Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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9313] ref|NP_895016.1| Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Ma... [Prochlorococcus marinus str. MIT 9313] Length = 190 Score = 84.7 bits (208), Expect = 4e-015 Identities = 35/48 (72%), Positives = 44/48 (91%) Frame = +3
GVD I+C+SVNDAFVM+QW ++LG KN+F+LPDGNGEFT K+GMLV+K Sbjct: 75 GVDQIVCLSVNDAFVMFQWSKHLGTKNIFMLPDGNGEFTRKMGMLVEK 122 Score = 56.2 bits (134), Expect = 2e-006 Identities = 31/64 (48%), Positives = 36/64 (56%) Frame = +1 Query: 685 EETNKQNLTFLPE*PGFGLRSWRYSMYVGRRRREEAVHRERFSDDHGEDPFHVSDADTML 864 E T K + GFGLRSWRYSM V E+ FSD+ DPF VSDADTML Sbjct: 111 EFTRKMGMLVEKSNLGFGLRSWRYSMLVNDCNIEKMFVEPGFSDNADGDPFEVSDADTML 170
Y++
Sbjct: 171 AYMK 174 ------------------------ gnl|ti|820222368 name:POAA-aac11c06.g1 (922 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAI74690.1| hypothetical protein, conserved [Theileria ... 120 5e-026 gb|EAA22127.1| hypothetical protein [Plasmodium yoelii yoelii] 114 6e-024 ref|NP_473291.1| hypothetical protein [Plasmodium falciparu... 108 2e-022 ref|XP_737266.1| conserved hypothetical protein [Plasmodium... 108 3e-022 ref|NP_696986.1| Orf318 [Monosiga brevicollis] >gi|23344081... 34 6.3 >emb|CAI74690.1| hypothetical protein, conserved [Theileria annulata] Length = 567 Score = 120 bits (302), Expect = 5e-026 Identities = 63/126 (50%), Positives = 84/126 (66%) Frame = -2
I R+K K+ Y YVLALKRL+EI +VDISDWRF+LIV +VI++ R F G S + Sbjct: 104 IYYRHKRKKLYHYVLALKRLNEIKEVDISDWRFKLIVKKVIKRSRYFTGIFS---QQNSH 160
F+DLP VCLYLG LK +++++ HL ME YSPLQ+ I AF CR+ + +LFS Sbjct: 161 EFSDLPTVCLYLGNLKCVDAIEKVTYHLIERMEYYSPLQLGRICSAFSSCRIFNKYLFSL 220
+A F+
Sbjct: 221 VATRFI 226 Score = 114 bits (284), Expect = 6e-024 Identities = 45/91 (49%), Positives = 75/91 (82%) Frame = -3 Query: 716 LMFLQRKFGTYRFHKRIGKGNWNRYIERYDKPRTIENTQRLIFKYKASFKASKFAFAYLW 537 ++ +R F YRFHKR+GKGNWNRY+ERY KP +IENTQ + F YKAS++++K + +YLW Sbjct: 25 ILHTKRYFTHYRFHKRVGKGNWNRYVERYTKPASIENTQPIHFNYKASYQSTKNSLSYLW 84
++PK+IAA+T+++++L++W+++R + + Y+ Sbjct: 85 DLPKKIAAATSSNKLLESWIYYRHKRKKLYH 115 ----------------- gnl|ti|818424841 name:POAA-aac11c07.b1 mate_pair:820222369 (918 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAA03718.1| PP-CAT [Photobacterium damselae subsp. pisc... 72 2e-011 emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 72 3e-011 ---------- gnl|ti|820222369 name:POAA-aac11c07.g1 mate_pair:818424841 (898 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 104 5e-021 sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 89 2e-016 ref|ZP_00374729.1| conserved hypothetical protein [Wolbachi... 69 3e-010 ref|XP_625612.1| hypothetical protein cgd4_10 [Cryptosporid... 39 0.32 pir||A53577 ascites sialoglycoprotein 1 - rat (fragments) 38 0.42 gb|AAA85523.1| Heterodimeric complex composed of a mucin su... 38 0.42 ref|XP_503669.1| hypothetical protein [Yarrowia lipolytica]... 37 0.93 gb|AAD43602.1| T3P18.1 [Arabidopsis thaliana] >gi|7940282|g... 36 1.6 ref|NP_176434.1| LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2); str... 36 1.6 >gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] ref|NP_040359.1| hypothetical protein pColE1_04 [Plasmid ColE1] Length = 96
Identities = 54/65 (83%), Positives = 55/65 (84%) Frame = +2
RSFFSARNLLLANKKTTAT+G L A SRATNSFSEGNWLQQSADTKYC SSVAVV Sbjct: 2 RSFFSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLLQ 61
LCST
Sbjct: 62 ELCST 66 ----------- gnl|ti|818424857 name:POAA-aac11e06.b1 mate_pair:820222386 (907 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAF29024.1| transposase for Tn10 [Haemophilus influenzae] 240 6e-062 gb|AAN42135.1| iso-IS10R ORF [Shigella flexneri 2a str. 301... 240 6e-062 ref|NP_858217.1| iso-IS10R ORF [Shigella flexneri 2a str. 3... 240 6e-062 ------------------------------------------- gnl|ti|818424861 name:POAA-aac11e12.b1 mate_pair:820222390 (898 letters) Score E
Sequences producing significant alignments: (bits) Value gb|EAA76757.1| hypothetical protein FG06825.1 [Gibberella z... 86 1e-015 ref|XP_327700.1| hypothetical protein [Neurospora crassa] >... 86 2e-015 ref|XP_717369.1| putative DnaJ-like heat-shock protein [Can... 85 3e-015 ref|XP_717458.1| putative DnaJ-like heat-shock protein [Can... 85 3e-015 emb|CAG89658.1| unnamed protein product [Debaryomyces hanse... 85 4e-015 ref|XP_641304.1| heat shock protein [Dictyostelium discoide... 84 9e-015 gb|EAL88215.1| protein mitochondrial targeting protein (Mas... 82 3e-014 gb|AAC72887.1| heat shock protein Ddj1 [Dictyostelium disco... 81 6e-014 ref|XP_660335.1| hypothetical protein AN2731.2 [Aspergillus... 79 2e-013 gb|AAH74569.1| MGC69518 protein [Xenopus tropicalis] >gi|52... 77 6e-013 >gb|EAA76757.1| hypothetical protein FG06825.1 [Gibberella zeae PH-1] ref|XP_387001.1| hypothetical protein FG06825.1 [Gibberella zeae PH-1] Length = 417 Score = 86.3 bits (212), Expect = 1e-015 Identities = 39/55 (70%), Positives = 47/55 (85%), Gaps = 2/55 (3%) Frame = -3
+FKE+SHAYEILSDPQKR++Y+QYGE GL GGG +AED+F+QFFGGG FGG Sbjct: 47 KFKEVSHAYEILSDPQKRQVYDQYGEAGLEGGAGGGGMAAEDLFAQFFGGGGFGG 101 ---------- gnl|ti|818424868 name:POAA-aac11f12.b1 mate_pair:820222396 (883 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL31950.1| CDH1-D [Gallus gallus] 82 2e-014 ref|XP_428325.1| PREDICTED: similar to Ac1147, partial [Gal... 63 2e-008 gb|EAA17111.1| hypothetical protein [Plasmodium yoelii yoelii] 59 2e-007 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 57 6e-007 ref|XP_520857.1| PREDICTED: hypothetical protein XP_520857 ... 57 6e-007 ref|XP_358030.2| PREDICTED: similar to Ac1147 [Mus musculus] 57 1e-006 gb|EAA16550.1| hypothetical protein [Plasmodium yoelii yoelii] 54 5e-006 gb|ABA40767.1| SJCHGC01014 protein [Schistosoma japonicum] 50 1e-004 dbj|BAB66226.1| 109aa long hypothetical protein [Sulfolobus... 49 2e-004 ref|XP_578947.1| PREDICTED: similar to Ac1147 [Rattus norve... 48 5e-004 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451
Identities = 57/123 (46%), Positives = 65/123 (52%), Gaps = 1/123 (0%) Frame = -1
NDP+AGSPT TLLRLLLPL V + + V P L +PIGSSDGRCVQR Sbjct: 250 NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309
AGT+ST+ D LL IPR IIA P G PR +GT S C+ Sbjct: 310 AGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSPRT 369
QG Sbjct: 370 SQG 372 ---------------- gnl|ti|818424755 name:POAA-aac12b05.b1 (899 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_639121.1| uridine kinase [Dictyostelium discoideum] ... 60 1e-007 ref|NP_701480.1| hypothetical protein PFL0575w [Plasmodium ... 50 8e-005 ref|XP_625340.1| hypothetical protein cgd3_290 [Cryptospori... 50 1e-004 ref|XP_744033.1| conserved hypothetical protein [Plasmodium... 49 2e-004 gb|AAN37201.1| hypothetical protein PF14_0588 [Plasmodium f... 48 4e-004 ref|XP_636897.1| hypothetical protein DDB0187776 [Dictyoste... 47 7e-004 ref|NP_177538.1| ATP binding / adenylate cyclase/ kinase/ u... 46 0.002 ref|NP_704216.1| hypothetical protein [Plasmodium falciparu... 45 0.003 ref|XP_733652.1| hypothetical protein PC300711.00.0 [Plasmo... 45 0.004 ref|XP_669024.1| hypothetical protein PB101412.00.0 [Plasmo... 45 0.004 >ref|XP_639121.1| uridine kinase [Dictyostelium discoideum] gb|EAL65762.1| uridine kinase [Dictyostelium discoideum] Length = 449 Score = 59.7 bits (143), Expect = 1e-007 Identities = 26/40 (65%), Positives = 36/40 (90%) Frame = +2
+LGYQ+ AIIHRKS IFKD ++ IS+D+LEELG+T++Q+K Sbjct: 331 SLGYQMVAIIHRKSTIFKDGKIIISYDELEELGQTFVQIK 370 -------------------- gnl|ti|820222285 name:POAA-aac12b06.g1 mate_pair:818424756 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAF29024.1| transposase for Tn10 [Haemophilus influenzae] 374 e-102 -------------------- gnl|ti|820222292 name:POAA-aac12c01.g1 mate_pair:818424763 (691 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_629379.1| cysteine synthase [Dictyostelium discoideu... 69 1e-010 ref|XP_758365.1| hypothetical protein UM02218.1 [Ustilago m... 52 2e-005 gb|EAL17743.1| hypothetical protein CNBL2560 [Cryptococcus ... 51 3e-005 gb|AAW45121.1| cysteine synthase, putative [Cryptococcus ne... 51 3e-005 ref|YP_348977.1| Cysteine synthase [Pseudomonas fluorescens... 50 7e-005 ref|ZP_00577175.1| Pyridoxal-5'-phosphate-dependent enzyme,... 50 9e-005 ref|ZP_00140835.1| COG0031: Cysteine synthase [Pseudomonas ... 49 1e-004 gb|AAG03788.1| cystathionine beta-synthase [Pseudomonas aer... 49 1e-004 dbj|BAA85111.1| O-acetylserine (thiol) lyase 2 [Cyanidiosch... 49 2e-004 ref|ZP_00377440.1| cysteine synthase [Erythrobacter litoral... 48 3e-004 >ref|XP_629379.1| cysteine synthase [Dictyostelium discoideum] gb|EAL60969.1| cysteine synthase [Dictyostelium discoideum] Length = 378 Score = 68.9 bits (167), Expect = 1e-010 Identities = 34/69 (49%), Positives = 47/69 (68%) Frame = -2
++ T STGISL +LG++RGYNVQLF+PDNVS EKV L+MLGA+ +++P + F Sbjct: 103 VEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAETKIVPIVGMNNANHF 162
Y C+
Sbjct: 163 MHCAYQRCL 171 Score = 57.4 bits (137), Expect = 4e-007 Identities = 25/46 (54%), Positives = 32/46 (69%) Frame = -2 Query: 228 VVPVVGMNVPANFMHLAYQYSLDTPNTYYVNQFNNLNNFSAHYTRT 91 +VP+VGMN +FMH AYQ L +Y NQF+NL+NF+AHY T Sbjct: 150 IVPIVGMNNANHFMHCAYQRCLGDDMAFYANQFDNLSNFNAHYNGT 195 ------------------ gnl|ti|818424772 name:POAA-aac12c10.b1 mate_pair:820222301 (917 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX95427.1| DNA Helicase-related [Oryza sativa (japonica... 87 1e-015 ref|NP_989724.1| RecQ protein-like (DNA helicase Q1-like) [... 87 1e-015 ref|NP_001016316.1| hypothetical protein LOC549070 [Xenopus... 87 1e-015 gb|ABA95538.1| DNA Helicase [Oryza sativa (japonica cultiva... 87 1e-015 gb|ABA95537.1| DNA Helicase [Oryza sativa (japonica cultiva... 87 1e-015 gb|ABA95536.1| DNA Helicase [Oryza sativa (japonica cultiva... 87 1e-015 gb|ABA95535.1| DNA Helicase [Oryza sativa (japonica cultiva... 87 1e-015 ref|NP_174421.2| ATP binding / ATP-dependent helicase/ heli... 86 2e-015 gb|AAF24590.1| T19E23.16 [Arabidopsis thaliana] 86 2e-015 gb|AAI08556.1| Unknown (protein for MGC:131022) [Xenopus la... 85 4e-015 >gb|AAX95427.1| DNA Helicase-related [Oryza sativa (japonica cultivar-group)] Length = 759
Identities = 36/51 (70%), Positives = 43/51 (84%) Frame = +3
YVTPE+I KSKRF+SKL+K + G+LS I +DEAHCCSQWGHDFR DYK + Sbjct: 202 YVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNL 252 --------------------- gnl|ti|818424773 name:POAA-aac12c11.b1 mate_pair:820222302 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAZ29249.1| SRPK-like protein [Physarum polycephalum] 86 2e-015 ref|XP_668015.1| protein kinase domain [Cryptosporidium hom... 70 1e-010 ref|XP_628112.1| protein kinase CMGC group [Cryptosporidium... 70 1e-010 emb|CAE65212.1| Hypothetical protein CBG10087 [Caenorhabdit... 66 1e-009 emb|CAA79541.1| Hypothetical protein B0464.5b [Caenorhabdit... 65 3e-009 emb|CAA79540.2| Hypothetical protein B0464.5a [Caenorhabdit... 65 3e-009 emb|CAA79542.2| Hypothetical protein B0464.5c [Caenorhabdit... 65 3e-009 ref|NP_473154.1| serine/threonine protein kinase, putative ... 65 4e-009 gb|AAX80285.1| serine/arginine-rich protein specific kinase... 65 4e-009 gb|AAF99455.1| PV1H14045_P [Plasmodium vivax] 65 4e-009 >gb|AAZ29249.1| SRPK-like protein [Physarum polycephalum] Length = 426
Identities = 38/42 (90%), Positives = 38/42 (90%) Frame = +2
T K GGYHPVKVGEVYKSNYRIVKKLGWGHFSTVWLAIDE Sbjct: 35 TEDYKKGGYHPVKVGEVYKSNYRIVKKLGWGHFSTVWLAIDE 76 -------------- nl|ti|818424814 name:POAA-aac12h09.b1 (383 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_638777.1| hypothetical protein DDB0185873 [Dictyoste... 48 9e-005 ref|XP_643898.1| hypothetical protein DDB0167914 [Dictyoste... 47 2e-004 ref|XP_800651.1| PREDICTED: hypothetical protein XP_795558 ... 45 0.001 ref|NP_703476.1| hypothetical protein [Plasmodium falciparu... 44 0.001 ref|XP_646098.1| hypothetical protein DDB0190387 [Dictyoste... 44 0.002 ref|XP_797622.1| PREDICTED: similar to 3-hydroxybutyrate de... 44 0.002 ref|XP_865043.1| PREDICTED: hypothetical protein XP_859950 ... 44 0.002 ref|XP_783566.1| PREDICTED: similar to CG6066-PA [Strongylo... 44 0.002 emb|CAE70245.1| Hypothetical protein CBG16734 [Caenorhabdit... 44 0.002 ref|XP_331555.1| hypothetical protein [Neurospora crassa] >... 43 0.003 >ref|XP_638777.1| hypothetical protein DDB0185873 [Dictyostelium discoideum AX4] gb|EAL65408.1| hypothetical protein DDB0185873 [Dictyostelium discoideum] Length = 920 Score = 48.1 bits (113), Expect = 9e-005 Identities = 22/30 (73%), Positives = 23/30 (76%) Frame = -2
VPAHR E LTL+S FGID HFF TPTGI Sbjct: 538 VPAHRLEYELTLISGTFGIDGHFFTTPTGI 567 -------------- gnl|ti|820222421 name:POAA-aac13b01.g1 (896 letters) Score E
Sequences producing significant alignments: (bits) Value ref|YP_309947.1| IS1 ORF [Shigella sonnei Ss046] >gi|738550... 387 e-106 ref|NP_417902.1| IS1 protein InsB [Escherichia coli K12] >g... 342 1e-092 ref|NP_863025.1| InsBcp3 [Escherichia coli] >gi|28629340|gb... 340 4e-092 ref|NP_863037.1| InsBcp5 [Escherichia coli] >gi|28629352|gb... 340 4e-092 ref|YP_311280.1| IS1 ORF [Shigella sonnei Ss046] >gi|743128... 339 9e-092 emb|CAD09734.1| putative IS1 transposase [Salmonella enteri... 338 1e-091 ref|YP_309520.1| IS1 ORF [Shigella sonnei Ss046] >gi|738545... 338 1e-091 ref|ZP_00702652.1| COG1662: Transposase and inactivated der... 338 2e-091 emb|CAE55757.1| hypothetical protein InsB [Escherichia coli... 337 3e-091 ref|ZP_00706818.1| COG1662: Transposase and inactivated der... 337 3e-091 >ref|YP_309947.1| IS1 ORF [Shigella sonnei Ss046] gb|AAZ87712.1| IS1 ORF [Shigella sonnei Ss046] Length = 194
Identities = 187/198 (94%), Positives = 187/198 (94%) Frame = +1
AV LHRFSTRYAPENH YGHEWRWMPGN HYGRWPQHDFTSLKKLRPQSVTSRIQPGSD Sbjct: 4 AVRLHRFSTRYAPENHLYGHEWRWMPGNCTHYGRWPQHDFTSLKKLRPQSVTSRIQPGSD 63
VIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVV Sbjct: 64 VIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVV 123
IWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKV Sbjct: 124 IWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKV 183
IGHYLNIK HYQ Sbjct: 184 IGHYLNIK-------HYQ 194 ----------- gnl|ti|820222438 name:POAA-aac13d03.g1 mate_pair:818424909 (860 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAI45895.1| putative transcription factor APF1-like pro... 70 7e-011 ref|XP_642128.1| hypothetical protein DDB0218053 [Dictyoste... 66 2e-009 ref|XP_465905.1| putative mitochondrial NADH:ubiquinone oxi... 63 1e-008 gb|ABA95932.1| expressed protein [Oryza sativa (japonica cu... 62 3e-008 ref|XP_479312.1| putative transcription factor APFI [Oryza ... 61 6e-008 ref|NP_190437.1| unknown protein [Arabidopsis thaliana] >gi... 59 2e-007 gb|AAM64682.1| unknown [Arabidopsis thaliana] 59 2e-007 ref|NP_201156.1| unknown protein [Arabidopsis thaliana] >gi... 59 3e-007 gb|AAL47391.1| unknown protein [Arabidopsis thaliana] >gi|1... 59 3e-007 ref|YP_154201.1| hypothetical protein AM1088 [Anaplasma mar... 56 2e-006 >emb|CAI45895.1| putative transcription factor APF1-like protein [Acanthamoeba polyphaga] Length = 263
Identities = 52/161 (32%), Positives = 67/161 (41%) Frame = -1
+GH VT+GH C L ACTIED + GS+L GS Y+E Sbjct: 133 VGHWVTIGHRCVLKACTIEDHC-LVGMGSVLGAGS------YME---------------- 169
S S+LGAGSVL RIPSG++WVG+P Sbjct: 170 ---------------------------------SHSILGAGSVLPAWQRIPSGQIWVGNP 196
AK++R LT E + Y+ L+ H +F G YI Sbjct: 197 AKYLRDLTEEEFDFLEKSSAHYTVLSKQHAYEFYLPGHAYI 237 ------------------ name:POAA-aaa02e15.b1 mate:820216430 (910 letters) Score E Sequences producing significant alignments: (bits) Value gb|AAL35371.1| CCT chaperonin alpha subunit [Physarum polyc... 72 3e-011 ref|XP_646807.1| hypothetical protein DDB0191128 [Dictyoste... 49 2e-004 dbj|BAA32082.1| t-complex polypeptide 1 homologue [Dictyost... 49 2e-004 dbj|BAE17115.1| T-complex protein 1, alpha subunit(TCP-1-al... 49 2e-004 gb|EAA08611.2| ENSANGP00000013382 [Anopheles gambiae str. P... 49 2e-004 gb|EAN30918.1| T-complex protein 1, alpha subunit , putativ... 48 4e-004 emb|CAI75404.1| T-complex polypeptide 1, putative [Theileri... 48 5e-004 ref|XP_650632.1| T-complex protein 1 alpha subunit, putativ... 47 0.001 ref|NP_732748.1| CG5374-PB, isoform B [Drosophila melanogas... 46 0.002 gb|EAL27853.1| GA18830-PA [Drosophila pseudoobscura] 46 0.002 >gb|AAL35371.1| CCT chaperonin alpha subunit [Physarum polycephalum] Length = 546 Score = 71.6 bits (174), Expect = 3e-011 Identities = 34/36 (94%), Positives = 35/36 (97%) Frame = +2
+K KMIKFATEAAITILRIDELVTLNPKEEPGHPEH Sbjct: 511 SKVKMIKFATEAAITILRIDELVTLNPKEEPGHPEH 546
Query= gnl|ti|818408776 name:POAA-aaa02i21.b1 mate:820216454 (909 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAJ04624.1| DNA repair and recombination protein, mitoc... 54 1e-005 ref|XP_499742.1| hypothetical protein [Yarrowia lipolytica]... 52 3e-005 ref|NP_970278.1| RRM3/PIF1 helicase homolog [Bdellovibrio b... 52 3e-005 gb|AAR05217.1| predicted ATP-dependent exoDNAse alpha subun... 51 6e-005 ref|XP_790598.1| PREDICTED: similar to helentron 3 helitron... 51 6e-005 ref|XP_642006.1| hypothetical protein DDB0204299 [Dictyoste... 50 1e-004 ref|XP_629245.1| hypothetical protein DDB0191825 [Dictyoste... 50 1e-004 ref|XP_792935.1| PREDICTED: similar to helentron 5 helitron... 49 2e-004 ref|NP_001007119.1| helentron 4 helitron-like transposon re... 49 3e-004 ref|XP_649195.1| DNA repair and recombination protein, puta... 48 4e-004 >emb|CAJ04624.1| DNA repair and recombination protein, mitochondrial precursor, putative; PIF1 helicase-like protein, putative [Leishmania major] Length = 786 Score = 53.5 bits (127), Expect = 1e-005 Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%) Frame = +2
R+++ R Q+PL L +A T+H+VQG+T+P + D S AG +Y+ +SRV+ E L LT Sbjct: 631 RLSLSRRQVPLQLAWALTVHRVQGMTLPMVRLALDKSFFEAGQAYVALSRVRKAEDLSLT 690 ------------------------------------------------------------------------------ Query= gnl|ti|818408780 name:POAA-aaa02k05.b1 mate:820216458 (913 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_642004.1| hypothetical protein DDB0206234 [Dictyoste... 59 3e-007 gb|AAD21543.1| electrotransfer ubiquinone oxidoreductase [Z... 56 2e-006 gb|AAV89808.1| electrotransfer ubiquinone oxidoreductase [Z... 56 2e-006 emb|CAB84049.1| putative electron transfer flavoprotein-ubi... 54 8e-006 ref|ZP_00564964.1| Electron-transferring-flavoprotein dehyd... 54 1e-005 ref|YP_155270.1| Electron transfer flavoprotein-ubiquinone ... 50 1e-004 ref|ZP_00284897.1| COG0644: Dehydrogenases (flavoproteins) ... 49 2e-004 gb|AAG10020.1| ubiquinone oxidoreductase [Acinetobacter sp.... 49 2e-004 dbj|BAB61752.1| electron transfer flavoprotein-ubiqinone ox... 49 2e-004 ref|ZP_00283976.1| COG0644: Dehydrogenases (flavoproteins) ... 49 2e-004 >ref|XP_642004.1| hypothetical protein DDB0206234 [Dictyostelium discoideum] gb|EAL68026.1| hypothetical protein DDB0206234 [Dictyostelium discoideum] Length = 606
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 3/47 (6%) Frame = +3
Yüklə 3,49 Mb. Dostları ilə paylaş:
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