Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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gb|AAB65764.1| endonuclease [Physarum polycephalum] 40 0.14 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 38 0.41 >ref|XP_578859.1| PREDICTED: similar to hypothetical protein [Rattus norvegicus] Length = 135
Identities = 33/45 (73%), Positives = 36/45 (80%) Frame = +3
+P DDEAFGYLKRVIVTPAVYP + F HF+IQSTGQKS V T Sbjct: 69 VPGADDEAFGYLKRVIVTPAVYPRFIEFLHFDIQSTGQKSHRVNT 113 ---------- gnl|ti|818418958 name:POAA-aaa44n05.g1 mate_pair:820220109 (367 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA76360.1| aconitate hydratase [Piromyces sp. E2] 104 1e-021 ref|XP_641958.1| aconitase [Dictyostelium discoideum] >gi|6... 97 1e-019 emb|CAB93521.1| mitochondrial aconitase [Drosophila melanog... 97 2e-019 gb|AAF54588.2| CG4706-PA [Drosophila melanogaster] >gi|1952... 96 4e-019 gb|EAL34563.1| GA21639-PA [Drosophila pseudoobscura] 93 3e-018 gb|AAH68910.1| LOC398139 protein [Xenopus laevis] 92 4e-018 dbj|BAC65324.1| hypothetical protein [Antheraea yamamai] 92 6e-018 gb|AAH74399.1| MGC84375 protein [Xenopus laevis] 92 6e-018 gb|AAH58049.1| Aconitase 2, mitochondrial [Danio rerio] >gi... 92 7e-018 emb|CAB72317.1| aconitase [Daphnia pulex] 91 9e-018 >emb|CAA76360.1| aconitate hydratase [Piromyces sp. E2] Length = 755
Identities = 51/74 (68%), Positives = 61/74 (82%), Gaps = 1/74 (1%) Frame = +3
GG+ IVKSFARIHETNLKKQG+LPLTFADP DYD I+P IS++GLK LTPG P+TAK Sbjct: 655 GGVAVIVKSFARIHETNLKKQGVLPLTFADPADYDKINPADKISILGLKTLTPGVPLTAK 714
++ + T+EIKLN Sbjct: 715 FTKADGSTYEIKLN 728 --------------- gnl|ti|820218559 name:POAA-aaa45b06.g1 (555 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_636266.1| hypothetical protein DDB0188369 [Dictyoste... 82 1e-014 gb|AAH45039.1| Drbp1-pending-prov protein [Xenopus laevis] 47 5e-004 gb|AAI05263.1| LOC535331 protein [Bos taurus] 46 6e-004 ref|XP_615387.2| PREDICTED: similar to Developmentally regu... 46 6e-004 emb|CAG31865.1| hypothetical protein [Gallus gallus] >gi|71... 45 0.001 emb|CAG00334.1| unnamed protein product [Tetraodon nigrovir... 45 0.001 emb|CAH90147.1| hypothetical protein [Pongo pygmaeus] >gi|4... 45 0.001 dbj|BAE24499.1| unnamed protein product [Mus musculus] 45 0.001 ref|XP_785181.1| PREDICTED: similar to developmentally regu... 44 0.004 ref|XP_696948.1| PREDICTED: similar to developmentally regu... 38 0.16 >ref|XP_636266.1| hypothetical protein DDB0188369 [Dictyostelium discoideum] gb|EAL62755.1| hypothetical protein DDB0188369 [Dictyostelium discoideum] Length = 1528 Score = 82.0 bits (201), Expect = 1e-014 Identities = 40/70 (57%), Positives = 52/70 (74%) Frame = -1
R+ LF C S ++QE L RLFSR+PGMEYCDLKK+K TG++KGFAY+NYS+PQAA Sbjct: 1257 RQRLFVVCHKS-----ISQENLYRLFSRYPGMEYCDLKKDKNTGKSKGFAYVNYSSPQAA 1311
L+ + L +
Sbjct: 1312 LLAKNDLNGI 1321 Score = 40.4 bits (93), Expect = 0.032 Identities = 16/27 (59%), Positives = 23/27 (85%) Frame = -3
AK+ ++G +YPT + LKV+FAEPLG+K Sbjct: 1314 AKNDLNGIKYPTSHTLKVVFAEPLGIK 1340 Score = 37.0 bits (84), Expect = 0.36 Identities = 15/51 (29%), Positives = 29/51 (56%) Frame = -1 Query: 396 VTQEQLARLFSRFPGMEYCDLKKNKQTGEAKGFAYINYSTPQAALMVLSPL 244 +T++ L F + +E C + +K T E+KG+AYI Y+ +A + + + Sbjct: 777 ITEKNLEDCFKVYGSIESCRIVIDKDTNESKGYAYIKYTKTSSAALAIEEM 827 --------- gnl|ti|820218610 name:POAA-aaa45n06.g1 mate_pair:820221080 (554 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA76360.1| aconitate hydratase [Piromyces sp. E2] 106 4e-022 ref|XP_641958.1| aconitase [Dictyostelium discoideum] >gi|6... 100 4e-020 emb|CAB93521.1| mitochondrial aconitase [Drosophila melanog... 99 8e-020 gb|AAF54588.2| CG4706-PA [Drosophila melanogaster] >gi|1952... 98 1e-019 gb|EAL34563.1| GA21639-PA [Drosophila pseudoobscura] 95 1e-018 gb|AAH68910.1| LOC398139 protein [Xenopus laevis] 95 1e-018 dbj|BAC65324.1| hypothetical protein [Antheraea yamamai] 94 2e-018 gb|AAH74399.1| MGC84375 protein [Xenopus laevis] 94 2e-018 gb|AAH58049.1| Aconitase 2, mitochondrial [Danio rerio] >gi... 94 2e-018 emb|CAB72317.1| aconitase [Daphnia pulex] 94 3e-018 >emb|CAA76360.1| aconitate hydratase [Piromyces sp. E2] Length = 755
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 1/87 (1%) Frame = +1
+S +H GG+ +IVKSFARIHETNLKKQG+LPLTFADP DYD I+P IS++G Sbjct: 642 SSREHAALEPRHLGGVAVIVKSFARIHETNLKKQGVLPLTFADPADYDKINPADKISILG 701
LK LTPG P+TAK ++ + T+EIKLN Sbjct: 702 LKTLTPGVPLTAKFTKADGSTYEIKLN 728 -------------- PP13_Resultat gnl|ti|820218622 name:POAA-aaa45p08.g1 mate_pair:820221088 (910 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAD25660.1| MRK1-LIKE SER/THR PROTEIN KINASE [Encephali... 61 8e-008 gb|AAM69001.1| protein kinase, putative [Leishmania major] ... 55 6e-006 emb|CAG86463.1| unnamed protein product [Debaryomyces hanse... 54 1e-005 emb|CAJ09187.1| protein kinase, putative; serine/threonine ... 53 3e-005 ref|XP_453478.1| unnamed protein product [Kluyveromyces lac... 52 4e-005 ref|XP_808935.1| protein kinase [Trypanosoma cruzi] >gi|708... 52 4e-005 ref|NP_473049.2| Ser/Thr protein kinase, putative [Plasmodi... 52 5e-005 emb|CAJ07144.1| protein kinase, putative [Leishmania major] 52 5e-005 ref|NP_172728.1| ATP binding / kinase/ protein kinase/ prot... 52 5e-005 emb|CAD12771.1| putative protein kinase [Plasmodium falcipa... 52 5e-005 >emb|CAD25660.1| MRK1-LIKE SER/THR PROTEIN KINASE [Encephalitozoon cuniculi GB-M1] ref|NP_586056.1| MRK1-LIKE SER/THR PROTEIN KINASE [Encephalitozoon cuniculi GB-M1] Length = 334
Identities = 20/50 (40%), Positives = 38/50 (76%) Frame = +3
+ ++ + +V+ ++ +RYL+++N+CH D+KPSNILID+ G + + DLG+ Sbjct: 147 VETEEIRSVYRQILEGLRYLHEKNICHRDMKPSNILIDTNGLVKICDLGS 196 ----------------- gnl|ti|820221092 name:POAA-aaa45p16.b1 mate_pair:820218626 (902 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_115306.1| putative resolvase [Staphylococcus aureus ... 62 4e-008 emb|CAC41996.1| resolvase [Exiguobacterium sp.] 59 3e-007 dbj|BAA82059.1| TnpR [Bacillus megaterium] 59 3e-007 emb|CAC41961.1| resolvase [Bacillus cereus] 59 4e-007 dbj|BAB62427.1| resolvase [Bacillus cereus] >gi|6691676|dbj... 59 4e-007 ref|NP_840347.1| Site-specific recombinase [Nitrosomonas eu... 56 3e-006 gb|AAK33618.1| putative integrase; bacteriophage 370.1 [Str... 54 1e-005 gb|AAL97387.1| putative integrase; bacteriophage 370.1 [Str... 54 1e-005 ref|YP_240852.1| ORF008 [Bacteriophage X2] >gi|62636902|gb|... 47 0.002 ref|YP_239679.1| ORF008 [Bacteriophage 53] >gi|66394877|ref... 46 0.003 >ref|NP_115306.1| putative resolvase [Staphylococcus aureus subsp. aureus Mu50] gb|AAC61934.1| putative resolvase Res [Staphylococcus aureus] gb|AAQ17173.1| resolvase [Staphylococcus aureus] dbj|BAB47525.1| putative resolvase [Staphylococcus aureus subsp. aureus Mu50] ref|NP_878029.1| resolvase [Staphylococcus aureus] ref|NP_863605.1| putative resolvase Res [Staphylococcus aureus] Length = 185
Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = -3
+ +L R+T I + Q L+NNN +L I+DM+I+T MG F M+S +E+E L+S+R Sbjct: 64 LDRLGRTTKQLIDLAQWLENNNIELQIIDMNINTKDPMGKMFFTMMSAFAELEANLLSER 123
TK ++ + G + Sbjct: 124 TKKGLESARARGNM 137 ------------- gnl|ti|820218627 name:POAA-aaa45p18.g1 mate_pair:820221093 (907 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAB79271.1| putative protein [Arabidopsis thaliana] >gi... 56 3e-006 ref|NP_194047.2| kinase [Arabidopsis thaliana] 56 3e-006 gb|AAP51797.1| retrotransposon protein, putative, Ty1-copia... 53 3e-005 ref|NP_916659.1| putative copia-type polyprotein [Oryza sat... 52 4e-005 ref|XP_470160.1| putative polyprotein [Oryza sativa (japoni... 51 8e-005 gb|ABA99612.1| retrotransposon protein, putative, unclassif... 51 8e-005 gb|AAD25830.1| putative retroelement pol polyprotein [Arabi... 50 2e-004 gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia... 48 5e-004 gb|AAP52462.1| retrotransposon protein, putative, Ty1-copia... 47 0.001 gb|AAD12998.1| pol polyprotein [Zea mays] 45 0.007 >emb|CAB79271.1| putative protein [Arabidopsis thaliana] emb|CAA18463.1| putative protein [Arabidopsis thaliana] Length = 1240
Identities = 25/50 (50%), Positives = 34/50 (68%) Frame = -1
H +I LPP++K I KW+YKIK N I +YK LVAKG+T ++G+D Sbjct: 113 HTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGID 162 ------------ gnl|ti|820221818 name:POAA-aaa46e03.b1 mate_pair:820221735 (894 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00416820.1| AMP-dependent synthetase and ligase [Azo... 58 8e-007 gb|AAC16126.1| acetyl-coenzyme a synthetase [Rhodobacter ca... 57 1e-006 ref|YP_350021.1| Acetate--CoA ligase [Pseudomonas fluoresce... 55 4e-006 ref|YP_261606.1| acetate--CoA ligase [Pseudomonas fluoresce... 55 4e-006 gb|AAG08119.1| acetyl-coenzyme A synthetase [Pseudomonas ae... 55 6e-006 ref|ZP_00474264.1| AMP-dependent synthetase and ligase [Chr... 54 1e-005 ref|ZP_00138484.2| COG0365: Acyl-coenzyme A synthetases/AMP... 53 3e-005 ref|ZP_00141174.1| COG0365: Acyl-coenzyme A synthetases/AMP... 52 3e-005 ref|XP_445089.1| unnamed protein product [Candida glabrata]... 51 8e-005 ref|NP_746598.1| acetyl-coA synthetase [Pseudomonas putida ... 51 8e-005 >ref|ZP_00416820.1| AMP-dependent synthetase and ligase [Azotobacter vinelandii AvOP] gb|EAM06460.1| AMP-dependent synthetase and ligase [Azotobacter vinelandii AvOP] Length = 653
Identities = 29/89 (32%), Positives = 39/89 (43%) Frame = -3
+Y+ S+ NPD FW EQA+ LDW +P +KV Sbjct: 27 MYQQSVINPDGFWREQARRLDWIKPFTKVKQ----------------------------- 57
F+ + KWF DG LNASYNC++ Sbjct: 58 ---TSFDDHHVDIKWFADGTLNASYNCLD 83 --------------- gnl|ti|820221737 name:POAA-aaa46e11.g1 mate_pair:820221820 (559 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX30301.1| unknown [Schistosoma japonicum] 87 5e-016 ref|XP_453849.1| unnamed protein product [Kluyveromyces lac... 86 1e-015 gb|AAX27748.1| unknown [Schistosoma japonicum] 74 6e-012 dbj|BAD26579.1| cytochrome P450 like_TBP [Citrullus lanatus] 67 6e-010 emb|CAB51041.1| putative transcription factor [Periplaneta ... 64 6e-009 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 56 2e-006 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 54 5e-006 dbj|BAD18905.1| rRNA intron-encoded endonuclease [Thermopro... 51 4e-005 dbj|BAB33421.1| putative senescence-associated protein [Pis... 49 2e-004 dbj|BAD18906.1| rRNA intron-encoded endonuclease [Thermopro... 48 2e-004 >gb|AAX30301.1| unknown [Schistosoma japonicum] Length = 55 Score = 87.2 bits (198), Expect = 5e-016 Identities = 36/43 (83%), Positives = 39/43 (90%) Frame = +3
+ + HEW+NEIPTVPTYYLAKPQPRERAW N RGKKTLLSLTL Sbjct: 6 ISDAHEWMNEIPTVPTYYLAKPQPRERAWRNQRGKKTLLSLTL 48 ----------------- gnl|ti|820221770 name:POAA-aaa46k11.g1 mate_pair:820221853 (562 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAF61732.1| catalase 2 [Helianthus annuus] 79 2e-013 emb|CAA39998.1| subunit 2 of cotton catalase [Gossypium hir... 77 8e-013 sp|P32290|CATA_PHAAU Catalase >gi|218322|dbj|BAA02755.1| ca... 76 1e-012 emb|CAD42908.1| catalase [Prunus persica] 76 1e-012 gb|AAG43363.1| catalase [Hevea brasiliensis] 76 1e-012 gb|AAO17721.1| catalase [Hypericum perforatum] 76 1e-012 gb|AAF19965.1| catalase 1 [Zantedeschia aethiopica] 75 2e-012 gb|AAM97542.1| catalase 3 [Capsicum annuum] 75 2e-012 emb|CAB16749.1| catalase [Soldanella alpina] >gi|17865454|s... 75 2e-012 sp|P45739|CATA_HELAN Catalase >gi|453529|gb|AAA69866.1| cat... 75 2e-012 >gb|AAF61732.1| catalase 2 [Helianthus annuus] Length = 492 Score = 78.8 bits (178), Expect = 2e-013 Identities = 34/49 (69%), Positives = 38/49 (77%) Frame = +1
P + FWTTNYGAPV +ND+SLTVG RGP LLEDY +EKLANFDR Sbjct: 8 PSSAYNAPFWTTNYGAPVYNNDSSLTVGTRGPILLEDYHFVEKLANFDR 56 ------------------- gnl|ti|820221854 name:POAA-aaa46k15.b1 (639 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_782521.1| PREDICTED: similar to Fibrillin-2 precurso... 51 4e-005 ref|NP_619614.1| stabilin-2 [Mus musculus] >gi|19705589|gb|... 48 4e-004 emb|CAI20599.1| novel protein similar to vertebrate thrombo... 48 4e-004 gb|AAG13634.1| hyaluronan receptor for endocytosis HARE pre... 48 4e-004 ref|XP_690395.1| PREDICTED: similar to thrombospondin 1 pre... 48 4e-004 ref|XP_238531.3| PREDICTED: similar to Stabilin 2 precursor... 48 4e-004 emb|CAG10667.1| unnamed protein product [Tetraodon nigrovir... 47 0.001 ref|XP_581841.2| PREDICTED: similar to Stabilin-1 precursor... 47 0.001 ref|XP_541851.2| PREDICTED: similar to Stabilin-1 precursor... 46 0.001 ref|XP_600125.2| PREDICTED: similar to Nidogen-2 precursor ... 46 0.002 >ref|XP_782521.1| PREDICTED: similar to Fibrillin-2 precursor [Strongylocentrotus purpuratus] Length = 3793
Identities = 22/39 (56%), Positives = 25/39 (64%) Frame = -2
D CS ICS +NCT GS +C C GYTGDG+ CTG Sbjct: 2658 DECSANICSMDSNCTN-SIGSFNCVCNMGYTGDGITCTG 2695 Score = 41.3 bits (89), Expect = 0.042 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -2 Query: 452 CSPQANCTLFPNGSHSCECWTGYTGDGVNC 363 C A+C P GS +C C +GYTGDG+ C Sbjct: 957 CDSLASCFNMPLGSFTCICDSGYTGDGITC 986 Score = 39.2 bits (84), Expect = 0.18 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = -2 Query: 473 DNCSLG--ICSPQANCTLFPNGSHSCECWTGYTGDGVNCTGL 354 D C G C+ A CT P GS+ C C+ G++GDG CT + Sbjct: 2078 DECMSGPDFCASTATCTNSP-GSYICTCFDGFSGDGFACTDI 2118 Score = 37.5 bits (80), Expect = 0.59 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = -2 Query: 452 CSPQANCTLFPNGSHSCECWTGYTGDGVNC 363 CS +A C P GS C C TGYTGDG C Sbjct: 2004 CSLEAACQNVP-GSFMCSCDTGYTGDGNTC 2032 Score = 37.5 bits (80), Expect = 0.59 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -2 Query: 455 ICSPQANCTLFPNGSHSCECWTGYTGDGVNCTGL 354 IC QA CT +GS++C C GY G+G +C+ + Sbjct: 2332 ICHLQATCTN-TDGSYNCSCNAGYEGNGTSCSNI 2364 Score = 36.7 bits (78), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 452 CSPQANCTLFPNGSHSCECWTGYTGDGVNCTGL 354 CSP A C P G+ +C C GY+G+G+ C + Sbjct: 2212 CSPDAVCNDLP-GTFTCICNAGYSGNGITCANM 2243 Score = 35.0 bits (74), Expect = 3.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -2 Query: 473 DNCSLGICSPQANCTLFPNGSHSCECWTGYTGDGVNC 363 D C C NCT P GS +C C G++G+G C Sbjct: 2244 DECIGMPCDVNGNCTNTP-GSFTCTCLAGFSGNGFTC 2279 Score = 33.7 bits (71), Expect = 8.1 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -2 Query: 500 YNLRFLTVPDNCSLGICSPQANCTLFPNGSHSCECWTGYTGDGVNC 363 Y F +P +C C + C + NG SC C GY +GV C Sbjct: 3514 YTGTFCEIPVSCEELDCQNNSTCEVDSNGVASCTCLDGY--EGVRC 3557 ----------------- gnl|ti|820221787 name:POAA-aaa46m23.g1 mate_pair:820221867 (886 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||A57036 talin - slime mold (Dictyostelium discoideum) 122 2e-026 ref|XP_635646.1| filopodin [Dictyostelium discoideum] >gi|6... 122 2e-026 gb|AAC46586.2| filopodin [Dictyostelium discoideum] >gi|182... 122 2e-026 gb|EAA04618.2| ENSANGP00000019107 [Anopheles gambiae str. P... 98 5e-019 gb|AAV41376.1| talin 1 [Danio rerio] >gi|57222259|ref|NP_00... 97 1e-018 gb|AAH77078.1| Tln1 protein [Danio rerio] 97 1e-018 ref|XP_693872.1| PREDICTED: similar to talin 1 [Danio rerio] 97 1e-018 gb|AAH92742.1| Tln1 protein [Danio rerio] 97 1e-018 ref|XP_637174.1| hypothetical protein DDB0191526 [Dictyoste... 93 2e-017 dbj|BAA75511.1| talin homologue [Dictyostelium discoideum] 93 2e-017 >pir||A57036 talin - slime mold (Dictyostelium discoideum) Length = 2491 Score = 122 bits (282), Expect = 2e-026 Identities = 48/82 (58%), Positives = 64/82 (78%) Frame = -2
WL + IL E G+++ D+ VL KKFFFNDANIDRNDPVQLHLL++QCRD ++E KYPT + Sbjct: 134 WLNNTQILSEQGISENDITVLMKKFFFNDANIDRNDPVQLHLLFVQCRDGIIEGKYPTQR 193
+E+ L+A+QCQV GD+ + Sbjct: 194 EESLALSALQCQVQLGDYNPTK 215
Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = -3
L+DES V E V+ I +++GIKNPEE+SL AG W Sbjct: 99 LVDESQNVSEIVNSICKKMGIKNPEEYSLM-NSAGAW 134 Score = 38.4 bits (82), Expect = 0.52 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -1 Query: 781 AKWLVPEKTCSFMTFNQYTSPC*FFFCCCCMLTTLQDTLLEYRKKHKARKVKMLDETTKT 602 A+WL EKT F N D L+Y+KKH+ +K K+LD T KT Sbjct: 57 ARWLAMEKTLQFYDINS-------------------DQQLDYKKKHRPQKFKLLDGTIKT 97 --------------- gnl|ti|820221798 name:POAA-aaa46o23.g1 mate_pair:820221877 (899 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_641372.1| NAD+ dependent glutamate dehydrogenase [Di... 67 9e-010 emb|CAC27837.2| NAD+ dependent glutamate dehydrogenase [Gib... 43 0.016 ref|XP_762131.1| hypothetical protein UM05984.1 [Ustilago m... 39 0.30 ref|XP_359530.1| hypothetical protein MG05247.4 [Magnaporth... 39 0.40 gb|AAB28355.1| NAD(+)-specific glutamate dehydrogenase; NAD... 39 0.40 sp|P00365|DHE2_NEUCR NAD-specific glutamate dehydrogenase (... 39 0.40 emb|CAE64675.1| Hypothetical protein CBG09451 [Caenorhabdit... 38 0.53 gb|EAA72319.1| hypothetical protein FG04117.1 [Gibberella z... 38 0.71 ref|XP_446609.1| unnamed protein product [Candida glabrata]... 38 0.96 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 37 1.3 >ref|XP_641372.1| NAD+ dependent glutamate dehydrogenase [Dictyostelium discoideum] gb|EAL67386.1| NAD+ dependent glutamate dehydrogenase [Dictyostelium discoideum] Length = 1036
Identities = 28/54 (51%), Positives = 39/54 (72%) Frame = -2
Y Q VK++L + LI SR++PEVDWFY KLG+ +YFDSTP VIA++++ Sbjct: 38 YKEQAVEVKSLLKSERLIESSRVEPEVDWFYCKLGLDSNYFDSTPSIVIARHIL 91 ------------ gnl|ti|818422668 name:POAA-aaa47a12.b1 mate_pair:818422181 (328 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA71932.1| hypothetical protein FG08133.1 [Gibberella z... 113 2e-024 ref|XP_325463.1| hypothetical protein [Neurospora crassa] >... 107 2e-022 gb|EAL39714.1| ENSANGP00000026022 [Anopheles gambiae str. P... 106 3e-022 gb|EAA12914.2| ENSANGP00000007283 [Anopheles gambiae str. P... 106 3e-022 ref|XP_640629.1| hypothetical protein DDB0214908 [Dictyoste... 106 3e-022 ref|XP_697885.1| PREDICTED: similar to FKBP12-rapamycin com... 105 6e-022 ref|XP_693307.1| PREDICTED: similar to FKBP12-rapamycin com... 105 6e-022 emb|CAG01719.1| unnamed protein product [Tetraodon nigrovir... 105 6e-022 emb|CAG30554.1| TorA protein [Emericella nidulans] 104 8e-022 ref|XP_663586.1| hypothetical protein AN5982.2 [Aspergillus... 104 8e-022 >gb|EAA71932.1| hypothetical protein FG08133.1 [Gibberella zeae PH-1] ref|XP_388309.1| hypothetical protein FG08133.1 [Gibberella zeae PH-1] Length = 2423 Score = 113 bits (261), Expect = 2e-024 Identities = 47/63 (74%), Positives = 56/63 (88%) Frame = -1
WHEGLEEASRLYFG +HN+E M ATL PLH LL++GPETLRE++F QAFGRDL+EA DWC Sbjct: 1886 WHEGLEEASRLYFG-DHNIEGMFATLEPLHELLERGPETLREISFAQAFGRDLKEAQDWC 1944
++Y
Sbjct: 1945 RQY 1947 ------------------ gnl|ti|818422181 name:POAA-aaa47a12.g1 mate_pair:818422668 (899 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_640629.1| hypothetical protein DDB0214908 [Dictyoste... 81 8e-014 ref|NP_175425.2| TOR (TARGET OF RAPAMYCIN) [Arabidopsis tha... 66 3e-009 gb|AAF76442.1| Contains strong similarity to rapamycin asso... 66 3e-009 emb|CAB40167.1| SPBC216.07c [Schizosaccharomyces pombe] >gi... 65 5e-009 emb|CAG89768.1| unnamed protein product [Debaryomyces hanse... 65 5e-009 sp|Q9Y7K2|TOR2_SCHPO Phosphatidylinositol 3-kinase tor2 (PI... 65 5e-009 gb|AAS53791.1| AFR420Wp [Ashbya gossypii ATCC 10895] >gi|45... 64 7e-009 gb|EAL93322.1| phosphatidylinositol 3-kinase, putative [Asp... 64 1e-008 Yüklə 3,49 Mb. Dostları ilə paylaş:
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