Webmaster's Note: As Gerard says below, his Fourth Report came in two parts



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Sbjct: 3 LLLYVGGLLIFLLLWMRAKGFEYVIVHHRWIFVCLFLLPLSVIFDVYYYARAWLVFKMCS 62
Query: 413 APHKHPERVAVIQERVREWARQGKKVRMCTARPGWMTVSPRHALYKKTLFTVECDLSDIL 234

AP +H RV IQ++VR+W +G K MCT RPGW+TVS R YK T + +L DIL

Sbjct: 63 APKQHDRRVKDIQDQVRQWKAEGGKNFMCTGRPGWLTVSLRVGKYKNTHKNIMINLMDIL 122
Query: 233 ELDTKKRILRVEPSVNMLQLLDYLLPRGYTLPMIPELDELTVGGLINGYGMTSS 72

E+DTK++++RVEP VNM Q+ L G+TLP++PELD+LTVGGLI G G+ SS

Sbjct: 123 EVDTKRQVVRVEPLVNMGQVTALLNSIGWTLPVVPELDDLTVGGLIMGTGIESS 176

----------

gnl|ti|818421999 name:POAA-aaa61n22.g1

mate_pair:818423021

(518 letters)

Score E


Sequences producing significant alignments: (bits) Value

gb|AAC63276.1| apocytochrome b [Physarum polycephalum] >gi|... 95 9e-019

gb|AAD03098.1| apocytochrome b [Porphyra purpurea] >gi|1146... 84 2e-015

ref|YP_052923.1| apocytochrome b [Saprolegnia ferax] >gi|48... 84 3e-015

ref|NP_037603.1| apocytochrome b [Phytophthora infestans] >... 83 4e-015

gb|AAA32026.2| cytochrome b [Phytophthora megasperma] >gi|6... 82 1e-014

gb|AAP94705.1| apocytochrome b [Emiliania huxleyi] >gi|4120... 81 1e-014

ref|YP_203364.1| apocytochrome b [Mortierella verticillata]... 80 2e-014

ref|ZP_00839764.1| cytochrome b/c1 precursor [Rhodopseudomo... 80 3e-014

ref|ZP_00810681.1| Cytochrome c1:Cytochrome b/b6, N-termina... 80 3e-014

ref|ZP_00803735.1| Cytochrome c1:Cytochrome b/b6, N-termina... 80 4e-014

>gb|AAC63276.1| apocytochrome b [Physarum polycephalum]

gb|AAC63275.1| apocytochrome b [Physarum polycephalum]

Length = 392


Score = 95.1 bits (235), Expect = 9e-019

Identities = 61/108 (56%), Positives = 69/108 (63%), Gaps = 4/108 (3%)

Frame = +1
Query: 76 ANGASFFFIVVYAHLFPGLYYGSYFFP-PIIMVLGVIILLLMIITSFYD-MFYLGKNVLL 249

ANGASFFFIVVYAHLF GLYYGSYFFP ++ GVIILLLMIITSF + G+

Sbjct: 81 ANGASFFFIVVYAHLFRGLYYGSYFFPRRLLWCSGVIILLLMIITSFLGYVLPWGQMSYW 140
Query: 250 GSYVITNF-PLLFLLWSKNCKLAWSGFSVNNPTY-KIFLLTLNLPFVL 387

+ VITN + K WSGFSV+NPT K F L LPFV+

Sbjct: 141 AATVITNLASTVPFFGQKIVNWLWSGFSVDNPTLSKFFSLHYILPFVI 188
Score = 72.4 bits (176), Expect = 6e-012

Identities = 59/138 (42%), Positives = 73/138 (52%), Gaps = 8/138 (5%)

Frame = +2
Query: 89 LFSLL*YMLIFFPVCIMVHTFFRRLLWCSE*LFYY**LLLLFTICFT-----WGKMSYWA 253

LF L Y FFP RRLLWCS + LLL+ F WG+MSYWA

Sbjct: 95 LFRGLYYGSYFFP---------RRLLWCSGVII----LLLMIITSFLGYVLPWGQMSYWA 141
Query: 254 ATLLL-ISLYCSFFGQKIVNWLGVVF-L*IILLTKFFS*H*IY-LLY*S*KFIQFNLIHQ 424

AT++ ++ FFGQKIVNWL F + L+KFFS H I + + + L+HQ

Sbjct: 142 ATVITNLASTVPFFGQKIVNWLWSGFSVDNPTLSKFFSLHYILPFVILAFVLLHLALLHQ 201
Query: 425 SSNGQSSR*GRSNDEILF 478

S +G SS GRS DEI F

Sbjct: 202 SGSGTSSGWGRSIDEIPF 21

---------------

gnl|ti|818420239 name:POAA-aaa62c09.g1

mate_pair:820220753

(717 letters)

Score E


Sequences producing significant alignments: (bits) Value

gb|AAD52096.2| beige protein homolog [Dictyostelium discoid... 118 2e-025

ref|XP_646110.1| hypothetical protein DDB0191124 [Dictyoste... 118 2e-025

gb|AAC78268.1| putative transport protein [Arabidopsis thal... 78 3e-013

ref|NP_192175.2| unknown protein [Arabidopsis thaliana] 78 3e-013

ref|XP_469698.1| putative beige protein [Oryza sativa (japo... 72 2e-011

gb|AAD25803.1| Similar to gb|U70015 lysosomal trafficking r... 72 2e-011

ref|NP_171805.1| unknown protein [Arabidopsis thaliana] 72 2e-011

ref|XP_799239.1| PREDICTED: similar to WD repeat and FYVE d... 69 2e-010

gb|AAY40903.1| unknown [Homo sapiens] 66 1e-009

ref|NP_055806.2| WD repeat and FYVE domain containing 3 iso... 66 1e-009

>gb|AAD52096.2| beige protein homolog [Dictyostelium discoideum]

Length = 3619
Score = 118 bits (295), Expect = 2e-025

Identities = 73/213 (34%), Positives = 120/213 (56%), Gaps = 18/213 (8%)

Frame = -2
Query: 665 NMF*IWKILMQTK----LDILNEFLVYKTPKG------ETVDLKVNGFDLLMHDSHS--- 525

N +W++L+ K ++ L L K G E +DLK GF+LL + S +

Sbjct: 2320 NSIKLWRLLLSLKTSSYIESLATVLQLKVSSGSNQRQSEIIDLKP-GFELLRNTSGNGAF 2378
Query: 524 ----FLFWLGDEGTQASISNVFDEQLKKVWTSNRIAEQRATLD-TAKHIESRRAARISRR 360

F W+ D +I+ VF+E KK S + E++ + + T ++SRR R+S++

Sbjct: 2379 NNDEFKLWINDN--IQTITQVFEENPKKQHLSFKNNEKKHSSEHTLPSLKSRRTERLSKK 2436
Query: 359 ERKVTADVANHAKIESYRDKHLRVIVENELTEYRKRRQLEADRIQFVSKLWDTLKDQLTR 180

+R+ D ++ + + K + V +E +K +QLE+D+ +F + W+ ++ Q+TR

Sbjct: 2437 QRQDRKDQSHQEEKSKHITKKAQYFVRSESDRRKKIKQLESDKQKFNAIQWENMRAQITR 2496
Query: 179 ERAVWGPATLHPLEKWQMDPTEGPYRMRKKTER 81

ERAVWGP+ HPL+KW++D TEGPYRMRKK E+

Sbjct: 2497 ERAVWGPSEPHPLDKWKLDSTEGPYRMRKKMEK 2529

--------------

PP18_Resultat
gnl|ti|818420255 name:POAA-aaa62e17.g1

mate_pair:820220767

(686 letters)

Score E


Sequences producing significant alignments: (bits) Value
ref|ZP_00314749.1| COG3210: Large exoproteins involved in h... 55 2e-006

ref|ZP_00110033.1| COG2133: Glucose/sorbosone dehydrogenase... 55 2e-006

ref|ZP_00510317.1| hypothetical protein CtheDRAFT_0722 [Clo... 49 1e-004

ref|ZP_00317746.1| hypothetical protein Mdeg02000213 [Micro... 47 7e-004

gb|AAO78054.1| conserved hypothetical protein [Bacteroides ... 46 0.001

ref|ZP_00816094.1| Fibronectin, type III [Marinobacter aqua... 46 0.001

gb|AAO76885.1| beta-glucosidase (gentiobiase) [Bacteroides ... 43 0.008

gb|AAO78406.1| beta-glucosidase [Bacteroides thetaiotaomicr... 42 0.014

ref|YP_245255.1| glucan 1,4-beta-glucosidase [Xanthomonas c... 40 0.068

gb|AAO78115.1| beta-glucosidase (gentiobiase) [Bacteroides ... 40 0.068

>ref|ZP_00314749.1| COG3210: Large exoproteins involved in heme utilization or adhesion

[Microbulbifer degradans 2-40]

Length = 1504
Score = 55.5 bits (132), Expect = 2e-006

Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)

Frame = +3
Query: 372 FINRSDDGVRLSVNGVQLVDDWTTHPPTPSSGT-ISLVGGQKYPIILQYFQ 521

F SDDGVRL V+G ++D+WT H PT + T ++L GQ YP+ LQY++

Sbjct: 559 FQTESDDGVRLWVDGNLVIDNWTNHSPTVNISTGVTLTAGQAYPVTLQYYE 609

Score = 45.4 bits (106), Expect = 0.002

Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Frame = +3


Query: 372 FINRSDDGVRLSVNGVQLVDDWTTHP-PTPSSGTISLVGGQKYPIILQYFQ 521

F SDDGVRL V G L+++W+ H T +S ISL G+ YPI +Q+++

Sbjct: 726 FQTDSDDGVRLWVGGQLLINNWSDHAVVTDTSSGISLEAGETYPIQMQFYE 776

---------------

gnl|ti|820221470 name:POAA-aaa63a04.b1

(843 letters)


Score E


Sequences producing significant alignments: (bits) Value
emb|CAH70372.1| OTTHUMP00000018325 [Homo sapiens] 48 4e-004

emb|CAH70373.1| OTTHUMP00000018324 [Homo sapiens] >gi|57162... 48 4e-004

ref|XP_509651.1| PREDICTED: similar to KIAA0564 protein [Pa... 48 4e-004

ref|NP_055873.1| hypothetical protein LOC23078 isoform a [H... 48 4e-004

emb|CAF32700.1| hypothetical protein [Leishmania infantum] 47 6e-004

emb|CAJ02279.1| hypothetical protein, conserved [Leishmania... 47 8e-004

gb|AAX79361.1| hypothetical protein, conserved [Trypanosoma... 46 0.002

ref|XP_785349.1| PREDICTED: similar to CG12149-PA [Strongyl... 46 0.002

ref|XP_214237.3| PREDICTED: similar to 1300010F03Rik protei... 46 0.002

ref|XP_761739.1| hypothetical protein UM05592.1 [Ustilago m... 44 0.009

>emb|CAH70372.1| OTTHUMP00000018325 [Homo sapiens]

Length = 481


Score = 48.1 bits (113), Expect = 4e-004

Identities = 27/57 (47%), Positives = 30/57 (52%)

Frame = -3
Query: 679 FFFHINKYQTLLKHRTKKELDDQKIACTHPNFRVIALALPVCDPSQMFFSNPRPPPL 509

F +Y LL+ TKKELD KI NFRVIAL LPV + NP PPL

Sbjct: 205 FLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIALGLPV----PRYSGNPLDPPL 257

Score = 40.0 bits (92), Expect = 0.099

Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 5/49 (10%)

Frame = -1


Query: 501 LSSFTKKKKKNSKM-----KIKII*SAI*VPPFQGSPLDPPLRSRFQAR 370

L TKK+ + K+ ++I + VP + G+PLDPPLRSRFQAR

Sbjct: 216 LRDHTKKELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQAR 264

---------------

gnl|ti|820221483 name:POAA-aaa63c12.b1

mate_pair:818423634

(909 letters)

Score E


Sequences producing significant alignments: (bits) Value
ref|NP_062864.1| hypothetical protein PhpooMp19 [Physarum p... 410 e-113

ref|NP_062863.1| hypothetical protein PhpooMp18 [Physarum p... 238 2e-061

emb|CAG84829.1| unnamed protein product [Debaryomyces hanse... 41 0.066

gb|EAA19556.1| synthetic antigen of P.falciparum [Plasmodiu... 38 0.43

ref|XP_447595.1| unnamed protein product [Candida glabrata]... 38 0.56

ref|XP_680025.1| conserved hypothetical protein [Plasmodium... 37 0.73

ref|XP_636117.1| hypothetical protein DDB0188581 [Dictyoste... 37 0.73

emb|CAB40396.1| hypothetical protein [Guillardia theta] >gi... 37 0.95

ref|NP_705469.1| hypothetical protein [Plasmodium falciparu... 37 1.2

emb|CAG35342.1| conserved hypothetical protein [Desulfotale... 37 1.2

>ref|NP_062864.1| hypothetical protein PhpooMp19 [Physarum polycephalum]

dbj|BAB08098.1| ORF18 [Physarum polycephalum]

Length = 231
Score = 410 bits (1055), Expect = e-113

Identities = 214/216 (99%), Positives = 214/216 (99%)

Frame = -2
Query: 668 MQNFIFDMSSQPFNMKVDGRLIINELIKNARQLKNPEKKYLFSVYILVSGKRANVLPSEA 489

MQNFIFDMSS PFNMKVDGRLIINELIKNARQLKNPEKKYLFSVYILVSGKRANVLPSEA

Sbjct: 1 MQNFIFDMSSPPFNMKVDGRLIINELIKNARQLKNPEKKYLFSVYILVSGKRANVLPSEA 60
Query: 488 KILISDALDELNDSKLAKIGDKKYTILKRVLKRFESIRTRLSKVLNGSEFSDTIANDTGH 309

KILISDALDELNDSKLAKIGDKKYTILKRVLKRFESIRTRLSKVLNGSEFSDTIANDTGH

Sbjct: 61 KILISDALDELNDSKLAKIGDKKYTILKRVLKRFESIRTRLSKVLNGSEFSDTIANDTGH 120
Query: 308 VKKSIMNLILRSKDQKPFTSFNINILTIAKRIKDYVINDNDILMNTDKDKLAQAIESAKL 129

VKKSIMNLILRSKDQKPFTSFNINILTIAKRIKDYVINDNDILMNTDKDKLAQAIESAKL

Sbjct: 121 VKKSIMNLILRSKDQKPFTSFNINILTIAKRIKDYVINDNDILMNTDKDKLAQAIESAKL 180
Query: 128 IDLSKPKKSKNKIDPSKAVVNTTSKKKNKRGSTPNS 21

IDLSKPKKSKNKIDPSKAVVNTTSKKKNKRGSTP S

Sbjct: 181 IDLSKPKKSKNKIDPSKAVVNTTSKKKNKRGSTPAS 216

-----------------

gnl|ti|820221512 name:POAA-aaa63i08.b1

mate_pair:818423665

(907 letters)

Score E


Sequences producing significant alignments: (bits) Value

ref|XP_640592.1| hypothetical protein DDB0204621 [Dictyoste... 82 3e-014

ref|ZP_00315355.1| COG1940: Transcriptional regulator/sugar... 64 7e-009

gb|EAN11001.1| ROK [Enterococcus faecium DO] >gi|69244118|r... 62 2e-008

gb|EAN10952.1| ROK [Enterococcus faecium DO] >gi|69244339|r... 61 6e-008

ref|NP_784016.1| fructokinase [Lactobacillus plantarum WCFS... 60 1e-007

emb|CAA83667.1| fructokinase [Pediococcus pentosaceus] >gi|... 59 2e-007

ref|ZP_00322990.1| COG1940: Transcriptional regulator/sugar... 58 5e-007

ref|YP_149057.1| fructokinases [Geobacillus kaustophilus HT... 54 6e-006

gb|EAN10452.1| ROK [Enterococcus faecium DO] >gi|69245019|r... 51 6e-005

pdb|1XC3|A Chain A, Structure Of A Putative Fructokinase Fr... 47 0.001

>ref|XP_640592.1| hypothetical protein DDB0204621 [Dictyostelium discoideum]

gb|EAL66614.1| hypothetical protein DDB0204621 [Dictyostelium discoideum]

Length = 311


Score = 82.0 bits (201), Expect = 3e-014

Identities = 38/63 (60%), Positives = 47/63 (74%)

Frame = +1
Query: 31 DSDPVWEITGHYLAALCANLVLTVSPSVIVLGGGVMNRECLYDIVRKKTLELLKGYIKSP 210

D PVW I G+YLA LCAN+ +SP VIVLGGGV+NR LY I+R +T+++L GYIKS

Sbjct: 212 DDHPVWLIIGNYLAQLCANITCLLSPQVIVLGGGVLNRSILYPIIRTETIKILNGYIKSK 271
Query: 211 KLT 219

LT

Sbjct: 272 YLT 274



Score = 37.7 bits (86), Expect = 0.55

Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Frame = +2
Query: 272 SDHLTEK-INTYIVRSKFGNHAGLVGALELARAAL 373

S +LT I+ YIV+S F +HAG +G+LELAR AL

Sbjct: 270 SKYLTNDFIDQYIVQSPFASHAGSIGSLELARRAL 304

------------------------

gnl|ti|818423665 name:POAA-aaa63i08.g1

mate_pair:820221512

(907 letters)

Score E


Sequences producing significant alignments: (bits) Value

ref|NP_192450.1| nucleic acid binding / nucleotide binding ... 63 1e-008

gb|AAY21208.1| U3-55K-like protein 2 [Arabidopsis thaliana] 55 3e-006

gb|EAA76734.1| hypothetical protein FG06802.1 [Gibberella z... 55 4e-006

emb|CAG06962.1| unnamed protein product [Tetraodon nigrovir... 55 4e-006

gb|AAH44361.1| LOC402808 protein [Danio rerio] 54 7e-006

ref|XP_692816.1| PREDICTED: hypothetical protein XP_687724 ... 54 7e-006

emb|CAD78372.1| putative WD-repeat containing protein [Rhod... 51 5e-005

dbj|BAB74051.1| WD-40 repeat protein [Nostoc sp. PCC 7120] ... 50 8e-005

ref|YP_320694.1| WD-40 repeat [Anabaena variabilis ATCC 294... 50 8e-005

ref|ZP_00157731.2| COG2319: FOG: WD40 repeat [Anabaena vari... 50 8e-005

>ref|NP_192450.1| nucleic acid binding / nucleotide binding [Arabidopsis thaliana]

emb|CAB81083.1| U3 snoRNP-associated-like protein [Arabidopsis thaliana]

gb|AAN15644.1| U3 snoRNP-associated-like protein [Arabidopsis thaliana]

gb|AAM20668.1| U3 snoRNP-associated-like protein [Arabidopsis thaliana]

Length = 504


Score = 63.2 bits (152), Expect = 1e-008

Identities = 31/56 (55%), Positives = 36/56 (64%)

Frame = +1
Query: 649 RYFATGGEDRAIIIWDFSTGEYINKFLGHMGGVTRLCFVDGVNNLYSCSIDRTVKV 816

RY ATGG DR + IWD T E++ F GH V+ LCF G + LYS S DRTVKV

Sbjct: 235 RYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKV 290

----------

gnl|ti|818423675 name:POAA-aaa63k10.g1

mate_pair:820221523

(897 letters)

Score E


Sequences producing significant alignments: (bits) Value

emb|CAD70984.1| related to ACYL-COA DEHYDROGENASE, LONG-CHA... 64 5e-009

gb|EAL88938.1| acyl-CoA dehydrogenase, putative [Aspergillu... 63 1e-008

gb|AAW41527.1| acyl-CoA dehydrogenase, long-chain specific ... 63 1e-008

gb|EAA69983.1| hypothetical protein FG10285.1 [Gibberella z... 62 2e-008

ref|XP_369515.1| hypothetical protein MG05949.4 [Magnaporth... 58 5e-007

ref|XP_663998.1| hypothetical protein AN6394.2 [Aspergillus... 57 1e-006

ref|XP_757613.1| hypothetical protein UM01466.1 [Ustilago m... 47 9e-004

emb|CAD21279.1| probable cytochrome b5 [Neurospora crassa] ... 42 0.022

gb|EAL93069.1| cytochrome b5, putative [Aspergillus fumigat... 42 0.029

ref|XP_663432.1| hypothetical protein AN5828.2 [Aspergillus... 42 0.038

>emb|CAD70984.1| related to ACYL-COA DEHYDROGENASE, LONG-CHAIN SPECIFIC PRECURSOR

[Neurospora crassa]

ref|XP_331316.1| hypothetical protein [Neurospora crassa]

gb|EAA31370.1| hypothetical protein [Neurospora crassa]

Length = 519


Score = 64.3 bits (155), Expect = 5e-009

Identities = 30/34 (88%), Positives = 30/34 (88%)

Frame = +1
Query: 232 DMHPGGAAVLRDVAGQDATSAFYNLHRHEVLGKY 333

D HPGG AVLR VAGQDATSAFYNLHRHEVL KY

Sbjct: 42 DAHPGGEAVLRQVAGQDATSAFYNLHRHEVLIKY 75

Score = 52.0 bits (123), Expect = 3e-005

Identities = 23/44 (52%), Positives = 30/44 (68%)

Frame = +2


Query: 569 YARLKIGLVEGESPEVETPKPGALSHVPYAEPTFLKSEFASPYY 700

Y L IG ++GE + TP+PG LS VPYAEP +L +F SPY+

Sbjct: 75 YNDLAIGSIKGEKQSIITPRPGDLSPVPYAEPLWLTPQFKSPYF 118

------------

nl|ti|820221549 name:POAA-aaa63o18.b1

mate_pair:818423699

(596 letters)

Score E


Sequences producing significant alignments: (bits) Value

ref|ZP_00555236.1| hypothetical protein JannDRAFT_2512 [Jan... 113 5e-024

ref|ZP_00624030.1| conserved hypothetical protein [Nitrobac... 61 2e-008

ref|YP_094659.1| hypothetical protein lpg0623 [Legionella p... 59 1e-007

ref|NP_819252.1| hypothetical protein CBU_0206 [Coxiella bu... 58 2e-007

ref|YP_126022.1| hypothetical protein lpl0660 [Legionella p... 58 2e-007

ref|YP_174187.1| sugar ABC transporter permease [Bacillus c... 46 7e-004

ref|YP_095514.1| hypothetical protein lpg1485 [Legionella p... 44 0.003

ref|ZP_00538322.1| K+ transporting ATPase, A subunit [Exigu... 41 0.029

ref|YP_174714.1| sugar ABC transporter permease [Bacillus c... 40 0.050

ref|ZP_00740521.1| Hypothetical membrane spanning protein [... 40 0.065

>ref|ZP_00555236.1| hypothetical protein JannDRAFT_2512 [Jannaschia sp. CCS1]

gb|EAM67528.1| hypothetical protein JannDRAFT_2512 [Jannaschia sp. CCS1]

Length = 125


Score = 113 bits (282), Expect = 5e-024

Identities = 48/103 (46%), Positives = 76/103 (73%), Gaps = 1/103 (0%)

Frame = -1
Query: 479 LAGILGPILVVISLSEFHNYQIWKNVSPTVVYLNGLVLFTGGLLLVKFHNIWVADWTVLI 300

+A +LGP L+++++SEF N +IW +V PTVVYLNGL+ GGL+++ HN+W D+++++

Sbjct: 13 IAAVLGPTLIIVTISEFLNLRIWTDVHPTVVYLNGLLFLIGGLVIITTHNVWRLDFSLVV 72
Query: 299 TLSGWAIAIGGLLRMFFPSQKQLSKGLAN-VVLSVLFILGSFL 174

TLSGW + + G RM FP+ +QL+ GL +V++ LF+LG L

Sbjct: 73 TLSGWLLVVAGTFRMLFPTAQQLAAGLGTYIVIASLFVLGVVL 115

--------------------------

gnl|ti|818420980 name:POAA-aaa64d03.b1

mate_pair:818418726

(624 letters)

Score E


Sequences producing significant alignments: (bits) Value

gb|AAM19352.1| aldehyde dehydrogenase 2 precursor [Danio re... 53 8e-006

gb|AAH55244.1| Aldehyde dehydrogenase 2, precursor [Danio r... 53 8e-006

ref|NP_274962.1| aldehyde dehydrogenase A [Neisseria mening... 52 1e-005

emb|CAB83774.1| aldehyde dehydrogenase A [Neisseria meningi... 52 1e-005

gb|AAG09204.1| omega-crystallin; alcohol dehydrogenase [Pla... 52 1e-005

gb|AAH77908.1| MGC80785 protein [Xenopus laevis] 52 2e-005

gb|AAX28589.2| SJCHGC06755 protein [Schistosoma japonicum] 51 2e-005

gb|AAQ97741.1| mitochondrial aldehyde dehydrogenase 2 famil... 51 3e-005

ref|NP_001004907.1| MGC89020 protein [Xenopus tropicalis] >... 51 3e-005

gb|AAI07975.1| Unknown (protein for IMAGE:7256233) [Danio r... 51 3e-005

>gb|AAM19352.1| aldehyde dehydrogenase 2 precursor [Danio rerio]

Length = 516
Score = 52.8 bits (125), Expect = 8e-006

Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)

Frame = +3
Query: 426 KGDKADVDKAVAAAKIALV---SWRKKPVSLRGILINKLADLIEKHADELAE 572

+GDKADVDKAV AA+ A WR+ S RG+L+N+LAD IE+ A LAE

Sbjct: 69 EGDKADVDKAVKAARDAFKLGSPWRRMDASQRGLLLNRLADCIERDAAYLAE 120

-----------------

gnl|ti|818420985 name:POAA-aaa64d13.b1

mate_pair:818418731

(904 letters)

Score E


Sequences producing significant alignments: (bits) Value

gb|AAX26869.1| unknown [Schistosoma japonicum] 62 4e-008

gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 50 8e-005

dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 1e-004

ref|XP_453836.1| unnamed protein product [Kluyveromyces lac... 41 0.065

gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.25

gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 37 0.94

ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 2.1

gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 3.6

ref|XP_536554.2| PREDICTED: similar to myeloid/lymphoid or ... 35 4.7

>gb|AAX26869.1| unknown [Schistosoma japonicum]

Length = 102


Score = 61.6 bits (148), Expect = 4e-008

Identities = 30/43 (69%), Positives = 33/43 (76%)

Frame = +2
Query: 212 ARRNLGGRSYAVLTCKSFVKLEYRGERPIESFSSWFPPKFPSG 340

++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG

Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102

Score = 34.3 bits (77), Expect = 6.1

Identities = 14/27 (51%), Positives = 18/27 (66%)

Frame = +1


Query: 160 ACHVRSRKTTSYA*VGRSQEKSWWKVV 240

+ VR+RK +YA GRSQ K WW+ V

Sbjct: 43 SARVRTRKMVNYAWAGRSQRKLWWRSV 69

------------

gnl|ti|818418743 name:POAA-aaa64f13.g1

mate_pair:818420997

(894 letters)

Score E


Sequences producing significant alignments: (bits) Value

gb|AAX30301.1| unknown [Schistosoma japonicum] 87 8e-016

ref|XP_453849.1| unnamed protein product [Kluyveromyces lac... 86 2e-015

gb|AAX27748.1| unknown [Schistosoma japonicum] 69 3e-010

emb|CAB51041.1| putative transcription factor [Periplaneta ... 65 2e-009

dbj|BAD26579.1| cytochrome P450 like_TBP [Citrullus lanatus] 62 2e-008

pir||T02955 probable cytochrome P450 monooxygenase - maize ... 52 3e-005

dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 50 8e-005

dbj|BAD18905.1| rRNA intron-encoded endonuclease [Thermopro... 49 3e-004

dbj|BAD18906.1| rRNA intron-encoded endonuclease [Thermopro... 46 0.002

dbj|BAB33421.1| putative senescence-associated protein [Pis... 46 0.002

>gb|AAX30301.1| unknown [Schistosoma japonicum]

Length = 55
Score = 87.0 bits (214), Expect = 8e-016

Identities = 40/44 (90%), Positives = 41/44 (93%)

Frame = -3
Query: 268 LICDAHEWINEIPTVPTYYLAKPQPRERAWHN*RGKKTLLSLTL 137

LI DAHEW+NEIPTVPTYYLAKPQPRERAW N RGKKTLLSLTL

Sbjct: 5 LISDAHEWMNEIPTVPTYYLAKPQPRERAWRNQRGKKTLLSLTL 48

---------------------

gnl|ti|818420998 name:POAA-aaa64f15.b1

mate_pair:818418744

(869 letters)

Score E


Sequences producing significant alignments: (bits) Value

ref|NP_969600.1| putative phosphatase [Bdellovibrio bacteri... 67 8e-010

emb|CAD71556.1| putative phosphatase [Rhodopirellula baltic... 58 4e-007

ref|YP_130271.1| hypothetical phosphatase/phosphohexomutase... 55 2e-006

ref|NP_762487.1| Predicted phosphatase/phosphohexomutase [V... 54 5e-006

ref|NP_937132.1| CbbY family protein [Vibrio vulnificus YJ0... 54 9e-006

ref|NP_233051.1| CbbY family protein [Vibrio cholerae O1 bi... 51 6e-005

ref|ZP_00310577.1| COG0637: Predicted phosphatase/phosphohe... 51 6e-005

ref|NP_800697.1| CbbY family protein [Vibrio parahaemolytic... 50 1e-004

emb|CAI82560.1| glycoprotease family protein [Dehalococcoid... 49 2e-004

ref|ZP_00776428.1| HAD-superfamily hydrolase, subfamily IA,... 49 3e-004

>ref|NP_969600.1| putative phosphatase [Bdellovibrio bacteriovorus HD100]

emb|CAE80593.1| putative phosphatase [Bdellovibrio bacteriovorus HD100]

Length = 201


Score = 67.0 bits (162), Expect = 8e-010

Identities = 34/76 (44%), Positives = 44/76 (57%)

Frame = +1
Query: 529 PEGEFKAYLFDMDGTVADTMPLHYVAWSTAVQEAGGNFPEDLFYAWAGIPLIRTVEMLNE 708

PE FKA LFD DGTVADTMP H AW+ A+ + + + +WAG P R VEM+NE

Sbjct: 7 PEHSFKALLFDFDGTVADTMPAHLAAWNKALDKYDLSLSREQHLSWAGRPTARIVEMMNE 66
Query: 709 KFGLQNGI*NWFKERE 756

+ + KE+E


Sbjct: 67 LHQTRIDPEQFVKEKE 82

Score = 36.6 bits (83), Expect = 1.2

Identities = 16/21 (76%), Positives = 17/21 (80%)

Frame = +2


Query: 146 PEGEFKAYLFDVDGTVADTIP 208

PE FKA LFD DGTVADT+P

Sbjct: 7 PEHSFKALLFDFDGTVADTMP 27

-----------------

gnl|ti|818418766 name:POAA-aaa64j11.g1

mate_pair:818421016

(914 letters)

Score E


Sequences producing significant alignments: (bits) Value

gb|AAP52468.1| hypothetical protein LOC_Os10g10440 [Oryza s... 77 1e-012

ref|XP_638864.1| hypothetical protein DDB0185676 [Dictyoste... 77 1e-012


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