Webmaster's Note: As Gerard says below, his Fourth Report came in two parts

gb|AAP86286.1| CTR1-like kinase kinase kinase [Brassica jun... 57 2e-007

ref|NP_177507.1| ATP binding / ice binding / kinase/ protei... 57 2e-007

gb|AAL66190.1| putative serine/threonine-specific protein k... 56 3e-007

dbj|BAD38153.1| putative CTR1-like kinase kinase kinase [Or... 56 5e-007

ref|XP_640564.1| leucine-rich repeat-containing protein (LR... 55 6e-007

>ref|XP_636072.1| putative tyrosine kinase-like protein [Dictyostelium discoideum]

gb|EAL62607.1| putative tyrosine kinase-like (TKL) protein [Dictyostelium

discoideum]

Length = 642
Score = 85.5 bits (210), Expect = 5e-016

Identities = 34/60 (56%), Positives = 50/60 (83%)

Frame = +2
Query: 110 EGKQITIDEVRLGPRIGKGNFGEVYKAYWRGAEIAVKKLPAHNMTDQFLKDFHKEVSLMR 289

+GK I I ++++G RIGKGN+GEVY WRG+++AVKKLPAHN+ + LK+FH+E++LM+

Sbjct: 365 DGKDIDIHQIKIGVRIGKGNYGEVYLGTWRGSQVAVKKLPAHNINENILKEFHREINLMK 424

------------

PP11_Resultat

gnl|ti|818422548 name:POAA-aaa39i04.b1

mate_pair:818423579

(599 letters)

Score E

Sequences producing significant alignments: (bits) Value
gb|AAV31415.1| putative 26S protease regulatory subunit 6A ... 75 1e-012

gb|EAA06390.1| ENSANGP00000007334 [Anopheles gambiae str. P... 75 1e-012

gb|AAF56177.1| CG10370-PA [Drosophila melanogaster] >gi|567... 75 1e-012

gb|EAL27773.1| GA10280-PA [Drosophila pseudoobscura] 75 1e-012

ref|XP_392722.1| PREDICTED: similar to GA10280-PA [Apis mel... 75 1e-012

gb|AAD24194.1| Tat-binding protein-1 [Drosophila melanogaster] 73 5e-012

ref|XP_638617.1| hypothetical protein DDB0186002 [Dictyoste... 73 5e-012

ref|XP_745064.1| 26S protease subunit regulatory subunit 6a... 72 2e-011

ref|XP_782191.1| PREDICTED: similar to 26S protease regulat... 72 2e-011

ref|XP_799095.1| PREDICTED: similar to 26S protease regulat... 72 2e-011

>gb|AAV31415.1| putative 26S protease regulatory subunit 6A [Toxoptera citricida]

Length = 431

Score = 75.1 bits (183), Expect = 1e-012

Identities = 37/42 (88%), Positives = 40/42 (95%)

Frame = -3
Query: 141 IGTKRFDSELSGDREVQRTMLELLNQLDGFSSTSDIKVIEST 16

IGTKRFDSE +GDREVQRTMLELLNQLDGFSST+DIKVI +T

Sbjct: 284 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAAT 325

--------------

gnl|ti|818423582 name:POAA-aaa39i10.g1

mate_pair:818422551

(767 letters)

Score E

Sequences producing significant alignments: (bits) Value
ref|NP_000129.2| fibrillin 1 [Homo sapiens] 48 3e-004

emb|CAD21572.3| nidogen-2 [Mus musculus] 48 3e-004

ref|XP_861792.1| PREDICTED: similar to Fibrillin-1 precurso... 48 3e-004

ref|XP_861765.1| PREDICTED: similar to Fibrillin-1 precurso... 48 3e-004

ref|XP_861733.1| PREDICTED: similar to Fibrillin-1 precurso... 48 3e-004

dbj|BAE24492.1| unnamed protein product [Mus musculus] 48 3e-004

dbj|BAE37706.1| unnamed protein product [Mus musculus] 48 3e-004

emb|CAA98251.1| Hypothetical protein C50H2.3 [Caenorhabditi... 39 0.14

gb|AAA96507.1| MEC-9L >gi|1016708|gb|AAA96506.1| MEC-9L 39 0.14

emb|CAE72279.1| Hypothetical protein CBG19401 [Caenorhabdit... 39 0.24

>ref|NP_000129.2| fibrillin 1 [Homo sapiens]

Length = 2871

Score = 48.1 bits (113), Expect = 3e-004

Identities = 19/32 (59%), Positives = 23/32 (71%)

Frame = +1
Query: 388 CSQFAFCQNTLGPFSCYCMPGYTGAGFSCTIL 483

CSQ A C+NT+G + C C GYTG GF+CT L

Sbjct: 1374 CSQHADCKNTMGSYRCLCKEGYTGDGFTCTDL 1405

--------

gnl|ti|818422568 name:POAA-aaa39m04.b1

mate_pair:818423600

(895 letters)

Score E

Sequences producing significant alignments: (bits) Value
sp|P47808|MYSH_ACACA High molecular weight form of myosin I... 66 2e-009

pir||A23662 myosin I, high molecular weight - Acanthamoeba sp 66 2e-009

gb|AAW42595.1| nonmuscle myosin heavy chain b, putative [Cr... 53 2e-005

ref|XP_421901.1| PREDICTED: similar to MYO1B protein [Gallu... 53 2e-005

ref|XP_687345.1| PREDICTED: similar to myosin VIIa [Danio r... 52 2e-005

emb|CAG10098.1| unnamed protein product [Tetraodon nigrovir... 50 8e-005

gb|AAZ15112.1| myosin VIIa-like [Xenopus laevis] 49 2e-004

gb|EAA09202.3| ENSANGP00000003753 [Anopheles gambiae str. P... 49 3e-004

ref|NP_036355.2| myosin IB [Homo sapiens] 49 3e-004

emb|CAG02935.1| unnamed protein product [Tetraodon nigrovir... 40 0.14

>sp|P47808|MYSH_ACACA High molecular weight form of myosin I (HMWMI)

gb|AAA27709.1| myosin heavy chain

Length = 1577
Score = 65.9 bits (159), Expect = 2e-009

Identities = 27/38 (71%), Positives = 34/38 (89%)

Frame = +2
Query: 308 THVGTILISVNPFKPLPLYTPTIIDQYAHRGTKDLPPH 421

T++GTILISVNPFK LPLYTPT++DQY H+ K++PPH

Sbjct: 106 TNIGTILISVNPFKRLPLYTPTVMDQYMHKVPKEMPPH 143

Score = 35.8 bits (81), Expect = 2.1

Identities = 14/33 (42%), Positives = 24/33 (72%)

Frame = +1

Query: 49 LKEKFNYLTEMDEMNEPLVIRNLRERFKKNLIY 147

L + + L +MD++NE +++ NLR+RFK + IY

Sbjct: 73 LDKSVDDLVQMDDINEAMIVHNLRKRFKNDQIY 105

---------------------------

gnl|ti|818419987 name:POAA-aaa40b13.g1

mate_pair:818419663

(824 letters)

Score E

Sequences producing significant alignments: (bits) Value
ref|XP_448767.1| unnamed protein product [Candida glabrata]... 62 3e-008

gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae] >gi|11767... 61 5e-008

emb|CAA25036.1| unnamed protein product [Saccharomyces cere... 61 5e-008

pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase 61 5e-008

ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum] >gi|... 59 2e-007

pir||D38625 GTP-binding protein o-rab1 - electric ray (Disc... 58 3e-007

emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces... 56 1e-006

sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 >gi|806724|... 56 2e-006

sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 >gi|... 56 2e-006

dbj|BAE20616.1| unnamed protein product [Mus musculus] 55 2e-006

>ref|XP_448767.1| unnamed protein product [Candida glabrata]

emb|CAG61730.1| unnamed protein product [Candida glabrata CBS138]

Length = 206
Score = 61.6 bits (148), Expect = 3e-008

Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 2/59 (3%)

Frame = -2
Query: 238 RGSDGVMITYDITSQESLASVKQWIVDVETYA-PTAAKLIVGNKLDLI-PRVVELDVAE 68

RGS G++I YD+T QES VK W+ +++ YA T KL+VGNK DL RVVE DVA+

Sbjct: 79 RGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLADKRVVEYDVAK 137

----------

gnl|ti|818419688 name:POAA-aaa40f21.b1

mate_pair:818420013

(905 letters)

Score E

Sequences producing significant alignments: (bits) Value
dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum] >gi|199... 253 8e-066

dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum] >gi|199... 253 8e-066

dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum] >gi|199... 253 8e-066

gb|AAP80690.1| polyubiquitin [Griffithsia japonica] 250 4e-065

gb|AAP80689.1| polyubiquitin [Griffithsia japonica] 250 4e-065

gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis] 250 4e-065

gb|AAA75310.1| polyubiquitin >gi|1095488|prf||2109223A poly... 250 4e-065

gb|AAA72126.1| polyubiquitin >gi|445141|prf||1908440A poly-... 250 4e-065

ref|XP_863640.1| PREDICTED: similar to ubiquitin B precurso... 250 5e-065

dbj|BAA88168.1| ubiquitin [Microsporum canis] >gi|4589760|d... 248 2e-064

>dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]

dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]

Length = 305
Score = 253 bits (645), Expect = 8e-066

Identities = 140/174 (80%), Positives = 140/174 (80%)

Frame = +2
Query: 146 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 325

IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ

Sbjct: 3 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Query: 326 KESTLHLVLRLRGGMQVCFPSFQFRFFEFISLYYICAL*LKY*VKL*IFVKTLTGKTITL 505

KESTLHLVLRLRGGMQ IFVKTLTGKTITL

Sbjct: 63 KESTLHLVLRLRGGMQ-------------------------------IFVKTLTGKTITL 91
Query: 506 EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYYIQNESTLPL 667

EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQ ESTL L

Sbjct: 92 EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 145

Score = 253 bits (645), Expect = 8e-066

Identities = 140/174 (80%), Positives = 140/174 (80%)

Frame = +2

Query: 146 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 325

IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ

Sbjct: 79 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138
Query: 326 KESTLHLVLRLRGGMQVCFPSFQFRFFEFISLYYICAL*LKY*VKL*IFVKTLTGKTITL 505

KESTLHLVLRLRGGMQ IFVKTLTGKTITL

Sbjct: 139 KESTLHLVLRLRGGMQ-------------------------------IFVKTLTGKTITL 167
Query: 506 EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYYIQNESTLPL 667

EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQ ESTL L

Sbjct: 168 EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221

Score = 253 bits (645), Expect = 8e-066

Identities = 140/174 (80%), Positives = 140/174 (80%)

Frame = +2

Query: 146 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 325

IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ

Sbjct: 155 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
Query: 326 KESTLHLVLRLRGGMQVCFPSFQFRFFEFISLYYICAL*LKY*VKL*IFVKTLTGKTITL 505

KESTLHLVLRLRGGMQ IFVKTLTGKTITL

Sbjct: 215 KESTLHLVLRLRGGMQ-------------------------------IFVKTLTGKTITL 243
Query: 506 EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYYIQNESTLPL 667

EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQ ESTL L

Sbjct: 244 EVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Score = 145 bits (367), Expect = 1e-033

Identities = 74/74 (100%), Positives = 74/74 (100%)

Frame = +2

Query: 146 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 325

IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ

Sbjct: 231 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290
Query: 326 KESTLHLVLRLRGG 367

KESTLHLVLRLRGG

Sbjct: 291 KESTLHLVLRLRGG 304

-----------------------

gnl|ti|818420021 name:POAA-aaa40h17.g1

mate_pair:818419696

(215 letters)

Score E

Sequences producing significant alignments: (bits) Value
gb|AAL17663.1| UDP-GlcNAc:alpha-6-D-mannoside beta-1,2-N-ac... 49 5e-005

emb|CAC83074.1| alpha-1,6-mannosyl-glycoprotein beta-1,2-N-... 49 5e-005

emb|CAD21427.1| alpha-1,6-mannosyl-glycoprotein beta-1,2-N-... 49 5e-005

gb|AAX53005.1| CG7921-PB, isoform B [Drosophila melanogaste... 49 5e-005

gb|AAF56991.4| CG7921-PA, isoform A [Drosophila melanogaste... 49 5e-005

ref|XP_695371.1| PREDICTED: similar to Mannoside acetylgluc... 47 2e-004

emb|CAD43035.1| mannosyl glycoprotein transferase [Anophele... 47 3e-004

gb|EAA09196.3| ENSANGP00000003733 [Anopheles gambiae str. P... 47 3e-004

ref|XP_797642.1| PREDICTED: similar to CG7921-PB, isoform B... 46 3e-004

gb|AAH75542.1| Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-... 46 5e-004

>gb|AAL17663.1| UDP-GlcNAc:alpha-6-D-mannoside

beta-1,2-N-acetylglucosaminyltransferase II [Drosophila

melanogaster]

Length = 471

Score = 48.9 bits (115), Expect = 5e-005

Identities = 17/35 (48%), Positives = 23/35 (65%)

Frame = +2
Query: 83 TSWKNVGMIFSRERWIQLRGAGKEFCTFDDYNWDW 187

+S N+G F+R W +R + FCT+DDYNWDW

Sbjct: 334 SSKHNMGFAFNRTTWSNIRKCARHFCTYDDYNWDW 368

-------------

nl|ti|818419702 name:POAA-aaa40j07.b1

mate_pair:818420027

(716 letters)

Score E

Sequences producing significant alignments: (bits) Value
emb|CAG04168.1| unnamed protein product [Tetraodon nigrovir... 91 4e-017

gb|AAH55559.1| LOC402826 protein [Danio rerio] 86 9e-016

ref|NP_001007888.1| MGC89894 protein [Xenopus tropicalis] >... 85 3e-015

gb|AAH55025.1| 1300019J08Rik protein [Mus musculus] 84 4e-015

dbj|BAB23790.1| unnamed protein product [Mus musculus] >gi|... 84 4e-015

gb|AAH22626.1| 1300019J08Rik protein [Mus musculus] 84 4e-015

gb|AAH43681.1| RIKEN cDNA 1300019J08 gene [Mus musculus] 84 4e-015

ref|XP_581586.2| PREDICTED: similar to T12A2.1 [Bos taurus] 84 6e-015

ref|XP_532656.2| PREDICTED: similar to T12A2.1 [Canis famil... 84 6e-015

ref|XP_235065.3| PREDICTED: similar to hypothetical protein... 84 6e-015

>emb|CAG04168.1| unnamed protein product [Tetraodon nigroviridis]

Length = 357

Score = 90.9 bits (224), Expect = 4e-017

Identities = 38/46 (82%), Positives = 43/46 (93%)

Frame = +2
Query: 200 EKDLDGKGMCVLPGLVDGHTHPVWAGDRVHEFAMKLAGATYLDIHK 337

+K +D KGMCVLPGLVD HTHPVWAGDRVHEFAMKLAGATY+D+H+

Sbjct: 69 DKVIDAKGMCVLPGLVDAHTHPVWAGDRVHEFAMKLAGATYMDVHR 114

-----------------

gnl|ti|818420028 name:POAA-aaa40j09.g1

mate_pair:818419703

(717 letters)

Score E

Sequences producing significant alignments: (bits) Value
ref|XP_636368.1| alpha kinase [Dictyostelium discoideum] >g... 120 4e-026

gb|AAC31918.1| myosin heavy chain kinase C [Dictyostelium d... 97 5e-019

ref|XP_635600.1| alpha kinase [Dictyostelium discoideum] >g... 97 5e-019

ref|XP_629868.1| putative alpha kinase [Dictyostelium disco... 81 3e-014

emb|CAE73613.1| Hypothetical protein CBG21103 [Caenorhabdit... 76 9e-013

gb|AAX25940.2| SJCHGC09429 protein [Schistosoma japonicum] 75 3e-012

gb|AAH55361.1| Eef2k protein [Mus musculus] 71 4e-011

dbj|BAC38076.1| unnamed protein product [Mus musculus] 71 4e-011

dbj|BAC25990.1| unnamed protein product [Mus musculus] 71 4e-011

ref|XP_414920.1| PREDICTED: similar to Elongation factor 2 ... 70 9e-011

>ref|XP_636368.1| alpha kinase [Dictyostelium discoideum]

gb|AAB50136.1| myosin heavy chain kinase B [Dictyostelium discoideum]

sp|P90648|KMHB_DICDI Myosin heavy chain kinase B (MHCK B)

gb|EAL62865.1| myosin heavy chain kinase [Dictyostelium discoideum]

Length = 732
Score = 120 bits (301), Expect = 4e-026

Identities = 63/135 (46%), Positives = 75/135 (55%)

Frame = -3
Query: 715 MQMVARRWAAKYNDFNPPKRIDFLMCYVVELVDRTPEVATCGFEPYLFILFYFFYFIFLF 536

MQM+A++WA KYN F PPK+I+FL V+E VDRT CG EPY

Sbjct: 189 MQMIAKKWADKYNSFKPPKKIEFLQSCVLEFVDRTSSDLICGAEPY-------------- 234
Query: 535 YFFTKKEQRE*KAVRIILDVRTKVMLIA*RYVEGVYRKFNNNSGYVSHDERNTPQAFSHF 356

VEG YRK+NNNSG+VS+DERNTPQ+FSHF

Sbjct: 235 -------------------------------VEGQYRKYNNNSGFVSNDERNTPQSFSHF 263
Query: 355 TYEHSNKQILIVDIQ 311

TYEHSN Q+LI+DIQ

Sbjct: 264 TYEHSNHQLLIIDIQ 278

Score = 102 bits (255), Expect = 9e-021

Identities = 47/65 (72%), Positives = 54/65 (83%)

Frame = -1

Query: 264 MQGVGDSISSDQYTDPQIHTYDGAGFGQGNLGKRGFEKFLNSHKCNAICQYLGLNPINPK 85

+QGVGD YTDPQIHTYDG GFG GNLG++GFEKFL++HKCNAICQYL L INPK

Sbjct: 277 IQGVGD-----HYTDPQIHTYDGVGFGIGNLGQKGFEKFLDTHKCNAICQYLNLQSINPK 331
Query: 84 SEKNE 70

SEK++

Sbjct: 332 SEKSD 336

------------------

gnl|ti|818420044 name:POAA-aaa40l17.g1

mate_pair:818419717

(558 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|ZP_00672278.1| Glutathionylspermidine synthase [Trichod... 49 7e-005

ref|NP_931157.1| hypothetical protein plu3957 [Photorhabdus... 46 8e-004

ref|NP_768838.1| hypothetical protein bll2198 [Bradyrhizobi... 44 0.002

emb|CAG73247.1| putative glutathionylspermidine synthase [E... 42 0.009

gb|AAX87968.1| predicted glutathionylspermidine synthase [H... 42 0.011

ref|NP_439089.1| hypothetical protein HI0929 [Haemophilus i... 42 0.011

ref|ZP_00156793.2| COG0754: Glutathionylspermidine synthase... 42 0.011

emb|CAG21913.1| conserved hypothetical protein [Photobacter... 42 0.015

ref|YP_120384.1| hypothetical protein nfa41710 [Nocardia fa... 42 0.015

ref|ZP_00841083.1| conserved hypothetical protein [Rhodopse... 40 0.043

>ref|ZP_00672278.1| Glutathionylspermidine synthase [Trichodesmium erythraeum IMS101]

gb|EAO29249.1| Glutathionylspermidine synthase [Trichodesmium erythraeum IMS101]

Length = 375

Score = 49.3 bits (116), Expect = 7e-005

Identities = 20/50 (40%), Positives = 34/50 (68%)

Frame = +3
Query: 228 VHFSCVSAHEEDFRTINYMLDVALQAGIDGTSIFINDVGWNKEKSRFVDL 377

++FSC ED T+ Y+ D+A+QAG++ I+I+D+GW+++ F DL

Sbjct: 166 LYFSCERETLEDLGTVEYLRDLAIQAGLNTQHIYIDDIGWSEDLEIFCDL 215

Score = 40.0 bits (92), Expect = 0.043

Identities = 16/28 (57%), Positives = 19/28 (67%)

Frame = +2

Query: 437 ITHLFKLYPWEWLTREGFSHQLLHEKLR 520

I HLFKLYPWEW+ E F LL E ++

Sbjct: 220 IRHLFKLYPWEWMMGENFGKYLLLEPMK 247

--------------

gnl|ti|818420054 name:POAA-aaa40n13.g1

mate_pair:818419727

(580 letters)

Score E

Sequences producing significant alignments: (bits) Value

gb|EAN07727.1| Protein-tyrosine-phosphatase [Mesorhizobium ... 59 1e-007

ref|YP_004789.1| protein-tyrosine phosphatase [Thermus ther... 56 6e-007

ref|NP_190048.2| protein tyrosine phosphatase [Arabidopsis ... 55 1e-006

emb|CAB72464.1| protein-tyrosine-phosphatase-like protein [... 54 2e-006

ref|YP_292359.1| Low molecular weight phosphotyrosine prote... 53 5e-006

gb|AAN29039.1| phosphotyrosine protein phosphatase [Brucell... 51 2e-005

gb|AAL53044.1| LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN... 51 3e-005

ref|NP_841815.1| Low molecular weight phosphotyrosine prote... 50 3e-005

ref|ZP_00317073.1| COG0394: Protein-tyrosine-phosphatase [M... 49 8e-005

gb|AAO72543.1| protein tyrosine phosphatase-like protein [O... 49 1e-004

>gb|EAN07727.1| Protein-tyrosine-phosphatase [Mesorhizobium sp. BNC1]

ref|ZP_00611776.1| Protein-tyrosine-phosphatase [Mesorhizobium sp. BNC1]

Length = 185

Score = 58.5 bits (140), Expect = 1e-007

Identities = 24/51 (47%), Positives = 36/51 (70%)

Frame = +3
Query: 396 RDEPAKGTEPAPVSVLFVCTGNLSRSPLCQGIFEQKLKERNIRHLFDVDSA 548

+D + +EP +++LFVC GN+ RSPL +G+F L+ER + HLF +DSA

Sbjct: 7 KDNTSIMSEPPRIAILFVCLGNICRSPLAEGVFRTVLQERGLEHLFQIDSA 57

------------------

gnl|ti|818419728 name:POAA-aaa40n15.b1

mate_pair:818420055

(911 letters)

Score E

Sequences producing significant alignments: (bits) Value

emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 113 1e-023

------------

gnl|ti|818420904 name:POAA-aaa41f10.b1

mate_pair:818418651

(897 letters)

Score E

Sequences producing significant alignments: (bits) Value

dbj|BAE19786.1| dynein heavy chain 9 [Chlamydomonas reinhar... 52 3e-005

ref|XP_689746.1| PREDICTED: similar to axonemal dynein heav... 45 0.004

ref|NP_061720.1| axonemal dynein heavy chain 7 [Homo sapien... 42 0.029

dbj|BAA76788.2| KIAA0944 protein [Homo sapiens] 42 0.029

ref|XP_515999.1| PREDICTED: similar to axonemal dynein heav... 42 0.029

ref|XP_516507.1| PREDICTED: similar to KIAA1410 protein [Pa... 40 0.084

ref|XP_545574.2| PREDICTED: similar to axonemal dynein heav... 40 0.084

ref|XP_421904.1| PREDICTED: similar to axonemal dynein heav... 38 0.42

gb|AAF53626.1| CG5526-PA [Drosophila melanogaster] >gi|1764... 38 0.54

ref|XP_786177.1| PREDICTED: similar to axonemal dynein heav... 36 1.6

>dbj|BAE19786.1| dynein heavy chain 9 [Chlamydomonas reinhardtii]

Length = 4141
Score = 52.0 bits (123), Expect = 3e-005

Identities = 26/63 (41%), Positives = 38/63 (60%)

Frame = -1
Query: 789 TKNLQNFIIAAGGKGLAAHASNLDAQLNSLLSQIRGTLQPLRRATLEVLVISLVHARDIV 610

T+ + I G +GLAA+A +LN +++ +RG L L RAT LV+ VHARD+V

Sbjct: 1307 TREVTEAITTGGSRGLAAYADRCTLELNKIVNLVRGQLASLERATCGSLVVIDVHARDVV 1366
Query: 609 ALL 601

A +

Sbjct: 1367 AAM 1369

-------------------

gnl|ti|818418651 name:POAA-aaa41f10.g1

mate_pair:818420904

(914 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|XP_612278.2| PREDICTED: similar to dynein, axonemal, he... 56 2e-006

dbj|BAA92648.2| KIAA1410 protein [Homo sapiens] 56 2e-006

emb|CAF97583.1| unnamed protein product [Tetraodon nigrovir... 56 2e-006

ref|XP_516507.1| PREDICTED: similar to KIAA1410 protein [Pa... 56 2e-006

ref|NP_056327.3| dynein, axonemal, heavy polypeptide 1 [Hom... 56 2e-006

emb|CAJ05060.1| dynein heavy chain, putative [Leishmania ma... 55 3e-006

ref|XP_414287.1| PREDICTED: similar to KIAA1410 protein [Ga... 55 3e-006

ref|NP_001028827.1| dynein, axonemal, heavy polypeptide 1 [... 55 3e-006

ref|XP_533802.2| PREDICTED: similar to dynein, axonemal, he... 55 4e-006

ref|XP_794575.1| PREDICTED: similar to dynein, axonemal, he... 55 4e-006

>ref|XP_612278.2| PREDICTED: similar to dynein, axonemal, heavy polypeptide 1 [Bos

taurus]

Length = 3120

Score = 56.2 bits (134), Expect = 2e-006

Identities = 25/40 (62%), Positives = 33/40 (82%)

Frame = +2
Query: 452 LVEANKRFEVIHKGLNGYLETKRSAFPRFYFLSNEELLAV 571

L + NK +++ KGL+ YLETKRSAFPRFYFLS++ELL +

Sbjct: 285 LRDCNKLLDMVQKGLSEYLETKRSAFPRFYFLSDDELLEI 324

Score = 35.4 bits (80), Expect = 2.8

Identities = 15/48 (31%), Positives = 28/48 (58%)

Frame = +2

Query: 80 TKDIMRQMPVDSRRFAAVDSIWRSTMDQAIRQPNLKVLASKVHLMQNI 223

++DI RQ+PV+S+R+ ++ IWR M A + + S L+ ++

Sbjct: 238 SEDINRQLPVESKRYQTMERIWRKIMKNAYENREVINVCSDQRLLDSL 285

------------------

gnl|ti|818420912 name:POAA-aaa41h02.b1

mate_pair:818418659

(914 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|XP_646648.1| hypothetical protein DDB0201995 [Dictyoste... 77 8e-013

ref|XP_645980.1| hypothetical protein DDB0190274 [Dictyoste... 75 4e-012

ref|ZP_00526611.1| oxidoreductase [Solibacter usitatus Elli... 62 2e-008

ref|ZP_00110207.1| COG1028: Dehydrogenases with different s... 61 5e-008

gb|EAL79410.1| oxidoreductase [Anaeromyxobacter dehalogenan... 55 3e-006

ref|YP_002916.1| short-chain dehydrogenase [Leptospira inte... 55 4e-006

ref|NP_710747.1| probable short-chain dehydrogenase [Leptos... 55 4e-006

ref|YP_241696.1| oxidoreductase [Xanthomonas campestris pv.... 52 3e-005

ref|YP_362366.1| putative oxidoreductase [Xanthomonas campe... 51 5e-005

ref|YP_202685.1| oxidoreductase [Xanthomonas oryzae pv. ory... 51 5e-005

>ref|XP_646648.1| hypothetical protein DDB0201995 [Dictyostelium discoideum]

gb|EAL72733.1| hypothetical protein DDB0201995 [Dictyostelium discoideum]

Length = 989

Score = 77.0 bits (188), Expect = 8e-013

Identities = 34/68 (50%), Positives = 49/68 (72%)

Frame = +3
Query: 93 KLFPPGKVDEHNEPLDLRPSTTWDQKIDEISTVELLEVQIVNSTVPFMLISSFTPLLKVM 272

++FPPG+VDEH E LDLR T+W Q ++EIS VE+ EV +VNST+PFML+S + ++

Sbjct: 797 EIFPPGQVDEHGEQLDLREKTSWVQSVEEISVVEVAEVSLVNSTIPFMLVSQLSSMMGAN 856
Query: 273 SSFSHFIK 296