Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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emb|CAD13621.1| PROBABLE ADENOSYLHOMOCYSTEINASE (S-ADENOSYL... 78 2e-013 >ref|YP_379846.1| S-adenosyl-L-homocysteine hydrolase [Chlorobium chlorochromatii CaD3]
gb|ABB28803.1| S-adenosyl-L-homocysteine hydrolase [Chlorobium chlorochromatii CaD3]
Length = 471 Score = 84.0 bits (206), Expect = 5e-015 Identities = 41/54 (75%), Positives = 46/54 (85%) Frame = +3
T + L YKVADI LAEWGRKEIE+AE+EMPGLMA+RKKYA +PLKGARIA S Sbjct: 3 TVAEALAYKVADISLAEWGRKEIEIAEKEMPGLMALRKKYAGQKPLKGARIAGS 56 ------------------- gnl|ti|818421607 name:POAA-aaa37d04.b1 mate_pair:818423294 (762 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAN11911.1| CG6404-PB, isoform B [Drosophila melanogaste... 84 5e-015 gb|EAL31156.1| GA19566-PA [Drosophila pseudoobscura] 84 5e-015 ref|NP_182170.1| unknown protein [Arabidopsis thaliana] >gi... 78 3e-013 gb|ABB47899.1| cytochrome oxidase assembly protein, putativ... 78 4e-013 ref|NP_922381.1| putative Oxa1 protein [Oryza sativa (japon... 78 4e-013 gb|AAX45884.1| hypothetical protein [Zygnema circumcarinatum] 78 4e-013 gb|EAA11925.2| ENSANGP00000014070 [Anopheles gambiae str. P... 75 2e-012 ref|XP_790253.1| PREDICTED: similar to Inner membrane prote... 72 2e-011 ref|XP_784750.1| PREDICTED: similar to Inner membrane prote... 72 2e-011 ref|XP_691423.1| PREDICTED: similar to Inner membrane prote... 71 4e-011 >gb|AAN11911.1| CG6404-PB, isoform B [Drosophila melanogaster] gb|AAF50127.2| CG6404-PA, isoform A [Drosophila melanogaster] gb|AAD38571.1| BcDNA.GH02220 [Drosophila melanogaster] ref|NP_648417.1| CG6404-PB, isoform B [Drosophila melanogaster] ref|NP_729634.1| CG6404-PA, isoform A [Drosophila melanogaster] Length = 441 Score = 84.0 bits (206), Expect = 5e-015 Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 3/106 (2%) Frame = +2
PQM + T AR A+ +++ F+ + GVNPLK+ + LAQAP+F+ F+ Sbjct: 186 PQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMG 245
L+ + ++ M GG WFT+LT+ DP+Y+L L+T+AT L++E+ Sbjct: 246 LRQMANAPVESMRDGGLFWFTDLTMADPFYLLPLITSATLYLTIEI 291 -------------- gnl|ti|818421616 name:POAA-aaa37d24.b1 mate_pair:818423304 (890 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_644770.1| hypothetical protein DDB0168106 [Dictyoste... 71 4e-011 ref|XP_797532.1| PREDICTED: similar to Mitotic spindle asse... 68 5e-010 gb|AAH68714.1| MGC81153 protein [Xenopus laevis] 67 1e-009 gb|AAH45227.1| Mad2l1-prov protein [Xenopus laevis] >gi|180... 67 1e-009 ref|XP_420629.1| PREDICTED: similar to Mitotic spindle asse... 64 5e-009 gb|AAW25990.1| SJCHGC08975 protein [Schistosoma japonicum] 64 9e-009 ref|NP_001017739.1| hypothetical protein LOC550434 [Danio r... 62 3e-008 gb|AAV38572.1| MAD2 mitotic arrest deficient-like 1 (yeast)... 62 3e-008 ref|XP_533278.2| PREDICTED: similar to Mitotic spindle asse... 62 3e-008 dbj|BAE35726.1| unnamed protein product [Mus musculus] 62 3e-008 >ref|XP_644770.1| hypothetical protein DDB0168106 [Dictyostelium discoideum] ref|XP_644480.1| hypothetical protein DDB0217277 [Dictyostelium discoideum] gb|AAO51442.1| similar to Homo sapiens (Human). MAD2-like protein 1 [Dictyostelium discoideum] gb|EAL70818.1| hypothetical protein DDB0168106 [Dictyostelium discoideum] gb|EAL70554.1| hypothetical protein DDB0217277 [Dictyostelium discoideum] Length = 203
Identities = 35/53 (66%), Positives = 41/53 (77%) Frame = +1
K E EI+ EIQ IIRQITASVTFLP++ +AC F+LLV T DL+VP EESD Sbjct: 118 KPEKEIMNEIQAIIRQITASVTFLPLLPNACTFDLLVYTSKDLAVPQKWEESD 170 Score = 43.9 bits (102), Expect = 0.007 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%) Frame = +3 Query: 270 KAEAEILKEIQGIIRQISA---FLPIIESACLFELLVRAPFQIAKKKK 404 K E EI+ EIQ IIRQI+A FLP++ +AC F+LLV +A +K Sbjct: 118 KPEKEIMNEIQAIIRQITASVTFLPLLPNACTFDLLVYTSKDLAVPQK 165 Score = 40.4 bits (93), Expect = 0.082 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 4/43 (9%) Frame = +3 Query: 72 RQPPKAEA*ILKEI----RQISASATFLPIIESACLFELLVQT 188 RQ P+ E I+ EI RQI+AS TFLP++ +AC F+LLV T Sbjct: 116 RQKPEKE--IMNEIQAIIRQITASVTFLPLLPNACTFDLLVYT 156 Score = 40.4 bits (93), Expect = 0.082 Identities = 20/33 (60%), Positives = 23/33 (69%) Frame = +1 Query: 463 KAEAEILKEIQGIIRQISASVTFLPIYRKRAPF 561 K E EI+ EIQ IIRQI+ASVTFLP+ F Sbjct: 118 KPEKEIMNEIQAIIRQITASVTFLPLLPNACTF 150 ----------------------------------------------- gnl|ti|818421620 name:POAA-aaa37f08.b1 mate_pair:818423308 (912 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL31950.1| CDH1-D [Gallus gallus] 86 1e-015 ref|XP_428325.1| PREDICTED: similar to Ac1147, partial [Gal... 63 2e-008 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 57 7e-007 ref|XP_520857.1| PREDICTED: hypothetical protein XP_520857 ... 57 7e-007 ref|XP_358030.2| PREDICTED: similar to Ac1147 [Mus musculus] 57 1e-006 dbj|BAB66226.1| 109aa long hypothetical protein [Sulfolobus... 49 2e-004 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 43 0.013 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 43 0.013 ref|XP_578905.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.066 ref|XP_578906.1| PREDICTED: similar to Ac1147 [Rattus norve... 39 0.19 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451 Score = 86.3 bits (212), Expect = 1e-015 Identities = 62/132 (46%), Positives = 71/132 (53%), Gaps = 1/132 (0%) Frame = -1
NDP+AGSPT TLLRLLLPL V + + V P L +PIGSSDGRCVQR Sbjct: 250 NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309
AGT+ST+ D LL IPR IIA P G PR +GT S C+ R Sbjct: 310 AGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSPRT 369
+Q G D PVI Sbjct: 370 SQ---GRDRPVI 378 core = 49.7 bits (117), Expect = 1e-004 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = -3 Query: 178 RNAGVSLVIGINQTNQSTN*ERPCTTTYIIE*SLS 74 ++A VS VIGINQTN+STN ERPCTTT+ IE LS Sbjct: 405 KHARVSFVIGINQTNRSTNKERPCTTTHGIEKELS 439 ----------------------------- gnl|ti|818423308 name:POAA-aaa37f08.g1 mate_pair:818421620 (911 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 62 4e-008 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 1e-004 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.25 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 37 1.2 ref|XP_710281.1| hypothetical protein CaO19.6835 [Candida a... 36 1.6 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 2.1 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 3.6 emb|CAG02278.1| unnamed protein product [Tetraodon nigrovir... 35 3.6 ref|XP_419908.1| PREDICTED: similar to Zgc:55573 [Gallus ga... 35 4.7 ref|ZP_00768960.1| MCP methyltransferase, CheR-type:TPR rep... 34 6.2 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102 Score = 61.6 bits (148), Expect = 4e-008 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -2
++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 Score = 34.3 bits (77), Expect = 6.2 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1 Query: 521 ACHVRSRKTTSYA*VGRSQEKSWWKVV 441 + VR+RK +YA GRSQ K WW+ V Sbjct: 43 SARVRTRKMVNYAWAGRSQRKLWWRSV 69 ----------------- gnl|ti|818421623 name:POAA-aaa37f16.b1 mate_pair:818423312 (874 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA77044.1| RedB protein [Physarum polycephalum] 84 5e-015 emb|CAA77043.1| RedB protein [Physarum polycephalum] 84 5e-015 gb|AAC37266.1| blackjack [Schistocerca americana] 33 9.9 >emb|CAA77044.1| RedB protein [Physarum polycephalum] Length = 79
Identities = 37/37 (100%), Positives = 37/37 (100%) Frame = -1
GDKLDLAKLKHGIYEWTSTKGPVPDLEILFPFFKRQW Sbjct: 43 GDKLDLAKLKHGIYEWTSTKGPVPDLEILFPFFKRQW 79 --------------------- gnl|ti|818421624 name:POAA-aaa37f20.b1 mate_pair:818423314 (872 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA77044.1| RedB protein [Physarum polycephalum] 86 2e-015 emb|CAA77043.1| RedB protein [Physarum polycephalum] 84 5e-015 gb|AAC37266.1| blackjack [Schistocerca americana] 33 9.8 >emb|CAA77044.1| RedB protein [Physarum polycephalum] Length = 79
Identities = 39/42 (92%), Positives = 39/42 (92%) Frame = -1
I S GDKLDLAKLKHGIYEWTSTKGPVPDLEILFPFFKRQW Sbjct: 38 IPSFGGDKLDLAKLKHGIYEWTSTKGPVPDLEILFPFFKRQW 79 ----------- gnl|ti|818421644 name:POAA-aaa37j18.b1 mate_pair:818423337 (897 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG31351.1| NADPH-dependent cytochrome P450 oxidoreducta... 62 4e-008 gb|AAG31350.1| NADPH-dependent cytochrome P450 oxidoreducta... 62 4e-008 gb|AAO24765.1| NADPH cytochrome P450 reductase [Anopheles g... 61 6e-008 gb|EAA06484.2| ENSANGP00000019316 [Anopheles gambiae str. P... 61 6e-008 dbj|BAB83588.1| Cytochrome P450 oxidoreductase [Coriolus ve... 60 1e-007 gb|AAW43037.1| electron transporter, putative [Cryptococcus... 59 2e-007 gb|EAL32925.1| GA11069-PA [Drosophila pseudoobscura] 59 3e-007 gb|AAN10585.1| CG11567-PB, isoform B [Drosophila melanogast... 58 4e-007 emb|CAA63639.1| NADPH--ferrihemoprotein reductase; NADPH-cy... 58 4e-007 gb|AAF52367.1| CG11567-PA, isoform A [Drosophila melanogast... 58 4e-007 >gb|AAG31351.1| NADPH-dependent cytochrome P450 oxidoreductase [Phanerochaete chrysosporium] Length = 690 Score = 61.6 bits (148), Expect = 4e-008 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 8/67 (11%) Frame = +2
VK+P+ + S FRLP +PK P+I+IGPG+GVAPF GFV +R ++T +K + Sbjct: 503 VKVPIHVRRSTFRLPTNPKSPVIMIGPGTGVAPFRGFVQERVAMARRTIEKHGPEGLADW 562
GP+ YY
Sbjct: 563 GPIRLYY 569 ------------ gnl|ti|818423340 name:POAA-aaa37j24.g1 mate_pair:818421647 (894 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAD29083.1| SCAR1 [Dictyostelium discoideum] 58 4e-007 ref|XP_638311.1| SCAR1 [Dictyostelium discoideum] >gi|60466... 58 4e-007 ref|XP_691220.1| PREDICTED: similar to WAS protein family, ... 52 3e-005 ref|XP_685432.1| PREDICTED: similar to WAS protein family, ... 50 1e-004 gb|AAH91579.1| Unknown (protein for MGC:97504) [Xenopus tro... 49 2e-004 ref|XP_509596.1| PREDICTED: WAS protein family, member 3 [P... 49 3e-004 ref|XP_612605.1| PREDICTED: similar to WAS protein family, ... 49 3e-004 ref|XP_870581.1| PREDICTED: similar to WAS protein family, ... 49 3e-004 ref|XP_417128.1| PREDICTED: similar to Wiskott-Aldrich synd... 49 3e-004 dbj|BAE20647.1| unnamed protein product [Mus musculus] 49 3e-004 >gb|AAD29083.1| SCAR1 [Dictyostelium discoideum] Length = 443
Identities = 27/59 (45%), Positives = 41/59 (69%) Frame = +3
+L+++ +G+ LK +++ EAPK + A +VADILARRIAWA +D+SDD +WD Sbjct: 386 LLSSIMQGMALKPAEERKVAEAPKKE-EALNVADILARRIAWAGDSDSSEDESDDSDWD 443 -------------- nl|ti|818421656 name:POAA-aaa37l20.b1 mate_pair:818423350 (599 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 266 3e-070 ------------------------- gnl|ti|818421660 name:POAA-aaa37n04.b1 mate_pair:818423353 (560 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 237 1e-061 --------------------- gnl|ti|818423370 name:POAA-aaa37p22.g1 mate_pair:818421677 (443 letters) Score E
Sequences producing significant alignments: (bits) Value dbj|BAD74160.1| coronin [Physarum polycephalum] 67 3e-010 emb|CAA43707.1| coronin [Dictyostelium discoideum] >gi|1169... 44 0.002 ref|XP_647343.1| coronin [Dictyostelium discoideum] >gi|604... 44 0.002 ref|XP_646333.1| hypothetical protein DDB0201875 [Dictyoste... 42 0.005 ref|XP_684233.1| PREDICTED: similar to glycine receptor bet... 42 0.009 gb|AAH96926.1| Unknown (protein for IMAGE:7170256) [Danio r... 42 0.009 ref|XP_415184.1| PREDICTED: similar to Coronin 1C (Coronin ... 41 0.012 emb|CAG32583.1| hypothetical protein [Gallus gallus] 41 0.012 emb|CAI52031.1| coronin, actin binding protein 6 [Mus muscu... 41 0.015 gb|AAS48630.1| unknown [Homo sapiens] 41 0.015 >dbj|BAD74160.1| coronin [Physarum polycephalum] Length = 449
Identities = 33/40 (82%), Positives = 35/40 (87%) Frame = -2
+FK STPQKG+AFLPKRSLNV E EISRALKLHTNKV I Sbjct: 305 EFKSSTPQKGLAFLPKRSLNVNECEISRALKLHTNKVEPI 344 ----------------- gnl|ti|820220536 name:POAA-aaa38c23.g1 mate_pair:818419388 (562 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_645319.1| hypothetical protein DDB0168827 [Dictyoste... 79 6e-014 ref|XP_638466.1| hypothetical protein DDB0186131 [Dictyoste... 76 7e-013 ref|XP_638924.1| hypothetical protein DDB0185586 [Dictyoste... 74 3e-012 ref|XP_504681.1| hypothetical protein [Yarrowia lipolytica]... 73 5e-012 ref|ZP_00857813.1| Ribose-phosphate pyrophosphokinase [Brad... 73 6e-012 ref|XP_722829.1| hypothetical protein CaO19_12081 [Candida ... 72 8e-012 ref|NP_103967.1| ribose-phosphate pyrophosphokinase [Mesorh... 72 8e-012 ref|ZP_00558136.1| Ribose-phosphate pyrophosphokinase [Desu... 72 1e-011 ref|YP_319106.1| ribose-phosphate pyrophosphokinase [Nitrob... 72 1e-011 ref|ZP_00056405.1| COG0462: Phosphoribosylpyrophosphate syn... 72 1e-011 >ref|XP_645319.1| hypothetical protein DDB0168827 [Dictyostelium discoideum] gb|AAS45397.1| similar to ribose-phosphate pyrophosphokinase [Schizosaccharomyces pombe] [Dictyostelium discoideum] gb|EAL71275.1| hypothetical protein DDB0168827 [Dictyostelium discoideum] Length = 329 Score = 79.3 bits (194), Expect = 6e-014 Identities = 37/52 (71%), Positives = 44/52 (84%) Frame = -2
+RAS ++ AV+PFFGYARQSKK KSR PIT KLVANM++ AG DRVIT+DL Sbjct: 81 KRASAHRITAVVPFFGYARQSKKDKSRAPITCKLVANMMEAAGIDRVITMDL 132 gnl|ti|820220548 name:POAA-aaa38g03.g1 mate_pair:818419398 (783 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00521680.1| conserved hypothetical protein [Solibact... 62 2e-008 ref|NP_196799.1| unknown protein [Arabidopsis thaliana] >gi... 56 2e-006 emb|CAB88260.1| putative protein [Arabidopsis thaliana] 52 3e-005 ref|NP_196800.2| unknown protein [Arabidopsis thaliana] >gi... 52 3e-005 dbj|BAD35554.1| hypothetical protein [Oryza sativa (japonic... 50 6e-005 ref|NP_822319.1| putative secreted protein [Streptomyces av... 50 1e-004 ref|XP_464457.1| unknown protein [Oryza sativa (japonica cu... 49 2e-004 ref|ZP_00520219.1| conserved hypothetical protein [Solibact... 47 0.001 pir||T31613 hypothetical protein Y50E8A.i - Caenorhabditis ... 45 0.003 ref|XP_800651.1| PREDICTED: hypothetical protein XP_795558 ... 39 0.25 >ref|ZP_00521680.1| conserved hypothetical protein [Solibacter usitatus Ellin6076] gb|EAM59404.1| conserved hypothetical protein [Solibacter usitatus Ellin6076] Length = 664 Score = 62.4 bits (150), Expect = 2e-008 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Frame = -2
E+RGHF +++ASA+ Y + GD K K Sbjct: 135 ELRGHFVGHFLSASAQLYASMGDKDAKAK------------------------------- 163
ADY+VA+LAKCQ+ LG +GYL+AFP +FDRL+A +PVW Sbjct: 164 -------------ADYIVAELAKCQQKLGPSGYLSAFPIEWFDRLDARKPVW 202 Score = 41.6 bits (96), Expect = 0.015 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = -2 Query: 156 SKKHKSRTPITAKLVANMLQTAGFDR 79 SKK KSR PIT KLVANM++ AG DR Sbjct: 101 SKKDKSRAPITCKLVANMMEAAGIDR 126 ------------------- gnl|ti|820220548 name:POAA-aaa38g03.g1 mate_pair:818419398 (783 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00521680.1| conserved hypothetical protein [Solibact... 62 2e-008 ref|NP_196799.1| unknown protein [Arabidopsis thaliana] >gi... 56 2e-006 emb|CAB88260.1| putative protein [Arabidopsis thaliana] 52 3e-005 ref|NP_196800.2| unknown protein [Arabidopsis thaliana] >gi... 52 3e-005 dbj|BAD35554.1| hypothetical protein [Oryza sativa (japonic... 50 6e-005 ref|NP_822319.1| putative secreted protein [Streptomyces av... 50 1e-004 ref|XP_464457.1| unknown protein [Oryza sativa (japonica cu... 49 2e-004 ref|ZP_00520219.1| conserved hypothetical protein [Solibact... 47 0.001 pir||T31613 hypothetical protein Y50E8A.i - Caenorhabditis ... 45 0.003 ref|XP_800651.1| PREDICTED: hypothetical protein XP_795558 ... 39 0.25 >ref|ZP_00521680.1| conserved hypothetical protein [Solibacter usitatus Ellin6076] gb|EAM59404.1| conserved hypothetical protein [Solibacter usitatus Ellin6076] Length = 664 Score = 62.4 bits (150), Expect = 2e-008 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Frame = -2
E+RGHF +++ASA+ Y + GD K K Sbjct: 135 ELRGHFVGHFLSASAQLYASMGDKDAKAK------------------------------- 163
ADY+VA+LAKCQ+ LG +GYL+AFP +FDRL+A +PVW Sbjct: 164 -------------ADYIVAELAKCQQKLGPSGYLSAFPIEWFDRLDARKPVW 202 ---------------- gnl|ti|818419411 name:POAA-aaa38i17.b1 mate_pair:820220562 (522 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG31351.1| NADPH-dependent cytochrome P450 oxidoreducta... 62 1e-008 gb|AAG31350.1| NADPH-dependent cytochrome P450 oxidoreducta... 62 1e-008 gb|AAO24765.1| NADPH cytochrome P450 reductase [Anopheles g... 61 2e-008 gb|EAA06484.2| ENSANGP00000019316 [Anopheles gambiae str. P... 61 2e-008 dbj|BAB83588.1| Cytochrome P450 oxidoreductase [Coriolus ve... 60 3e-008 gb|AAW43037.1| electron transporter, putative [Cryptococcus... 59 7e-008 gb|EAL32925.1| GA11069-PA [Drosophila pseudoobscura] 59 1e-007 gb|AAN10585.1| CG11567-PB, isoform B [Drosophila melanogast... 58 1e-007 emb|CAA63639.1| NADPH--ferrihemoprotein reductase; NADPH-cy... 58 1e-007 gb|AAF52367.1| CG11567-PA, isoform A [Drosophila melanogast... 58 1e-007 >gb|AAG31351.1| NADPH-dependent cytochrome P450 oxidoreductase [Phanerochaete chrysosporium] Length = 690 Score = 61.6 bits (148), Expect = 1e-008 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 8/67 (11%) Frame = +1
VK+P+ + S FRLP +PK P+I+IGPG+GVAPF GFV +R ++T +K + Sbjct: 503 VKVPIHVRRSTFRLPTNPKSPVIMIGPGTGVAPFRGFVQERVAMARRTIEKHGPEGLADW 562
GP+ YY
Sbjct: 563 GPIRLYY 569 ------------- gnl|ti|820220565 name:POAA-aaa38i23.g1 mate_pair:818419413 (889 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAD29083.1| SCAR1 [Dictyostelium discoideum] 58 4e-007 ref|XP_638311.1| SCAR1 [Dictyostelium discoideum] >gi|60466... 58 4e-007 ref|XP_691220.1| PREDICTED: similar to WAS protein family, ... 52 3e-005 ref|XP_685432.1| PREDICTED: similar to WAS protein family, ... 50 1e-004 gb|AAH91579.1| Unknown (protein for MGC:97504) [Xenopus tro... 49 2e-004 ref|XP_509596.1| PREDICTED: WAS protein family, member 3 [P... 49 3e-004 ref|XP_612605.1| PREDICTED: similar to WAS protein family, ... 49 3e-004 ref|XP_870581.1| PREDICTED: similar to WAS protein family, ... 49 3e-004 ref|XP_417128.1| PREDICTED: similar to Wiskott-Aldrich synd... 49 3e-004 dbj|BAE20647.1| unnamed protein product [Mus musculus] 49 3e-004 >gb|AAD29083.1| SCAR1 [Dictyostelium discoideum] Length = 443
Identities = 27/59 (45%), Positives = 41/59 (69%) Frame = +1
+L+++ +G+ LK +++ EAPK + A +VADILARRIAWA +D+SDD +WD Sbjct: 386 LLSSIMQGMALKPAEERKVAEAPKKE-EALNVADILARRIAWAGDSDSSEDESDDSDWD 443 ------------- gnl|ti|818423564 name:POAA-aaa39e18.g1 mate_pair:818422533 (346 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_636072.1| putative tyrosine kinase-like protein [Dic... 86 5e-016 ref|XP_636073.1| putative tyrosine kinase-like protein [Dic... 85 7e-016 ref|XP_649425.1| protein kinase, putative [Entamoeba histol... 60 3e-008 ref|XP_473853.1| OSJNBa0085I10.15 [Oryza sativa (japonica c... 58 1e-007 gb|AAM20478.1| putative protein kinase [Arabidopsis thaliana] 57 2e-007 Yüklə 3,49 Mb. Dostları ilə paylaş:
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