Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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FD+ + GPSGLS AIR KQLS K K+LRVCVVEKG+EVG + +S Sbjct: 57 FDVVIVGAGPSGLSTAIRLKQLSEKAGKDLRVCVVEKGSEVGSHILS 103 Score = 49.3 bits (116), Expect = 2e-004 Identities = 21/28 (75%), Positives = 27/28 (96%) Frame = +1 Query: 715 KIGSHILSGAVIEPRALNDLIPDGKEKG 798 ++GSHILSGAV++P+ALN+LIPD KEKG Sbjct: 96 EVGSHILSGAVMDPKALNELIPDWKEKG 123
Query= gnl|ti|818408785 name:POAA-aaa02k15.b1 mate:820216463 (916 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAH81588.1| Zgc:92093 [Danio rerio] >gi|52219050|ref|NP_... 59 2e-007 ref|XP_642004.1| hypothetical protein DDB0206234 [Dictyoste... 59 3e-007 gb|AAD21543.1| electrotransfer ubiquinone oxidoreductase [Z... 56 2e-006 gb|AAV89808.1| electrotransfer ubiquinone oxidoreductase [Z... 56 2e-006 gb|AAN15692.1| biotin synthase Bio B [Arabidopsis thaliana]... 55 3e-006 ref|NP_273625.1| electron transfer flavoprotein-ubiquinone ... 54 8e-006 emb|CAB84049.1| putative electron transfer flavoprotein-ubi... 54 8e-006 ref|YP_208456.1| putative electron transfer flavoprotein-ub... 52 2e-005 ref|ZP_00283976.1| COG0644: Dehydrogenases (flavoproteins) ... 49 2e-004 >gb|AAH81588.1| Zgc:92093 [Danio rerio] ref|NP_001004598.1| hypothetical protein LOC447859 [Danio rerio] Length = 617 Score = 58.9 bits (141), Expect = 2e-007 Identities = 26/43 (60%), Positives = 36/43 (83%) Frame = +2
GP+GLSAAIR KQL+N++ KELRVCVVEK +++G + +S C+ Sbjct: 77 GPAGLSAAIRLKQLANQHEKELRVCVVEKASQIGAHTLSGACL 119 -------------------------------------------------------------------------- gnl|ti|818408809 name:POAA-aaa02o19.b1 mate:820216487 (927 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 55 3e-006 gb|AAL08441.1| chloramphenicol acetyltransferase [Shigella ... 55 3e-006 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 55 3e-006 gb|AAV86079.1| chloramphenicol acetyltransferase [Shuttle v... 55 3e-006 emb|CAA71024.1| chloramphenicol acetyltransferase [unidenti... 55 3e-006 gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 55 3e-006 dbj|BAB32741.1| chloramphenicol acetyltransferase [Cloning ... 55 3e-006 gb|AAF86675.1| chloramphenicol transacetylase [Integration ... 55 3e-006 dbj|BAA03187.1| chloramphenicol acetyl transferase [synthet... 55 3e-006 gb|AAC53603.1| chloramphenicol acetyltransferase 55 3e-006 >emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromonas hydrophila] gb|AAB67677.1| choramphenicol acetyltransferase [Cloning vector pJB3Cm6] gb|AAS87172.1| chloramphenicol acetyltransferase [Achromobacter xylosoxidans] gb|AAK55328.1| chloramphenicol acetyltransferase [Cloning vector pALTER(R)*-MAX] gb|AAB39977.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Promoter vector] gb|AAB39975.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Enhancer vector] gb|AAB39973.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Control vector]
gb|AAB39971.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Basic vector]
gb|AAC53634.1| chloramphenicol acetyltransferase gb|AAC53624.1| chloramphenicol acetyltransferase gb|AAA72895.1| chloramphenicol acetyltransferase Length = 219 Score = 55.5 bits (132), Expect = 3e-006 Identities = 29/55 (52%), Positives = 32/55 (58%) Frame = -1
F PVFT G+ + G + CDGFHVGRML ELQQYCDEWQGG Sbjct: 166 FFAPVFTMGKYYTQ--GDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG 218 -------------------------------------------------------------------------- Query= gnl|ti|818408890 name:POAA-aaa03a10.b1 mate:820216569 (914 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_640980.1| hypothetical protein DDB0215252 [Dictyoste... 65 4e-009 ref|YP_255954.1| XPB/RAD25-related helicase [Sulfolobus aci... 40 0.11 ref|NP_490263.1| hypothetical protein alr7157 [Nostoc sp. P... 37 0.73 ref|YP_319972.1| Type III restriction enzyme, res subunit [... 37 0.73 ref|NP_782488.1| DNA repair helicase rad25 [Clostridium tet... 37 0.73 gb|AAG00010.1| Hypothetical protein R04E5.8a [Caenorhabditi... 37 1.2 ref|ZP_00544293.1| Helicase, C-terminal:Type III restrictio... 36 1.6 ref|NP_600785.1| putative helicase [Corynebacterium glutami... 36 2.1 emb|CAJ29724.1| gp41, helicase [Bacteriophage BFK20] 36 2.1 dbj|BAB98964.1| DNA or RNA helicases of superfamily II [Cor... 36 2.1 >ref|XP_640980.1| hypothetical protein DDB0215252 [Dictyostelium discoideum] gb|EAL66998.1| hypothetical protein DDB0215252 [Dictyostelium discoideum] Length = 528
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%) Frame = -3
++G E ITI T+++ K + + RVL+VDEVHE++ S F F Sbjct: 213 NIGRNSSDFSETGMITISTVRSTHKIP---EHVKNCRVLIVDEVHEFSGPFSEKVFQQFE 269
AY RLGFSATPFK D H H+L +F +L Sbjct: 270 NAYCRLGFSATPFKNEDPVHNHILTSIFGTQL 301 --------------------------------------------------------------------------------- Query= gnl|ti|818408907 name:POAA-aaa03c24.b1 mate:820216586 (543 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_629008.1| RNA polymerase I second largest subunit [D... 61 2e-008 gb|AAW44073.1| DNA-directed RNA polymerase i polypeptide 2,... 55 1e-006 emb|CAB66435.1| SPBP23A10.07 [Schizosaccharomyces pombe] >g... 54 3e-006 ref|XP_882102.1| PREDICTED: similar to DNA-directed RNA pol... 52 8e-006 ref|XP_592430.2| PREDICTED: similar to RNA polymerase I pol... 52 8e-006 ref|XP_881996.1| PREDICTED: similar to RNA polymerase I pol... 52 8e-006 ref|XP_881873.1| PREDICTED: similar to RNA polymerase I pol... 52 8e-006 gb|AAH73857.1| POLR1B protein [Homo sapiens] 51 2e-005 gb|AAH04882.4| POLR1B protein [Homo sapiens] 51 2e-005 gb|AAH96748.1| POLR1B protein [Homo sapiens] 51 2e-005 >ref|XP_629008.1| RNA polymerase I second largest subunit [Dictyostelium discoideum] gb|EAL60592.1| RNA polymerase I, second largest subunit [Dictyostelium discoideum] Length = 1130
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 2/54 (3%) Frame = +3
++P TMEI Y PPT G Y I+L+TT AR MRPV+ L+SG+ E IG QEQ+ Sbjct: 581 SIPKTMEISYAPPTNVENGQYSGISLFTTGARFMRPVVNLTSGQNELIGPQEQL 634
gnl|ti|818408913 name:POAA-aaa03e12.b1 mate:820216592 (910 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA14758.2| ENSANGP00000016536 [Anopheles gambiae str. P... 87 1e-015 ref|NP_610497.3| CG1884-PA, isoform A [Drosophila melanogas... 86 2e-015 ref|NP_724798.2| CG1884-PB, isoform B [Drosophila melanogas... 86 2e-015 gb|AAN71201.1| GH26494p [Drosophila melanogaster] 86 2e-015 ref|XP_395830.2| PREDICTED: similar to CCR4-NOT transcripti... 83 1e-014 emb|CAH18093.1| hypothetical protein [Homo sapiens] 82 2e-014 gb|AAH99150.1| RGD1308009_predicted protein [Rattus norvegi... 82 2e-014 ref|XP_484354.2| PREDICTED: similar to CCR4-NOT transcripti... 82 2e-014 ref|XP_613555.2| PREDICTED: similar to CCR4-NOT transcripti... 82 2e-014 ref|XP_414043.1| PREDICTED: similar to KIAA1007 protein; ad... 82 2e-014 >gb|EAA14758.2| ENSANGP00000016536 [Anopheles gambiae str. PEST] ref|XP_319808.2| ENSANGP00000016536 [Anopheles gambiae str. PEST] Length = 1796
Identities = 39/51 (76%), Positives = 44/51 (86%) Frame = +1
I HSA MDIFQ+L ++LD EGRYLFLNAIANQLRYPN+HTHYFS C+ LF Sbjct: 1662 IIHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCCILYLF 1712 ---------------------------------------------------------------------------------- gnl|ti|818408914 name:POAA-aaa03e14.b1 mate:820216593 (902 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_636906.1| hypothetical protein DDB0219311 [Dictyoste... 301 2e-080 emb|CAA16684.1| oxoglutarate dehydrogenase - like protein [... 280 5e-074 ref|NP_201376.1| oxidoreductase, acting on the aldehyde or ... 280 5e-074 emb|CAA11552.1| 2-oxoglutarate dehydrogenase, E1 subunit [A... 275 1e-072 ref|XP_479634.1| putative 2-oxoglutarate dehydrogenase, E1 ... 271 2e-071 emb|CAB75899.1| 2-oxoglutarate dehydrogenase, E1 subunit-li... 271 3e-071 gb|AAO42889.1| At3g55410 [Arabidopsis thaliana] 271 3e-071 ref|NP_191101.2| oxidoreductase, acting on the aldehyde or ... 271 3e-071 emb|CAA20299.1| SPBC3H7.03c [Schizosaccharomyces pombe] >gi... 258 3e-067 ref|XP_760599.1| hypothetical protein UM04452.1 [Ustilago m... 258 3e-067 >ref|XP_636906.1| hypothetical protein DDB0219311 [Dictyostelium discoideum] gb|EAL63408.1| hypothetical protein DDB0219311 [Dictyostelium discoideum] Length = 1013
Identities = 154/263 (58%), Positives = 189/263 (71%), Gaps = 5/263 (1%) Frame = -1
G + DQP FTQPIMY K P ++KYS++LI+E+ +T E+Y M I ++ ++ Sbjct: 504 GHNETDQPKFTQPIMYDKIGKQQPIIEKYSNKLIAEKVITQEQYLQMKNIIHESYEKGYQ 563
G K + + L+S WEGFK+P +L G+TGI Q+ L +GKVL T P GF H +I Sbjct: 564 DGMKHVPNAEDWLESRWEGFKSPIELGNPGRTGIDQDLLQKIGKVLYTEPSGFEVHSTIK 623
++LK+K MF+ T D+ATAEALAFGSLLL+GNHVRLSGQDVERGTFSHRH+V HD Sbjct: 624 RLLKEKKDMFDKGTGFDWATAEALAFGSLLLDGNHVRLSGQDVERGTFSHRHAVWHDQKT 683
TY PL+ ++ D F +NSSLSEFAVLGFELGYSLENP +LILWEAQFGDF+ Sbjct: 684 DQTYAPLTKLATALGKKDAAEFVASNSSLSEFAVLGFELGYSLENPDALILWEAQFGDFS 743
NGAQVIIDQFISSGE KWMRQSG Sbjct: 744 NGAQVIIDQFISSGEQKWMRQSG 766 --------------------------------------------------------------------------------- gnl|ti|818408948 name:POAA-aaa03k18.b1 mate:820216626 (363 letters) Score E
Sequences producing significant alignments: (bits) Value ref|YP_172723.1| probable phosphoketolase 1 [Synechococcus ... 49 5e-005 gb|AAQ64626.1| xylulose 5-phosphate phosphoketolase [Lactob... 49 7e-005 ref|YP_193510.1| xylulose-5-phosphate-fructose phosphoketol... 48 9e-005 gb|AAW43553.1| phosphoketolase, putative [Cryptococcus neof... 48 9e-005 ref|NP_786060.1| phosphoketolase [Lactobacillus plantarum W... 48 9e-005 emb|CAC84393.1| phosphoketolase [Lactobacillus pentosus] >g... 48 9e-005 ref|ZP_00564326.1| Fructose-6-phosphate phosphoketolase [Me... 47 2e-004 ref|YP_314589.1| fructose-6-phosphate phosphoketolase [Thio... 47 3e-004 ref|ZP_00333774.1| COG3957: Phosphoketolase [Thiobacillus d... 47 3e-004 ref|ZP_00063803.1| COG3957: Phosphoketolase [Leuconostoc me... 46 3e-004 >ref|YP_172723.1| probable phosphoketolase 1 [Synechococcus elongatus PCC 6301] dbj|BAD80203.1| probable phosphoketolase 1 [Synechococcus elongatus PCC 6301] ref|ZP_00165090.2| COG3957: Phosphoketolase [Synechococcus elongatus PCC 7942] sp|Q5N0G7|PHK_SYNP6 Probable phosphoketolase Length = 796 Score = 48.9 bits (115), Expect = 5e-005 Identities = 20/36 (55%), Positives = 29/36 (80%) Frame = -1
+++ EV+R NPDNFR F PDE +SN+LD+V E+T + Sbjct: 407 QFLREVIRHNPDNFRLFGPDETASNRLDAVYEVTSK 442 -------------------------------------------------------------------------------------- gnl|ti|818408989 name:POAA-aaa04d13.b1 mate:820216665 (909 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_474361.1| OSJNBb0017I01.2 [Oryza sativa (japonica cu... 103 8e-021 ref|NP_001031431.1| unknown protein [Arabidopsis thaliana] ... 99 2e-019 ref|NP_001030882.1| unknown protein [Arabidopsis thaliana] ... 98 3e-019 gb|AAH74020.1| Pigl protein [Rattus norvegicus] >gi|2030209... 98 3e-019 ref|XP_504249.1| hypothetical protein [Yarrowia lipolytica]... 98 5e-019 ref|NP_565647.2| unknown protein [Arabidopsis thaliana] 97 8e-019 ref|NP_950191.1| phosphatidylinositol glycan, class L [Mus ... 96 2e-018 emb|CAI24686.1| ortholog of human and rat phosphatidylinosi... 96 2e-018 ref|XP_583634.2| PREDICTED: similar to N-acetylglucosaminyl... 94 7e-018 emb|CAC21467.1| SPAPB2B4.01c [Schizosaccharomyces pombe] >g... 93 1e-017 >ref|XP_474361.1| OSJNBb0017I01.2 [Oryza sativa (japonica cultivar-group)] emb|CAE05722.1| OSJNBb0017I01.2 [Oryza sativa (japonica cultivar-group)] Length = 262 Score = 103 bits (257), Expect = 8e-021 Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 1/100 (1%) Frame = +1
L V+AHPDDE+MFFAPTIL + K +H++CLS GN DGLG +R++ELY +C L IP Sbjct: 52 LLVLAHPDDESMFFAPTILFLKSKGHSIHILCLSQGNADGLGNIRKEELYLACVTLKIPA 111
+V++ D ELQDG +WD ++ ++ + + I+T+ Sbjct: 112 EQVKVLDHSELQDGFHKNWDHGLIAELTLAQSQLWNIDTI 151
gnl|ti|818409006 name:POAA-aaa04h05.b1 mate:820216678 (258 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABA64469.1| DNA-dependent RNA polymerase II largest subu... 58 1e-007 gb|ABA64471.1| DNA-dependent RNA polymerase II largest subu... 56 5e-007 gb|ABA64470.1| DNA-dependent RNA polymerase II largest subu... 56 5e-007 gb|AAC18417.1| RNA polymerase II largest subunit [Acanthamo... 55 1e-006 gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia ... 54 1e-006 gb|AAQ08512.1| RNA polymerase II largest subunit [Cycas rev... 54 1e-006 gb|AAQ08511.1| RNA polymerase II largest subunit [Zamia mur... 54 1e-006 gb|AAC14137.1| RNA polymerase II largest subunit [Dictyoste... 54 2e-006 ref|XP_641735.1| RNA polymerase II core subunit [Dictyostel... 54 2e-006 gb|AAQ08519.1| RNA polymerase II largest subunit [Psilotum ... 53 3e-006 >gb|ABA64469.1| DNA-dependent RNA polymerase II largest subunit [Glaucocystis nostochinearum] Length = 1852 Score = 57.8 bits (138), Expect = 1e-007 Identities = 23/36 (63%), Positives = 31/36 (86%) Frame = -3
S ++V I KR+SDEDCR++GL PEWARPDWM++T+ Sbjct: 209 SAEKVHQIFKRISDEDCRSMGLRPEWARPDWMIVTI 244 -------------------------------------------------------------------------- gnl|ti|818409007 name:POAA-aaa04h07.b1 mate:820216679 (803 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes g... 60 8e-008 dbj|BAC02706.2| KIAA1997 protein [Homo sapiens] 60 8e-008 emb|CAD98012.1| hypothetical protein [Homo sapiens] 60 8e-008 ref|XP_508727.1| PREDICTED: similar to dynein, cytoplasmic,... 60 8e-008 ref|XP_370652.3| PREDICTED: dynein, cytoplasmic, heavy poly... 60 8e-008 ref|XP_690560.1| PREDICTED: similar to dynein heavy chain i... 59 2e-007 ref|NP_084127.2| dynein, cytoplasmic, heavy chain 2 [Mus mu... 58 3e-007 ref|XP_863187.1| PREDICTED: similar to dynein, cytoplasmic,... 58 3e-007 ref|XP_589775.2| PREDICTED: similar to dynein, cytoplasmic,... 57 6e-007 ref|XP_417173.1| PREDICTED: similar to dynein, cytoplasmic,... 55 3e-006 >gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes gratilla] Length = 4318
Identities = 27/49 (55%), Positives = 37/49 (75%) Frame = -2
R+ L FKNDLK+ +Q AGV G +VL+LEDHQ ++P F+E +NSLL+ Sbjct: 2689 RAYGLKQFKNDLKTAMQQAGVEGNQVVLLLEDHQFIQPQFLELINSLLS 2737
gnl|ti|818409014 name:POAA-aaa04h21.b1 mate:820216686 (841 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_780099.1| PREDICTED: similar to protein phosphatase ... 59 2e-007 ref|XP_796255.1| PREDICTED: similar to predicted CDS, rever... 59 3e-007 ref|XP_792610.1| PREDICTED: similar to predicted CDS, endon... 59 3e-007 ref|XP_788888.1| PREDICTED: similar to predicted CDS, endon... 57 8e-007 ref|XP_783384.1| PREDICTED: similar to predicted CDS, endon... 57 1e-006 ref|XP_785177.1| PREDICTED: similar to endonuclease/exonucl... 55 2e-006 ref|XP_793350.1| PREDICTED: similar to predicted CDS, rever... 50 1e-004 ref|XP_788695.1| PREDICTED: similar to predicted CDS, rever... 49 2e-004 ref|XP_791680.1| PREDICTED: similar to predicted CDS, endon... 49 2e-004 gb|AAB26437.2| reverse transcriptase homolog [Chironomus th... 48 4e-004 >ref|XP_780099.1| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) subunit 8 [Strongylocentrotus purpuratus] Length = 1021 Score = 59.3 bits (142), Expect = 2e-007 Identities = 27/80 (33%), Positives = 44/80 (55%) Frame = -3
I D + + ++Q ++ A GPD +PN+ +K +E + +L L + +PE W Sbjct: 254 IVDTEGVRKLLQNINTSKAIGPDQVPNQALKLAA--DEIAPVLQHLFQQSLDLGDLPEDW 311
+K+NI IYKKG +P NY Sbjct: 312 RKANITPIYKKGPTTNPANY 331 ---------------------------------------------------------------------------- gnl|ti|818409020 name:POAA-aaa04j15.b1 mate:820216693 (642 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_578492.1| PREDICTED: similar to ribosomal protein S2... 68 2e-010 ref|XP_520395.1| PREDICTED: similar to Ehmt1 protein [Pan t... 37 0.50 ref|NP_013703.1| Protein that forms a complex with Spt4p an... 34 3.3 ref|XP_528006.1| PREDICTED: similar to putative protein [Pa... 33 5.6 gb|AAH66462.1| Zgc:56409 protein [Danio rerio] 33 7.3 gb|AAH74125.1| MGC81822 protein [Xenopus laevis] 33 9.5 >ref|XP_578492.1| PREDICTED: similar to ribosomal protein S23 [Rattus norvegicus] Length = 1141
Identities = 23/39 (58%), Positives = 30/39 (76%) Frame = -3
+WG CG + GQ+W C A+VGQ+WG CG +VGQ+WG CG Sbjct: 58 LWGSCGAAVGQLWDSCEAAVGQLWGSCGAAVGQLWGSCG 96 Score = 65.5 bits (158), Expect = 1e-009 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = -3 Query: 142 VWGECGVSAGQVWGKCGASVGQVWGECGVSVGQVWGKCG 26 +W CG + GQ+WG CGA+VGQ+W C +VGQ+WG CG Sbjct: 47 LWDSCGAAVGQLWGSCGAAVGQLWDSCEAAVGQLWGSCG 85 Score = 57.8 bits (138), Expect = 3e-007 Identities = 23/40 (57%), Positives = 31/40 (77%) Frame = -2 Query: 143 SVG*VWGECRASVGQVRGKCGASVG*VWGECGASVGQVWG 24 +VG +WG C A+VGQ+ C A+VG +WG CGA+VGQ+WG Sbjct: 54 AVGQLWGSCGAAVGQLWDSCEAAVGQLWGSCGAAVGQLWG 93 Score = 55.5 bits (132), Expect = 1e-006 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = -1 Query: 147 NECGVSVG*VQGKCGASAGQVWGKCGVSVG*VWGKCGASVG 25 + CG +VG + G CGA+ GQ+W C +VG +WG CGA+VG Sbjct: 49 DSCGAAVGQLWGSCGAAVGQLWDSCEAAVGQLWGSCGAAVG 89
gnl|ti|818409026 name:POAA-aaa04l03.b1 (873 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAC53603.1| chloramphenicol acetyltransferase 397 e-109 gb|AAV86079.1| chloramphenicol acetyltransferase [Shuttle v... 396 e-109 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 395 e-109 dbj|BAA03718.1| PP-CAT [Photobacterium damselae subsp. pisc... 395 e-108 emb|CAA71024.1| chloramphenicol acetyltransferase [unidenti... 394 e-108 emb|CAA67774.1| cat [Escherichia coli] 394 e-108 emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 393 e-108 emb|CAE51636.1| chloramphenicol acetyltransferase [Serratia... 393 e-108 gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 393 e-108 dbj|BAA03187.1| chloramphenicol acetyl transferase [synthet... 392 e-108 >gb|AAC53603.1| chloramphenicol acetyltransferase Length = 220
Identities = 196/223 (87%), Positives = 198/223 (88%) Frame = -1
M EK TGYTTV I H K F F +AQ + VQLDI LKTVKKNKHKFY Sbjct: 1 MHEKKITGYTTV-DISQWHRKEHFEA-FQSVAQC-TYNQTVQLDITAFLKTVKKNKHKFY 57
PAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQF Sbjct: 58 PAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQF 117
LHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKY Sbjct: 118 LHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKY 177
YTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA Sbjct: 178 YTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA 220 ------------------------------------------------------------------------------ gnl|ti|818409034 name:POAA-aaa04l21.b1 mate:820216706 (719 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_626786.1| type I fatty acid synthase [Cryptosporidiu... 54 5e-006 gb|AAC99407.1| type I fatty acid synthase [Cryptosporidium ... 54 5e-006 ref|ZP_00495139.1| COG3321: Polyketide synthase modules and... 51 3e-005 ref|ZP_00489486.1| COG3321: Polyketide synthase modules and... 51 3e-005 ref|YP_111183.1| putative non-ribosomal peptide synthase/po... 51 3e-005 ref|NP_856601.1| PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETI... 51 3e-005 ref|NP_217447.1| PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETI... 51 3e-005 ref|YP_335295.1| polyketide synthase [Burkholderia pseudoma... 51 3e-005 ref|ZP_00770598.1| COG3321: Polyketide synthase modules and... 51 3e-005 Yüklə 3,49 Mb. Dostları ilə paylaş:
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