSANGP00000002826 [Anopheles gambiae str. P... 43 0.013 gb|EAN77139.1| hypothetical protein, conserved [Trypanosoma... 43 0.018 >gb|AAO52538.1| similar to Homo sapiens (Human). Hypothetical protein FLJ13786 (EC 6.3.2.19) (Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) [Dictyostelium discoideum] Length = 2208 Score = 48.9 bits (115), Expect = 2e-004 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = +3
VC SLLGTW+G+ N S+LLQ I SLIL+P PF N PG Sbjct: 2067 VCLSLLGTWAGSSGETWNPNTSTLLQVFISIQSLILVPEPFFNEPG 2112 ---------------------- gnl|ti|818420825 name:POAA-aaa33h12.b1 mate_pair:818418575 (887 letters) Score E
Sequences producing significant alignments: (bits) Value ref|NP_192450.1| nucleic acid binding / nucleotide binding ... 67 8e-010 gb|EAA76734.1| hypothetical protein FG06802.1 [Gibberella z... 61 6e-008 gb|AAH44361.1| LOC402808 protein [Danio rerio] 61 6e-008 ref|XP_692816.1| PREDICTED: hypothetical protein XP_687724 ... 61 6e-008 emb|CAG06962.1| unnamed protein product [Tetraodon nigrovir... 60 8e-008 ref|XP_414243.1| PREDICTED: similar to U3 small nucleolar R... 57 1e-006 gb|AAY21208.1| U3-55K-like protein 2 [Arabidopsis thaliana] 57 1e-006 ref|NP_663595.1| U3 snoRNP-associated protein [Mus musculus... 56 2e-006 emb|CAD78372.1| putative WD-repeat containing protein [Rhod... 56 2e-006 Yüklə 3,49 Mb. Dostları ilə paylaş:
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