Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|XP_663586.1| hypothetical protein AN5982.2 [Aspergillus... 64 1e-008 ref|XP_505106.1| hypothetical protein [Yarrowia lipolytica]... 64 1e-008 >ref|XP_640629.1| hypothetical protein DDB0214908 [Dictyostelium discoideum] gb|AAO43977.1| Tor [Dictyostelium discoideum] gb|EAL66546.1| hypothetical protein DDB0214908 [Dictyostelium discoideum] Length = 2380
Identities = 33/41 (80%), Positives = 37/41 (90%) Frame = +1
RL+G Q NV++WQSILAVHSLVI P EELDMWLKF+GLCRK Sbjct: 1504 RLRGCQHNVDIWQSILAVHSLVISPHEELDMWLKFVGLCRK 1544 Score = 80.1 bits (181), Expect = 1e-013 Identities = 35/45 (77%), Positives = 40/45 (88%) Frame = +3 Query: 114 ESYNRAYKVVVRIQQLSELEEIVEYKKSRDNLERQGMIRNTWKQR 248 ESYNRAYKVVVR+QQLSELEEI+EYKK D+ ER+ MI+NTWK R Sbjct: 1460 ESYNRAYKVVVRLQQLSELEEIIEYKKCVDSPERRNMIKNTWKTR 1504 ------------- gnl|ti|818422679 name:POAA-aaa47e02.b1 mate_pair:818422196 (361 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAF80384.1| cycloartenol synthase [Dictyostelium discoid... 47 3e-004 ref|XP_646246.1| hypothetical protein DDB0191311 [Dictyoste... 47 3e-004 gb|AAS01524.1| cycloartenol synthase [Centella asiatica] 45 0.001 dbj|BAB83086.1| cycloartenol synthase [Betula platyphylla] 45 0.001 emb|CAG08284.1| unnamed protein product [Tetraodon nigrovir... 44 0.002 ref|XP_795497.1| PREDICTED: similar to Lanosterol synthase ... 44 0.002 dbj|BAC37102.1| unnamed protein product [Mus musculus] 44 0.002 dbj|BAC31739.1| unnamed protein product [Mus musculus] 44 0.002 ref|XP_579502.1| PREDICTED: hypothetical protein XP_579502 ... 44 0.002 sp|P48450|ERG7_RAT Lanosterol synthase (Oxidosqualene--lano... 44 0.002 >gb|AAF80384.1| cycloartenol synthase [Dictyostelium discoideum] Length = 706
Identities = 18/23 (78%), Positives = 19/23 (82%) Frame = -1
GHWAGDYGGPMFLLPG I Y+ Sbjct: 77 GHWAGDYGGPMFLLPGLVITCYV 99 --------------------- gnl|ti|818422200 name:POAA-aaa47e10.g1 (447 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAP45170.1| putative nuclear WD protein [Solanum bulboca... 50 7e-005 gb|AAP45158.1| putative dopamine-responsive protein [Solanu... 50 7e-005 dbj|BAB73450.1| all1751 [Nostoc sp. PCC 7120] >gi|17229243|... 42 0.017 ref|YP_317531.1| Cobalamin synthesis protein, CobW [Nitroba... 42 0.017 ref|XP_473752.1| OSJNBa0083N12.6 [Oryza sativa (japonica cu... 41 0.031 ref|NP_875897.1| Putative GTPase, G3E family [Prochlorococc... 40 0.041 dbj|BAD36713.1| PRLI-interacting factor L-like [Oryza sativ... 40 0.041 ref|NP_178163.1| unknown protein [Arabidopsis thaliana] >gi... 40 0.074 gb|AAG31652.1| PRLI-interacting factor L [Arabidopsis thali... 39 0.099 ref|NP_173025.1| unknown protein [Arabidopsis thaliana] >gi... 39 0.099 >gb|AAP45170.1| putative nuclear WD protein [Solanum bulbocastanum] Length = 432
Identities = 21/29 (72%), Positives = 28/29 (96%) Frame = -2
Q+A+ADRIILNK+DLV++SE+EL+ KRIK Sbjct: 232 QVAYADRIILNKIDLVTESELELLTKRIK 260 ------------ gnl|ti|818422689 name:POAA-aaa47g04.b1 mate_pair:818422209 (721 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAW44910.1| cytoplasm protein, putative [Cryptococcus ne... 115 2e-024 gb|AAO72071.1| putative membrane protein [Nectria haematoco... 113 8e-024 gb|AAN86012.1| unknown [Nectria haematococca] 113 8e-024 emb|CAG90009.1| unnamed protein product [Debaryomyces hanse... 112 2e-023 sp|Q03034|YD39_YEAST Hypothetical 56.2 kDa protein in PAD1-... 107 6e-022 gb|EAA72586.1| hypothetical protein FG04669.1 [Gibberella z... 99 3e-019 gb|EAA78219.1| hypothetical protein FG06434.1 [Gibberella z... 93 2e-017 ref|ZP_00140684.2| COG0043: 3-polyprenyl-4-hydroxybenzoate ... 93 2e-017 gb|AAG03643.1| conserved hypothetical protein [Pseudomonas ... 93 2e-017 ref|XP_718068.1| carboxy-lyase UbiD-like protein [Candida a... 90 1e-016 >gb|AAW44910.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] ref|XP_572217.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 404 Score = 115 bits (266), Expect = 2e-024 Identities = 54/136 (39%), Positives = 70/136 (51%) Frame = -1
D G+DCPWAL FG PP A M P+PD +E Y+G Sbjct: 156 DEGKDCPWALCFGVPPAAIMTSSMPIPDGVSEGSYIG----------------------- 192
G + V+KCETND+LVPA SEIVFEG +S++E A EGPFGEMH Sbjct: 193 --------------TFIGESIPVVKCETNDLLVPATSEIVFEGFLSVTETAPEGPFGEMH 238
G +++G + P++ V Sbjct: 239 GYVFQGNSRDSPVYKV 254 ------------ gnl|ti|818422209 name:POAA-aaa47g04.g1 mate_pair:818422689 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA78219.1| hypothetical protein FG06434.1 [Gibberella z... 54 1e-005 ref|XP_718068.1| carboxy-lyase UbiD-like protein [Candida a... 52 3e-005 gb|EAA72586.1| hypothetical protein FG04669.1 [Gibberella z... 50 1e-004 gb|AAG03643.1| conserved hypothetical protein [Pseudomonas ... 49 3e-004 ref|ZP_00140684.2| COG0043: 3-polyprenyl-4-hydroxybenzoate ... 49 4e-004 gb|AAO72071.1| putative membrane protein [Nectria haematoco... 40 0.17 gb|AAN86012.1| unknown [Nectria haematococca] 40 0.17 emb|CAG90009.1| unnamed protein product [Debaryomyces hanse... 39 0.30 ref|XP_664768.1| hypothetical protein AN7164.2 [Aspergillus... 38 0.71 gb|EAN31946.1| cullin protein, putative [Theileria parva] >... 38 0.71 >gb|EAA78219.1| hypothetical protein FG06434.1 [Gibberella zeae PH-1] ref|XP_386610.1| hypothetical protein FG06434.1 [Gibberella zeae PH-1] Length = 490 Score = 53.9 bits (119), Expect = 1e-005 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +3
N N L+FR FV+ L+KDGDL +ID+ VD +LEVGA R+V T Sbjct: 30 NSNQGDPQLDFRSFVEVLRKDGDLADIDQEVDPNLEVGAVVRRVSET 76 --------
gnl|ti|818422710 name:POAA-aaa47k12.b1 mate_pair:818422234 (320 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAD70430.1| probable GLUCAN ENDO-1, 3-BETA-GLUCOSIDASE ... 56 4e-007 ref|XP_324462.1| hypothetical protein [Neurospora crassa] >... 56 4e-007 dbj|BAD67019.1| laminarinase [Trichoderma viride] 53 3e-006 emb|CAA58889.1| endo-1,3(4)-beta-glucanase [Hypocrea lixii]... 52 5e-006 gb|AAL84695.1| beta-1,3-glucanase precursor [Hypocrea virens] 52 7e-006 gb|AAL84694.1| beta-1,3-glucanase precursor [Hypocrea virens] 51 1e-005 gb|EAA75332.1| hypothetical protein FG11006.1 [Gibberella z... 43 0.002 gb|AAF80600.1| glucan 1,3-beta-glucosidase GLUC78 precursor... 36 0.44 ref|NP_634276.1| hypothetical protein MM2252 [Methanosarcin... 36 0.44 gb|AAM07785.1| predicted protein [Methanosarcina acetivoran... 35 1.1 >emb|CAD70430.1| probable GLUCAN ENDO-1, 3-BETA-GLUCOSIDASE BGN13.1 PRECURSOR [Neurospora crassa] Length = 798 Score = 56.1 bits (124), Expect = 4e-007 Identities = 22/30 (73%), Positives = 27/30 (90%) Frame = -2
VVY+ PGTY +S TI+MNTDT+LMGDAT+V Sbjct: 110 VVYIPPGTYEISETIFMNTDTVLMGDATDV 139 ------------------ gnl|ti|818422246 name:POAA-aaa47m14.g1 mate_pair:818422721 (600 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_790234.1| PREDICTED: similar to sirtuin 2 (silent ma... 59 1e-007 gb|AAH86280.1| LOC495688 protein [Xenopus laevis] 59 2e-007 ref|XP_650025.1| Sir2 family transcriptional regulator, put... 58 4e-007 ref|XP_684225.1| PREDICTED: similar to NAD-dependent deacet... 57 8e-007 gb|AAL48850.1| RE26822p [Drosophila melanogaster] 56 1e-006 gb|AAG22161.1| CG5085-PA [Drosophila melanogaster] >gi|2464... 56 1e-006 gb|AAH97921.1| Unknown (protein for MGC:115727) [Xenopus la... 56 2e-006 emb|CAG89029.1| unnamed protein product [Debaryomyces hanse... 55 3e-006 ref|XP_638409.1| NAD-dependent deacetylase [Dictyostelium d... 54 6e-006 gb|EAA07580.2| ENSANGP00000011107 [Anopheles gambiae str. P... 54 8e-006 >ref|XP_790234.1| PREDICTED: similar to sirtuin 2 (silent mating type information regulation 2, homolog) 2 [Strongylocentrotus purpuratus] Length = 336 Score = 59.4 bits (132), Expect = 1e-007 Identities = 26/55 (47%), Positives = 38/55 (69%) Frame = +3
+S SAGIPDFRTPG GLY + +Y LP ++F+IG F NP+ F+ ++ ++F Sbjct: 20 ISTSAGIPDFRTPGTGLYDN--LQKYNLPNPQAIFEIGFFKQNPEPFFTLSKELF 72 --------------- gnl|ti|818422247 name:POAA-aaa47m16.g1 mate_pair:818422722 (907 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_642363.1| hypothetical protein DDB0205452 [Dictyoste... 61 8e-008 gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30'... 57 1e-006 gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 ... 57 1e-006 ref|XP_479479.1| putative pre-mRNA splicing factor SF2 [Ory... 57 1e-006 gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'... 57 1e-006 ref|XP_787177.1| PREDICTED: similar to splicing factor, arg... 56 3e-006 ref|NP_190918.3| RSZ32; nucleic acid binding [Arabidopsis t... 51 6e-005 gb|AAP06440.1| similar to NM_006276 splicing factor, argini... 49 3e-004 ref|XP_789661.1| PREDICTED: similar to splicing factor, arg... 49 3e-004 ref|XP_789638.1| PREDICTED: similar to splicing factor, arg... 47 0.002 >ref|XP_642363.1| hypothetical protein DDB0205452 [Dictyostelium discoideum] gb|EAL68389.1| hypothetical protein DDB0205452 [Dictyostelium discoideum] Length = 463 Score = 61.1 bits (136), Expect = 8e-008 Identities = 25/36 (69%), Positives = 28/36 (77%) Frame = -3
CYNC +SGH ARDC E PRNP YADT+GT + D GR Sbjct: 303 CYNCRKSGHYARDCQERPRNPNYADTKGT-LKDSGR 337 Score = 60.7 bits (135), Expect = 1e-007 Identities = 30/74 (40%), Positives = 45/74 (60%) Frame = -2 Query: 492 EHVSLRELRELFEKFGRVLDVQTGQAGYAFVEMEDERDCYDCIRGLDDTMVDGHRITVEK 313 E + R++ E F K G VL+VQTG + +AFV+M+ ERD + + GL + ++ G R+ VEK Sbjct: 14 EKTNKRDIEEYFNKIGPVLNVQTGSSDFAFVDMQYERDGQELL-GLQEIIISGKRVKVEK 72
A+ R H Y
Sbjct: 73 AKTNEEREIHREKY 86 ----------------- gnl|ti|818422251 name:POAA-aaa47m24.g1 mate_pair:818422726 (638 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||A57036 talin - slime mold (Dictyostelium discoideum) 122 1e-026 ref|XP_635646.1| filopodin [Dictyostelium discoideum] >gi|6... 122 1e-026 gb|AAC46586.2| filopodin [Dictyostelium discoideum] >gi|182... 122 1e-026 gb|EAA04618.2| ENSANGP00000019107 [Anopheles gambiae str. P... 98 4e-019 gb|AAV41376.1| talin 1 [Danio rerio] >gi|57222259|ref|NP_00... 96 1e-018 gb|AAH77078.1| Tln1 protein [Danio rerio] 96 1e-018 ref|XP_693872.1| PREDICTED: similar to talin 1 [Danio rerio] 96 1e-018 gb|AAH92742.1| Tln1 protein [Danio rerio] 96 1e-018 ref|XP_637174.1| hypothetical protein DDB0191526 [Dictyoste... 94 6e-018 dbj|BAA75511.1| talin homologue [Dictyostelium discoideum] 94 6e-018 >pir||A57036 talin - slime mold (Dictyostelium discoideum) Length = 2491
Identities = 48/82 (58%), Positives = 64/82 (78%) Frame = -2
WL + IL E G+++ D+ VL KKFFFNDANIDRNDPVQLHLL++QCRD ++E KYPT + Sbjct: 134 WLNNTQILSEQGISENDITVLMKKFFFNDANIDRNDPVQLHLLFVQCRDGIIEGKYPTQR 193
+E+ L+A+QCQV GD+ + Sbjct: 194 EESLALSALQCQVQLGDYNPTK 215 ----------- gnl|ti|818422732 name:POAA-aaa47o14.b1 mate_pair:818422256 (559 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK84355.1| PIMT [Mus musculus] 48 2e-004 gb|AAH73206.1| MGC80481 protein [Xenopus laevis] 48 4e-004 ref|XP_691047.1| PREDICTED: similar to PRIP-interacting pro... 47 8e-004 ref|NP_973978.1| unknown protein [Arabidopsis thaliana] 46 0.001 ref|NP_473430.2| nuclear receptor coactivator 6 interacting... 46 0.001 emb|CAG32216.1| hypothetical protein [Gallus gallus] >gi|57... 46 0.001 gb|AAH26368.1| Ncoa6ip protein [Mus musculus] 46 0.001 ref|XP_232648.3| PREDICTED: similar to PIMT [Rattus norvegi... 46 0.001 ref|XP_519764.1| PREDICTED: similar to PRIP-interacting pro... 46 0.002 ref|XP_791145.1| PREDICTED: similar to PRIP-interacting pro... 46 0.002 >gb|AAK84355.1| PIMT [Mus musculus] Length = 853
Identities = 17/26 (65%), Positives = 22/26 (84%) Frame = -3
GP++ KYW QRYR FSRFD+GI +D+ Sbjct: 633 GPELAKYWAQRYRLFSRFDDGIKLDK 658 ------------ gnl|ti|820218486 name:POAA-aaa48b17.g1 mate_pair:820220972 (436 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_699406.1| PREDICTED: similar to CG3328-PA, partial [... 50 5e-005 ref|XP_628887.1| hypothetical protein DDB0231107 [Dictyoste... 50 6e-005 emb|CAG08769.1| unnamed protein product [Tetraodon nigrovir... 47 5e-004 gb|AAH81179.1| MGC84361 protein [Xenopus laevis] 46 0.001 ref|XP_638706.1| hypothetical protein DDB0191426 [Dictyoste... 45 0.002 gb|AAF47176.3| CG3328-PA [Drosophila melanogaster] >gi|4555... 44 0.004 gb|AAB06761.1| ORFveg132; similar to Caenorhabditis elegans... 43 0.005 ref|XP_586725.2| PREDICTED: similar to CG3328-PA [Bos taurus] 43 0.009 dbj|BAE24803.1| unnamed protein product [Mus musculus] 43 0.009 dbj|BAE20548.1| unnamed protein product [Mus musculus] 43 0.009 >ref|XP_699406.1| PREDICTED: similar to CG3328-PA, partial [Danio rerio] Length = 850
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +1
VIAQE+Q ++P AV E GD V NG T+P LLVVN+ + EN+ Sbjct: 401 VIAQEVQQILPEAVKEGGDVVCANGETIPNLLVVNKERIFMENV 444 ----------- gnl|ti|820218499 name:POAA-aaa48d23.g1 mate_pair:820220984 (441 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA77084.1| alpha-N-acetylglucosaminidase [Nicotiana ta... 73 7e-012 gb|AAB36605.1| alpha-N-acetylglucosaminidase 70 4e-011 gb|AAH53991.1| Alpha-N-acetylglucosaminidase [Homo sapiens]... 70 4e-011 ref|XP_629757.1| hypothetical protein DDB0184151 [Dictyoste... 70 4e-011 ref|NP_000254.2| alpha-N-acetylglucosaminidase precursor [H... 70 4e-011 ref|XP_523654.1| PREDICTED: alpha-N-acetylglucosaminidase [... 70 4e-011 ref|XP_584949.1| PREDICTED: similar to alpha-N-acetylglucos... 70 5e-011 ref|XP_548088.2| PREDICTED: similar to alpha-N-acetylglucos... 70 5e-011 ref|NP_038820.1| alpha-N-acetylglucosaminidase [Mus musculu... 66 7e-010 gb|AAH55733.1| Alpha-N-acetylglucosaminidase [Mus musculus]... 66 7e-010 >emb|CAA77084.1| alpha-N-acetylglucosaminidase [Nicotiana tabacum] Length = 811
Identities = 29/44 (65%), Positives = 37/44 (84%) Frame = -1
L++MR GM PVLP+F+G+VP A+KK FPS+NIT+LG WNT NG Sbjct: 257 LSRMRELGMTPVLPSFSGNVPAALKKIFPSANITRLGDWNTVNG 300 ------------- gnl|ti|820220987 name:POAA-aaa48f09.b1 (245 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00551997.1| IMP dehydrogenase/GMP reductase:Bacteria... 50 2e-005 ref|ZP_00732784.1| sensory transduction histidine kinases [... 49 3e-005 gb|AAO76704.1| two-component system sensor histidine kinase... 48 4e-005 ref|ZP_00516653.1| ATP-binding region, ATPase-like:Histidin... 47 1e-004 gb|EAN29195.1| PAS [Magnetococcus sp. MC-1] >gi|69257140|re... 47 1e-004 ref|YP_374236.1| PAS/PAC sensor hybrid histidine kinase [Pe... 47 1e-004 ref|ZP_00842790.1| sensor histidine kinase with a response ... 46 2e-004 ref|NP_641617.1| two-component system sensor protein [Xanth... 45 5e-004 ref|NP_441406.1| hybrid sensory kinase [Synechocystis sp. P... 45 5e-004 gb|AAK22572.1| sensory box histidine kinase [Caulobacter cr... 45 5e-004 >ref|ZP_00551997.1| IMP dehydrogenase/GMP reductase:Bacterial extracellular solute-binding protein, family 3:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Desulfuromonas acetoxidans DSM 684] gb|EAM70499.1| IMP dehydrogenase/GMP reductase:Bacterial extracellular solute-binding protein, family 3:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Desulfuromonas acetoxidans DSM 684] Length = 1279 Score = 49.7 bits (109), Expect = 2e-005 Identities = 22/35 (62%), Positives = 29/35 (82%) Frame = +1
+VD+ +L QIL+NL+ NAIKFT QG VTL VQK++ Sbjct: 909 LVDAVRLRQILLNLIGNAIKFTEQGYVTLRVQKIF 943 ------------- gnl|ti|820218508 name:POAA-aaa48f21.g1 (826 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_646141.1| hypothetical protein DDB0190426 [Dictyoste... 59 2e-007 ref|XP_649271.1| conserved hypothetical protein [Entamoeba ... 50 2e-004 ref|XP_482165.1| unknown protein [Oryza sativa (japonica cu... 47 0.001 gb|AAM15102.1| hypothetical protein [Arabidopsis thaliana] ... 46 0.002 ref|NP_850068.1| unknown protein [Arabidopsis thaliana] >gi... 46 0.002 gb|AAY63998.1| unknown [Brassica napus] 44 0.011 gb|AAF16643.1| T23J18.20 [Arabidopsis thaliana] 43 0.019 ref|NP_172621.2| unknown protein [Arabidopsis thaliana] 43 0.019 ref|NP_176367.1| unknown protein [Arabidopsis thaliana] >gi... 42 0.046 emb|CAA10487.1| hypothetical protein [Arabidopsis thaliana] 42 0.046 >ref|XP_646141.1| hypothetical protein DDB0190426 [Dictyostelium discoideum] gb|EAL72172.1| hypothetical protein DDB0190426 [Dictyostelium discoideum] Length = 549 Score = 59.4 bits (132), Expect = 2e-007 Identities = 28/46 (60%), Positives = 33/46 (71%) Frame = -3
VALLIEP TL GTI GVYLH FP +ILLLL+I + T+ +T K Sbjct: 212 VALLIEPLTLAGTIFGVYLHTYFPPLVILLLLVITLGFTSYKTISK 257 Score = 45.5 bits (99), Expect = 0.003 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = -1 Query: 670 IVSGASVANLVQNFPKRHPTFPNKPLIDYS 581 +V+G ++AN +QNFP+RHP F NK LIDYS Sbjct: 183 LVAGCALANFIQNFPRRHP-FSNKHLIDYS 211 ---------------- gnl|ti|820218535 name:POAA-aaa48l13.g1 (322 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_659964.1| hypothetical protein AN2360.2 [Aspergillus... 48 7e-005 ref|XP_501151.1| hypothetical protein [Yarrowia lipolytica]... 48 1e-004 gb|EAL84812.1| acid phosphatase [Aspergillus fumigatus Af29... 47 2e-004 gb|EAA73288.1| hypothetical protein FG04504.1 [Gibberella z... 46 4e-004 ref|XP_758335.1| hypothetical protein UM02188.1 [Ustilago m... 45 7e-004 ref|XP_329767.1| hypothetical protein [Neurospora crassa] >... 45 0.001 emb|CAG84313.1| unnamed protein product [Debaryomyces hanse... 44 0.002 ref|XP_504456.1| hypothetical protein [Yarrowia lipolytica]... 44 0.002 sp|Q12546|PPA_ASPFI Acid phosphatase precursor (pH 6-optimu... 42 0.006 gb|AAB31768.1| acid phosphatase, orthophosphoric monoester ... 42 0.006 >ref|XP_659964.1| hypothetical protein AN2360.2 [Aspergillus nidulans FGSC A4] gb|EAA64471.1| hypothetical protein AN2360.2 [Aspergillus nidulans FGSC A4] Length = 497 Score = 48.5 bits (106), Expect = 7e-005 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = +1
GGPFG N Q+++L DL +V RDVTPWVIV GH Sbjct: 331 GGPFGAKN---QQLEFLEADLASVDRDVTPWVIVAGH 364 -------------- gnl|ti|820221029 name:POAA-aaa48p15.b1 mate_pair:820218553 (797 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_532884.2| PREDICTED: similar to WD repeat domain 35 ... 124 5e-027 emb|CAG12464.1| unnamed protein product [Tetraodon nigrovir... 123 1e-026 dbj|BAC27232.1| unnamed protein product [Mus musculus] 123 1e-026 ref|NP_766058.2| WD repeat domain 35 [Mus musculus] >gi|347... 123 1e-026 dbj|BAC39081.1| unnamed protein product [Mus musculus] 123 1e-026 dbj|BAB29866.1| unnamed protein product [Mus musculus] 123 1e-026 dbj|BAC26663.1| unnamed protein product [Mus musculus] 123 1e-026 dbj|BAD32429.1| mKIAA1336 protein [Mus musculus] 123 1e-026 ref|XP_233960.3| PREDICTED: similar to mKIAA1336 protein [R... 123 1e-026 ref|XP_419970.1| PREDICTED: similar to WD repeat domain 35 ... 121 4e-026 >ref|XP_532884.2| PREDICTED: similar to WD repeat domain 35 [Canis familiaris] Length = 1356
Identities = 52/70 (74%), Positives = 56/70 (80%) Frame = +2
T +GSV V TWN Y+KLTTSD GLIIVWMLYKG WYEEMINNRNKSVV+ M W + Sbjct: 66 TLEGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWYEEMINNRNKSVVRSMSWNA 125
DGQKICIVYE Sbjct: 126 DGQKICIVYE 135 Score = 47.6 bits (104), Expect = 7e-004 Identities = 20/24 (83%), Positives = 22/24 (91%) Frame = +3 Query: 33 NSDQGWIACGGEGGLLKVLKLESQ 104 N DQG+IACGGE GLLKVLKLE+Q Sbjct: 23 NKDQGFIACGGEDGLLKVLKLETQ 46 Score = 43.4 bits (94), Expect = 0.014 Identities = 17/22 (77%), Positives = 22/22 (100%) Frame = +2 Query: 221 QVKGLAAPSNLSMNQSLEGHTG 286 +++GLAAPSNLSMNQ+LEGH+G Yüklə 3,49 Mb. Dostları ilə paylaş:
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