Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|ZP_00663038.1| Beta-ketoacyl synthase [Syntrophomonas w... 51 3e-005 >ref|XP_626786.1| type I fatty acid synthase [Cryptosporidium parvum] gb|EAK89089.1| type I fatty acid synthase [Cryptosporidium parvum] Length = 8243
Identities = 22/34 (64%), Positives = 28/34 (82%) Frame = +3
AG+ PN++ Y+EAHGTGT LGD +E ALKS+FS Sbjct: 1178 AGIRPNDIGYIEAHGTGTSLGDPIEVSALKSIFS 1211 ------------------------------------------------------------------ gnl|ti|818409037 name:POAA-aaa04n03.b1 mate:820216709 (862 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_446279.1| unnamed protein product [Candida glabrata]... 132 2e-029 emb|CAG84696.1| unnamed protein product [Debaryomyces hanse... 132 2e-029 ref|NP_011395.1| RNA helicase in the DEAH-box family, invol... 132 2e-029 ref|XP_451555.1| unnamed protein product [Kluyveromyces lac... 130 4e-029 ref|XP_721764.1| putative spliceosomal RNA helicase [Candid... 130 6e-029 emb|CAA17908.1| SPBC16H5.10c [Schizosaccharomyces pombe] >g... 130 6e-029 ref|XP_657737.1| hypothetical protein AN0133.2 [Aspergillus... 129 1e-028 gb|EAA75014.1| conserved hypothetical protein [Gibberella z... 129 2e-028 ref|NP_191790.1| ATP binding / ATP-dependent helicase/ RNA ... 128 3e-028 ref|NP_182247.1| ATP binding / ATP-dependent helicase/ RNA ... 128 3e-028 >ref|XP_446279.1| unnamed protein product [Candida glabrata] emb|CAG59203.1| unnamed protein product [Candida glabrata CBS138] Length = 768 Score = 132 bits (332), Expect = 2e-029 Identities = 63/71 (88%), Positives = 69/71 (97%) Frame = -2
+IAETS+TIDGIVYV+DPGFSKQKVYNPRIR+ESL+VSPISKA A QRAGRAGRTRPGKC Sbjct: 380 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKC 439
FRLYTE+AFQK Sbjct: 440 FRLYTEEAFQK 450
(530 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_641443.1| putative p53-related/BUD32 family kinase [... 63 4e-009 ref|XP_783429.1| PREDICTED: similar to TP53 regulating kina... 51 2e-005 ref|NP_921531.1| putative endopeptidase [Oryza sativa (japo... 50 4e-005 gb|ABB47633.1| expressed protein [Oryza sativa (japonica cu... 50 4e-005 gb|AAH66309.1| P53-related protein kinase [Homo sapiens] 48 2e-004 emb|CAJ30016.1| TP53 regulating kinase [Homo sapiens] >gi|9... 48 2e-004 ref|XP_514697.1| PREDICTED: hypothetical protein XP_514697 ... 48 2e-004 ref|XP_853966.1| PREDICTED: similar to TP53 regulating kina... 48 2e-004 gb|AAQ02436.1| chromosome 20 open reading frame 64 [synthet... 48 2e-004 dbj|BAB62041.1| PRPK mutant1 [Homo sapiens] 48 2e-004 >ref|XP_641443.1| putative p53-related/BUD32 family kinase [Dictyostelium discoideum] gb|EAL67460.1| putative protein serine/threonine kinase [Dictyostelium discoideum] Length = 252 Score = 63.2 bits (152), Expect = 4e-009 Identities = 31/87 (35%), Positives = 47/87 (54%) Frame = +2
+LDQK+S KR++Q E + + +C+K G+ PS+Y VD NR Sbjct: 73 ILDQKISSKRILQ--------------------EVRSLNKCKKKGIQVPSLYLVDIGNNR 112
+Y+EFI G TVK +LY N ++N+ Sbjct: 113 IYMEFIKGETVKHYLYKNQESTQHQNQ 139 ------------------------------------------------------------------------- gnl|ti|818409062 name:POAA-aaa15a12.g1 mate:818409375 (799 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_636020.1| hypothetical protein DDB0188593 [Dictyoste... 74 6e-012 ref|XP_701211.1| PREDICTED: similar to SH3 and multiple ank... 36 1.7 ref|NP_065254.2| bromodomain containing 4 isoform 1 [Mus mu... 35 2.2 dbj|BAE27987.1| unnamed protein product [Mus musculus] 35 2.2 ref|XP_343176.2| PREDICTED: similar to R31546_1 [Rattus nor... 35 2.2 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 2.9 ref|ZP_00054660.1| COG2853: Surface lipoprotein [Magnetospi... 35 3.8 ref|NP_005426.2| rho guanine nucleotide exchange factor 5 i... 34 5.0 ref|NP_001002861.1| rho guanine nucleotide exchange factor ... 34 5.0 ref|XP_496933.1| PREDICTED: similar to FLJ00261 protein [Ho... 34 5.0 >ref|XP_636020.1| hypothetical protein DDB0188593 [Dictyostelium discoideum] gb|EAL62515.1| hypothetical protein DDB0188593 [Dictyostelium discoideum] Length = 4590 Score = 73.9 bits (180), Expect = 6e-012 Identities = 35/48 (72%), Positives = 38/48 (79%) Frame = +1
P + R R+FVEK FQLSPTLNVLG+FTPKITTVFGWLGIKDI Sbjct: 4436 PNTKTRKDLKTGRIFVEKKFQLSPTLNVLGEFTPKITTVFGWLGIKDI 4483 --------------------------------------------------------------------------------- gnl|ti|818409212 name:POAA-aaa16b09.g1 mate:818409517 (596 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAI27945.1| NADH-quinone oxidoreductase chain F [Ehrlic... 60 4e-008 ref|YP_180345.1| NADH-quinone oxidoreductase chain F [Ehrli... 60 4e-008 emb|CAI26997.1| NADH-quinone oxidoreductase chain F [Ehrlic... 60 4e-008 gb|AAB03672.1| QinA 59 8e-008 ref|XP_636489.1| ubiquinone oxidoreductase [Dictyostelium d... 59 8e-008 emb|CAA90435.1| Hypothetical protein C09H10.3 [Caenorhabdit... 59 1e-007 gb|AAM65274.1| NADH dehydrogenase [Arabidopsis thaliana] 59 1e-007 ref|NP_910779.1| putative NADH dehydrogenase [Oryza sativa ... 59 1e-007 ref|NP_196470.1| FMN binding / NADH dehydrogenase (ubiquino... 59 1e-007 emb|CAE59572.1| Hypothetical protein CBG02970 [Caenorhabdit... 59 1e-007 >emb|CAI27945.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str. Gardel] ref|YP_196419.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str. Gardel] Length = 425 Score = 60.5 bits (145), Expect = 4e-008 Identities = 26/32 (81%), Positives = 29/32 (90%) Frame = +1
D++ +SYQIEGHTICALGDAAAWPVQGLI H Sbjct: 378 DLLLSISYQIEGHTICALGDAAAWPVQGLIRH 409 -------------------------------------------------------------------- gnl|ti|818409221 name:POAA-aaa16d09.g1 mate:818409525 (906 letters) Score E
Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pis... 68 5e-010 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 67 8e-010 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 61 5e-008 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 55 4e-006 gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005 ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.005 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.005 gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282
Identities = 31/35 (88%), Positives = 33/35 (94%) Frame = +3
NNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS Sbjct: 80 NNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114 Score = 37.7 bits (86), Expect = 0.55 Identities = 23/44 (52%), Positives = 24/44 (54%) Frame = +1 Query: 199 NHWFLSY*SDLLSGHTAAPKRLLVVK*EGKTNLSHDGLNPAHVP 330 N FLSY +LL H GKTNLSHDGL PAHVP --------------------------------------------------------------------------------- gnl|ti|818408824 name:POAA-aaa05d12.b1 mate_pair:820216503 (717 letters) Score E
Sequences producing significant alignments: (bits) Value gb|EAA69375.1| hypothetical protein FG00036.1 [Gibberella z... 112 1e-023 emb|CAG85392.1| unnamed protein product [Debaryomyces hanse... 110 4e-023 gb|EAA74017.1| conserved hypothetical protein [Gibberella z... 109 8e-023 emb|CAB11481.1| lsd1 [Schizosaccharomyces pombe] >gi|191147... 109 8e-023 dbj|BAB62032.1| fatty acid synthase alpha-subunit [Schizosa... 109 8e-023 dbj|BAB62031.1| fatty acid synthase alpha-subunit [Schizosa... 109 8e-023 dbj|BAB62030.1| fatty acid synthase alpha-subunit [Schizosa... 109 8e-023 dbj|BAA11913.1| fatty acid synthetase alpha subunit [Schizo... 109 8e-023 ref|XP_452914.1| unnamed protein product [Kluyveromyces lac... 109 1e-022 ref|XP_327594.1| hypothetical protein [Neurospora crassa] >... 109 1e-022 >gb|EAA69375.1| hypothetical protein FG00036.1 [Gibberella zeae PH-1] ref|XP_380212.1| hypothetical protein FG00036.1 [Gibberella zeae PH-1] Length = 1598
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 1/89 (1%) Frame = -3
S++ AN L FP LP D + L + ++DL+RT+VI G+ EVGPWGN RTRWEME Sbjct: 846 SSVSPMANLKLNFPQLPDYEDDISPLNTLSGMVDLDRTVVITGISEVGPWGNSRTRWEME 905
AFGEFSLEGCIEMAW+M LI ++NG L D Sbjct: 906 AFGEFSLEGCIEMAWIMGLITHYNGKLGD 934 -------------------------- gnl|ti|820216503 name:POAA-aaa05d12.g1 mate_pair:818408824 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAL86700.1| fatty acid synthase alpha subunit, putative ... 63 2e-008 gb|EAA74017.1| conserved hypothetical protein [Gibberella z... 63 2e-008 emb|CAB11481.1| lsd1 [Schizosaccharomyces pombe] >gi|191147... 62 2e-008 dbj|BAB62032.1| fatty acid synthase alpha-subunit [Schizosa... 62 2e-008 dbj|BAB62031.1| fatty acid synthase alpha-subunit [Schizosa... 62 2e-008 dbj|BAB62030.1| fatty acid synthase alpha-subunit [Schizosa... 62 2e-008 dbj|BAA11913.1| fatty acid synthetase alpha subunit [Schizo... 62 3e-008 sp|P15368|FAS2_PENPA Fatty acid synthase alpha subunit [Inc... 61 5e-008 ref|XP_452914.1| unnamed protein product [Kluyveromyces lac... 61 6e-008 ref|XP_327594.1| hypothetical protein [Neurospora crassa] >... 60 8e-008 >gb|EAL86700.1| fatty acid synthase alpha subunit, putative [Aspergillus fumigatus Af293]
ref|XP_748738.1| fatty acid synthase subunit alpha [Aspergillus fumigatus Af293] Length = 1857 Score = 62.8 bits (151), Expect = 2e-008 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 8/132 (6%) Frame = +1
G+ P FD K R +DS WNWARQ+A ++YYD + + + + ++NRS P +L Sbjct: 381 GIEPAFDSLKARVYDSSWNWARQDALSMYYDIIFGRLKVVDREIVSQCIRIMNRSNPLLL 440
D +++ ID ++LA + L + P Y+ ++ +PT P Sbjct: 441 DFMQY-----HIDNCPTERGETYQLAKELGQQLIENCKEVLGVAPVYKDVA-IPTGPQTT 494
I G I Y EV Sbjct: 495 IDARGNIAYKEV 506 --------------------------- gnl|ti|818408840 name:POAA-aaa05h06.b1 mate_pair:820216520 (504 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAC55274.1| hypothetical peroxisomal multifunctional en... 59 9e-008 ref|XP_642412.1| hypothetical protein DDB0214811 [Dictyoste... 59 9e-008 ref|XP_503980.1| hypothetical protein [Yarrowia lipolytica]... 52 6e-006 ref|XP_369316.1| hypothetical protein MG06148.4 [Magnaporth... 52 1e-005 emb|CAA56355.1| multifunctional beta-oxidation protein [Neu... 51 1e-005 gb|EAL84539.1| peroxisomal multifunctional beta-oxidation p... 49 9e-005 gb|EAA76166.1| FOX2_NEUCR Peroxisomal hydratase-dehydrogena... 48 1e-004 ref|XP_664715.1| hypothetical protein AN7111.2 [Aspergillus... 47 2e-004 emb|CAG09600.1| unnamed protein product [Tetraodon nigrovir... 43 0.004 ref|NP_990274.1| hydroxysteroid (17-beta) dehydrogenase 4 [... 42 0.011 >dbj|BAC55274.1| hypothetical peroxisomal multifunctional enzyme 2 [Dictyostelium discoideum] Length = 215
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Frame = +1
+ NL+ KG+GALL + T + S+GK I N S FIRGIGGFGGDRGP E +IP Sbjct: 28 ITNLYDKGKGALLILQCITSEKSSGKPIFKNIFSFFIRGIGGFGGDRGPNEKPIQIPKDR 87
P + S+
Sbjct: 88 APDAISK 94 ----------------------------- gnl|ti|820216522 name:POAA-aaa05h10.g1 mate_pair:818408842 (909 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00108492.1| COG1012: NAD-dependent aldehyde dehydrog... 61 6e-008 gb|AAN63391.1| Aldehyde dehydrogenase protein 1, isoform b ... 60 1e-007 gb|AAA20615.3| Aldehyde dehydrogenase protein 1, isoform a ... 60 1e-007 emb|CAE75088.1| Hypothetical protein CBG23008 [Caenorhabdit... 60 1e-007 ref|ZP_00518574.1| Aldehyde dehydrogenase (NAD+) [Crocospha... 59 2e-007 gb|AAC78174.2| Aldehyde dehydrogenase protein 2 [Caenorhabd... 59 2e-007 ref|ZP_00672669.1| Aldehyde dehydrogenase (NAD+) [Trichodes... 59 3e-007 sp|Q29491|ALDH2_MACPR Aldehyde dehydrogenase, cytosolic 2 (... 57 1e-006 gb|AAH67563.1| Zgc:85659 [Danio rerio] 56 2e-006 emb|CAF94009.1| unnamed protein product [Tetraodon nigrovir... 56 2e-006 >ref|ZP_00108492.1| COG1012: NAD-dependent aldehyde dehydrogenases [Nostoc punctiforme PCC 73102] Length = 64
Identities = 27/33 (81%), Positives = 30/33 (90%) Frame = -2
APFGGFKQSGIGR+LGEYG+ QY EVKTV IK+ Sbjct: 32 APFGGFKQSGIGRELGEYGLQQYTEVKTVTIKL 64 -------------------------- gnl|ti|820216553 name:POAA-aaa05n16.g1 mate_pair:818408875 (869 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 52 3e-005 gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] 52 3e-005 emb|CAB75469.1| copia-type reverse transcriptase-like prote... 50 1e-004 gb|AAG60117.1| copia-type polyprotein, putative [Arabidopsi... 50 1e-004 gb|AAG50765.1| copia-type polyprotein, putative [Arabidopsi... 50 1e-004 gb|AAF16534.1| T26F17.17 [Arabidopsis thaliana] 50 1e-004 gb|AAR99086.1| SD14423p [Drosophila melanogaster] >gi|13124... 50 1e-004 dbj|BAA01703.1| ORF [Drosophila simulans] 50 1e-004 emb|CAA69273.1| lectin receptor kinase [Arabidopsis thaliana] 50 1e-004 gb|AAZ28937.1| polyprotein [Phanerochaete chrysosporium RP-78] 46 0.002 ----------------- gnl|ti|818408879 name:POAA-aaa05p02.b1 mate_pair:820216558 (835 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAF79683.1| F9C16.17 [Arabidopsis thaliana] 55 2e-006 gb|ABA91945.1| retrotransposon protein, putative, Ty1-copia... 54 8e-006 ref|XP_470653.1| Putative gag-pol polyprotein [Oryza sativa... 53 1e-005 ref|XP_473703.1| OSJNBb0016D16.22 [Oryza sativa (japonica c... 52 2e-005 gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa (... 52 2e-005 ref|XP_472606.1| OJ000114_01.9 [Oryza sativa (japonica cult... 52 2e-005 gb|AAP55058.1| retrotransposon protein, putative, Ty1-copia... 52 2e-005 gb|AAP55047.1| retrotransposon protein, putative, unclassif... 52 2e-005 gb|ABA96076.1| retrotransposon protein, putative, unclassif... 52 2e-005 ref|NP_912974.1| unnamed protein product [Oryza sativa (jap... 52 2e-005 ------- gnl|ti|820216565 name:POAA-aaa05p18.g1 mate_pair:818408886 (713 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAL30822.1| histone H1 [Physarum polycephalum] 289 7e-077 gb|AAQ73927.1| erythrocyte membrane protein 1 [Plasmodium f... 89 2e-016 ref|YP_293890.1| putative membrane protein [Emiliania huxle... 86 9e-016 emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [V... 86 2e-015 emb|CAA56946.1| Chitinase [Beta vulgaris subsp. vulgaris] >... 85 2e-015 gb|ABA41399.1| pherophorin-C1 protein precursor [Chlamydomo... 84 6e-015 ref|XP_479713.1| putative pherophorin-dz1 protein [Oryza sa... 82 2e-014 ref|YP_293958.1| putative membrane protein [Emiliania huxle... 82 2e-014 gb|ABA41400.1| pherophorin-C2 protein precursor [Chlamydomo... 80 6e-014 emb|CAC39318.1| VMP3 protein [Volvox carteri f. nagariensis] 79 1e-013 >gb|AAL30822.1| histone H1 [Physarum polycephalum] Length = 155 Score = 289 bits (739), Expect = 7e-077 Identities = 150/152 (98%), Positives = 150/152 (98%) Frame = +2
ARAPAKATRSPSKRTSTKKAAPKKAAPAKKAAPKRKSPSSSPKKAAPKKAPATKKTTTTK Sbjct: 1 ARAPAKATRSPSKRTSTKKAAPKKAAPAKKAAPKRKSPSSSPKKAAPKKAPATKKTTTTK 60
KVAAGKKSTSKKTSTHKSHSPTATAIIQAIVAQKARGGVSRQAIIKHVLAHHKDFTETHV Sbjct: 61 KVAAGKKSTSKKTSTHKSHSPTATAIIQAIVAQKARGGVSRQAIIKHVLAHHKDFTETHV 120
KSAI LMEREHETIAR EGKQSFTISAKGKKS Sbjct: 121 KSAIKLMEREHETIARKEGKQSFTISAKGKKS 152 ------------------------- gnl|ti|818409597 name:POAA-aaa14c01.b1 mate_pair:818409300 (908 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL31950.1| CDH1-D [Gallus gallus] 80 7e-014 gb|EAA17111.1| hypothetical protein [Plasmodium yoelii yoelii] 57 9e-007 gb|EAA16550.1| hypothetical protein [Plasmodium yoelii yoelii] 54 6e-006 ref|XP_428325.1| PREDICTED: similar to Ac1147, partial [Gal... 52 2e-005 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 47 0.001 ref|XP_520857.1| PREDICTED: hypothetical protein XP_520857 ... 47 0.001 gb|ABA40767.1| SJCHGC01014 protein [Schistosoma japonicum] 47 0.001 ref|XP_358030.2| PREDICTED: similar to Ac1147 [Mus musculus] 46 0.002 emb|CAJ30044.1| hypothetical protein [Magnetospirillum gryp... 45 0.003 dbj|BAB66226.1| 109aa long hypothetical protein [Sulfolobus... 42 0.029 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451 Score = 80.5 bits (197), Expect = 7e-014 Identities = 48/86 (55%), Positives = 54/86 (62%) Frame = -2
NDP+AGSPT TLLRLLLPL V + + V P L +PIGSSDGRCVQR Sbjct: 250 NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309
AGT+ST+ D LL IPR IIA P Sbjct: 310 AGTYSTRAYDPHLLGIPRSWGIIAIP 335 -------------- gnl|ti|818409300 name:POAA-aaa14c01.g1 mate_pair:818409597 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 62 4e-008 gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 50 8e-005 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 1e-004 ref|XP_453836.1| unnamed protein product [Kluyveromyces lac... 41 0.065 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.25 gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 37 0.71 ref|YP_056023.1| exodeoxyribonuclease V beta chain [Propion... 37 0.93 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 2.1 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 3.5 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 3.5 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102 Score = 61.6 bits (148), Expect = 4e-008 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -2
++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 ----------------- gnl|ti|818409620 name:POAA-aaa14g11.b1 mate_pair:818409324 (892 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAD36809.1| L-allo-threonine aldolase [Thermotoga mariti... 56 1e-006 pdb|1JG8|D Chain D, Crystal Structure Of Threonine Aldolase... 56 1e-006 ref|NP_781685.1| L-allo-threonine aldolase [Clostridium tet... 56 2e-006 ref|YP_076232.1| threonine aldolase [Symbiobacterium thermo... 55 2e-006 dbj|BAC90419.1| L-allo-threonine aldolase [Gloeobacter viol... 55 3e-006 ref|NP_903979.1| probable L-allo-threonine aldolase [Chromo... 55 4e-006 ref|ZP_00600898.1| Threonine aldolase [Rubrobacter xylanoph... 54 6e-006 ref|NP_621959.1| Threonine aldolase [Thermoanaerobacter ten... 54 7e-006 ref|ZP_00777839.1| Tryptophanase [Thermoanaerobacter ethano... 54 7e-006 emb|CAG35732.1| probable low-specificity L-threonine aldola... 54 9e-006 >gb|AAD36809.1| L-allo-threonine aldolase [Thermotoga maritima MSB8] ref|NP_229542.1| L-allo-threonine aldolase [Thermotoga maritima MSB8] Length = 343 Score = 56.2 bits (134), Expect = 1e-006 Identities = 26/31 (83%), Positives = 29/31 (93%) Frame = +1
+IDLRSDTVT PTEEMRKAM +A+VGDDVYG Sbjct: 1 MIDLRSDTVTKPTEEMRKAMAQAEVGDDVYG 31 ------------------- gnl|ti|818409324 name:POAA-aaa14g11.g1 mate_pair:818409620 (713 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAD36809.1| L-allo-threonine aldolase [Thermotoga mariti... 56 1e-006 pdb|1JG8|D Chain D, Crystal Structure Of Threonine Aldolase... 56 1e-006 ref|NP_781685.1| L-allo-threonine aldolase [Clostridium tet... 56 1e-006 ref|YP_076232.1| threonine aldolase [Symbiobacterium thermo... 55 2e-006 dbj|BAC90419.1| L-allo-threonine aldolase [Gloeobacter viol... 55 2e-006 ref|NP_903979.1| probable L-allo-threonine aldolase [Chromo... 55 3e-006 ref|ZP_00600898.1| Threonine aldolase [Rubrobacter xylanoph... 54 4e-006 ref|NP_621959.1| Threonine aldolase [Thermoanaerobacter ten... 54 5e-006 ref|ZP_00777839.1| Tryptophanase [Thermoanaerobacter ethano... 54 5e-006 emb|CAG35732.1| probable low-specificity L-threonine aldola... 54 6e-006 Yüklə 3,49 Mb. Dostları ilə paylaş:
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