Webmaster's Note: As Gerard says below, his Fourth Report came in two parts

>gb|AAD36809.1| L-allo-threonine aldolase [Thermotoga maritima MSB8]

ref|NP_229542.1| L-allo-threonine aldolase [Thermotoga maritima MSB8]

Length = 343

Score = 56.2 bits (134), Expect = 1e-006

Identities = 26/31 (83%), Positives = 29/31 (93%)

Frame = +3
Query: 411 VIDLRSDTVTHPTEEMRKAMFEADVGDDVYG 503

+IDLRSDTVT PTEEMRKAM +A+VGDDVYG

Sbjct: 1 MIDLRSDTVTKPTEEMRKAMAQAEVGDDVYG 31

-----------------------------------

gnl|ti|818409626 name:POAA-aaa14g23.b1

mate_pair:818409330

(720 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|ZP_00502455.1| Peptidase M20 [Polaromonas sp. JS666] >g... 49 2e-004

ref|ZP_00241941.1| COG0624: Acetylornithine deacetylase/Suc... 48 3e-004

ref|NP_643261.1| succinyl-diaminopimelate desuccinylase [Xa... 48 4e-004

ref|YP_242420.1| succinyl-diaminopimelate desuccinylase [Xa... 48 4e-004

ref|YP_199946.1| succinyl-diaminopimelate desuccinylase [Xa... 48 4e-004

ref|YP_364828.1| hypothetical protein XCV3097 [Xanthomonas ... 47 5e-004

ref|ZP_00691801.1| putative peptidase [Rhodoferax ferriredu... 47 6e-004

gb|AAR37507.1| peptidase, M20/M25/M40 family [uncultured ba... 47 8e-004

ref|YP_094844.1| succinyl-diaminopimelate desuccinylase [Le... 46 0.001

ref|YP_126201.1| hypothetical protein lpl0842 [Legionella p... 45 0.002

>ref|ZP_00502455.1| Peptidase M20 [Polaromonas sp. JS666]

gb|EAM41258.1| Peptidase M20 [Polaromonas sp. JS666]

Length = 500

Score = 48.9 bits (115), Expect = 2e-004

Identities = 22/38 (57%), Positives = 27/38 (71%)

Frame = +1
Query: 205 GFPNLQQAGNVLRPFTSLQLSMRIPPTLDGPKAGARLK 318

GFP LQ AGNVLRP+T+ +LS+R PP +D A LK

Sbjct: 350 GFPALQDAGNVLRPYTAFKLSLRFPPLIDASAAVQELK 387

------------------------

gnl|ti|818409345 name:POAA-aaa14k09.g1

mate_pair:818409637

(361 letters)

Score E

Sequences producing significant alignments: (bits) Value

emb|CAH05965.1| putative transport ATP-binding protein [Bac... 48 9e-005

gb|AAO78492.1| ABC transporter, ATP-binding protein [Bacter... 44 0.001

ref|ZP_00802047.1| ABC transporter related [Alkaliphilus me... 41 0.011

ref|ZP_00533994.1| ABC transporter, transmembrane region:AB... 40 0.025

ref|NP_063928.2| ATP-binding cassette, sub-family B, member... 40 0.033

ref|XP_509453.1| PREDICTED: similar to ABCB9 protein [Pan t... 40 0.033

ref|XP_858668.1| PREDICTED: similar to ATP-binding cassette... 40 0.033

ref|XP_534654.2| PREDICTED: similar to ATP-binding cassette... 40 0.033

ref|XP_849373.1| PREDICTED: similar to ATP-binding cassette... 40 0.033

dbj|BAA96044.2| KIAA1520 protein [Homo sapiens] 40 0.033

>emb|CAH05965.1| putative transport ATP-binding protein [Bacteroides fragilis NCTC

9343]

ref|YP_209927.1| putative transport ATP-binding protein [Bacteroides fragilis NCTC

9343]

ref|YP_097512.1| ABC transporter ATP-binding protein [Bacteroides fragilis YCH46]

dbj|BAD46978.1| ABC transporter ATP-binding protein [Bacteroides fragilis YCH46]

Length = 611

Score = 48.1 bits (113), Expect = 9e-005

Identities = 22/33 (66%), Positives = 27/33 (81%)

Frame = -1
Query: 361 LARGLGNYTMDQVVEAAKKANAHKYIMENEDGY 263

+A G+ N TM+QV+EAAK ANAH +IME EDGY

Sbjct: 468 IAFGVENATMEQVIEAAKIANAHDFIMEKEDGY 500

-------------------------

gnl|ti|818409647 name:POAA-aaa14m09.b1

mate_pair:818409356

(904 letters)

Score E

Sequences producing significant alignments: (bits) Value

dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010

gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010

ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 9e-009

ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 1e-006

gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005

ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004

ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001

gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 46 0.002

gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.004

gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010

>dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum]

Length = 282
Score = 69.3 bits (168), Expect = 2e-010

Identities = 32/36 (88%), Positives = 34/36 (94%)

Frame = -1
Query: 562 VNNPTLTEFCFSMIGRADIEGSKSHVAMNAWRPQAS 455

VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS

Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114

--------------------

gnl|ti|818409062 name:POAA-aaa15a12.g1

mate_pair:818409375

(799 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|XP_636020.1| hypothetical protein DDB0188593 [Dictyoste... 78 4e-013

gb|AAX45884.1| hypothetical protein [Zygnema circumcarinatum] 67 9e-010

ref|XP_678650.1| hypothetical protein PB107159.00.0 [Plasmo... 59 2e-007

gb|AAD49620.1| B4 [Human herpesvirus 6B] >gi|9633076|ref|NP... 50 1e-004

gb|EAA20079.1| hypothetical protein [Plasmodium yoelii yoelii] 50 1e-004

ref|XP_643097.1| hypothetical protein DDB0217802 [Dictyoste... 49 2e-004

ref|NP_703434.1| hypothetical protein [Plasmodium falciparu... 49 3e-004

gb|AAX45893.1| hypothetical protein [Zygnema circumcarinatum] 49 3e-004

ref|NP_704485.1| hypothetical protein [Plasmodium falciparu... 48 3e-004

emb|CAF96706.1| unnamed protein product [Tetraodon nigrovir... 48 3e-004

>ref|XP_636020.1| hypothetical protein DDB0188593 [Dictyostelium discoideum]

gb|EAL62515.1| hypothetical protein DDB0188593 [Dictyostelium discoideum]

Length = 4590

Score = 77.8 bits (190), Expect = 4e-013

Identities = 48/123 (39%), Positives = 56/123 (45%), Gaps = 13/123 (10%)

Frame = +1
Query: 157 PYSHRRPSSNDPRVFVEKTFQLSPTLNVLGDFTPKITTVFGWLGIKDIPPPPGCSRPHAS 336

P + R R+FVEK FQLSPTLNVLG+FTPKITTVFGWLGIKDI + P +

Sbjct: 4436 PNTKTRKDLKTGRIFVEKKFQLSPTLNVLGEFTPKITTVFGWLGIKDI----NYTIPFYT 4491
Query: 337 HQS-------------SVA*AWGAGLGSLFTHYTNKQTNKQTNKLTNKQTNKQTNKQTNK 477

H S + A + N + N N NK N N N

Sbjct: 4492 HTGLTDNLEIILNQFLSFSIALNKNNQLITQPINNNKNNNNNNNNNNKNNNNNNNNNNNN 4551
Query: 478 QTN 486

N

Sbjct: 4552 NNN 4554

-----------------

gnl|ti|818409439 name:POAA-aaa15o20.b1

mate_pair:818409136

(918 letters)

Score E

Sequences producing significant alignments: (bits) Value

dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010

gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010

ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 1e-008

ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 2e-006

gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005

ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004

ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001

gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 46 0.002

gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.005

gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010

>dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum]

Length = 282
Score = 69.3 bits (168), Expect = 2e-010

Identities = 32/36 (88%), Positives = 34/36 (94%)

Frame = -2
Query: 389 VNNPTLTEFCFSMIGRADIEGSKSHVAMNAWRPQAS 282

VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS

Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114

Score = 39.7 bits (91), Expect = 0.15

Identities = 26/51 (50%), Positives = 27/51 (52%)

Frame = -3

Query: 550 SAYTIGLNHWFLSY*SDLLSGHTAAPKRLLVVK*EGKTNLSHDGLNPAHVP 398

SA T N FLSY +LL H GKTNLSHDGL PAHVP

Sbjct: 34 SAMTNCANQRFLSYYVELLLRHCHQ---------WGKTNLSHDGLIPAHVP 75

-------------------

gnl|ti|818409212 name:POAA-aaa16b09.g1

mate_pair:818409517

(596 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|YP_180345.1| NADH-quinone oxidoreductase chain F [Ehrli... 65 2e-009

emb|CAI27945.1| NADH-quinone oxidoreductase chain F [Ehrlic... 65 2e-009

emb|CAI26997.1| NADH-quinone oxidoreductase chain F [Ehrlic... 65 2e-009

gb|AAB03672.1| QinA 64 4e-009

ref|XP_636489.1| ubiquinone oxidoreductase [Dictyostelium d... 64 4e-009

emb|CAA90435.1| Hypothetical protein C09H10.3 [Caenorhabdit... 63 6e-009

gb|AAM65274.1| NADH dehydrogenase [Arabidopsis thaliana] 63 6e-009

ref|NP_910779.1| putative NADH dehydrogenase [Oryza sativa ... 63 6e-009

ref|NP_196470.1| FMN binding / NADH dehydrogenase (ubiquino... 63 6e-009

emb|CAE59572.1| Hypothetical protein CBG02970 [Caenorhabdit... 63 6e-009

>ref|YP_180345.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str.

Welgevonden]

emb|CAH58209.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str.

Welgevonden]

Length = 425

Score = 64.7 bits (156), Expect = 2e-009

Identities = 28/34 (82%), Positives = 31/34 (91%)

Frame = +1
Query: 367 DMIEKLSYQIEGHTICALGDAAAWPVQGLIPHFR 468

D++ +SYQIEGHTICALGDAAAWPVQGLI HFR

Sbjct: 378 DLLLSISYQIEGHTICALGDAAAWPVQGLIRHFR 411

---------------

gnl|ti|818409221 name:POAA-aaa16d09.g1

mate_pair:818409525

(906 letters)

Score E

Sequences producing significant alignments: (bits) Value

dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010

gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010

ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 9e-009

ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 2e-006

gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005

ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004

ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001

gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 46 0.002

gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.005

gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010

>dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum]

Length = 282
Score = 69.3 bits (168), Expect = 2e-010

Identities = 32/36 (88%), Positives = 34/36 (94%)

Frame = +3
Query: 339 VNNPTLTEFCFSMIGRADIEGSKSHVAMNAWRPQAS 446

VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS

Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114

----------------------------

gnl|ti|818409232 name:POAA-aaa16f11.g1

mate_pair:818409533

(444 letters)
Database: All non-redundant GenBank CDS

translations+PDB+SwissProt+PIR+PRF excluding environmental samples

2,900,688 sequences; 997,099,166 total letters

Score E

Sequences producing significant alignments: (bits) Value
dbj|BAB33421.1| putative senescence-associated protein [Pis... 55 8e-007

gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 55 8e-007

ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 53 3e-006

ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 42 0.009

gb|AAR25995.1| putative senescence-associated protein [Pyru... 39 0.044

ref|XP_665229.1| senescence-associated protein [Cryptospori... 34 1.8

ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 34 1.8

dbj|BAA80924.1| 128aa long hypothetical protein [Aeropyrum ... 32 5.3

ref|NP_765819.1| hypothetical protein SE2264 [Staphylococcu... 32 6.9

ref|ZP_00366321.1| COG1782: Predicted metal-dependent RNase... 32 6.9

>dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum]

Length = 282

Score = 55.1 bits (131), Expect = 8e-007

Identities = 25/36 (69%), Positives = 27/36 (75%)

Frame = +1
Query: 337 VNNPTLTEFCFIMIGRAYIKGSKCQITMNAWRPLTS 444

VNNPTL EFCF MIGRA I+GSK + MNAW P S

Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114

Score = 33.1 bits (74), Expect = 3.1

Identities = 14/16 (87%), Positives = 14/16 (87%)

Frame = +2

Query: 281 GKTNLSHHGLNPAHVP 328

GKTNLSH GL PAHVP

Sbjct: 60 GKTNLSHDGLIPAHVP 75

--------------------------------------------------------

gnl|ti|818409255 name:POAA-aaa16j13.g1

mate_pair:818409554

(761 letters)

Score E

Sequences producing significant alignments: (bits) Value
ref|XP_446214.1| unnamed protein product [Candida glabrata]... 48 3e-004

emb|CAG90606.1| unnamed protein product [Debaryomyces hanse... 47 5e-004

gb|AAH62952.1| Dhx57 protein [Mus musculus] >gi|39573734|re... 40 0.082

gb|AAH66091.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 5... 40 0.082

gb|AAH65169.1| Dhx57 protein [Mus musculus] 40 0.082

dbj|BAC35451.1| unnamed protein product [Mus musculus] 40 0.082

ref|XP_345626.2| PREDICTED: similar to AW494914 protein [Ra... 40 0.082

dbj|BAB91215.2| gene encoding protein featuring ring-finger... 40 0.082

dbj|BAC99018.1| Makorin1 [Seriola quinqueradiata] 40 0.082

dbj|BAC98837.1| Makorin1 [Seriola quinqueradiata] 40 0.082

>ref|XP_446214.1| unnamed protein product [Candida glabrata]

emb|CAG59138.1| unnamed protein product [Candida glabrata CBS138]

Length = 610
Score = 48.1 bits (113), Expect = 3e-004

Identities = 19/31 (61%), Positives = 21/31 (67%)

Frame = -1
Query: 425 TSSTPCKFFAEGNCRFGTACKFSHVRTQPNN 333

TS TPCKFF +GNCR G +CKF H NN

Sbjct: 4 TSRTPCKFFQQGNCRRGNSCKFGHFLANDNN 34

-----------------------------------------------------

gnl|ti|818409569 name:POAA-aaa16l19.b1

(363 letters)

Score E

Sequences producing significant alignments: (bits) Value

gb|AAM12858.1| chaperonin containing TCP-1 epsilon subunit ... 119 4e-026

ref|XP_640456.1| hypothetical protein DDB0204244 [Dictyoste... 102 3e-021

emb|CAB57321.1| SPAC1420.02c [Schizosaccharomyces pombe] >g... 96 4e-019

ref|XP_323299.1| hypothetical protein [Neurospora crassa] >... 94 1e-018

gb|EAA76353.1| conserved hypothetical protein [Gibberella z... 94 1e-018

gb|AAQ97754.1| chaperonin containing TCP1, subunit 5 (epsil... 94 2e-018

gb|EAL88607.1| t-complex protein 1, epsilon subunit, putati... 93 3e-018

emb|CAG89770.1| unnamed protein product [Debaryomyces hanse... 93 3e-018

ref|XP_393315.2| PREDICTED: similar to CG8439-PA, isoform A... 92 4e-018

emb|CAF98000.1| unnamed protein product [Tetraodon nigrovir... 92 6e-018

>gb|AAM12858.1| chaperonin containing TCP-1 epsilon subunit [Physarum polycephalum]

Length = 536

Score = 119 bits (297), Expect = 4e-026

Identities = 59/71 (83%), Positives = 63/71 (88%)

Frame = -1
Query: 363 EGATVLDNMHVDNQIA*FMVHLSKSQDEEIDDGTTGVVVLDGSLLEQAGSLIGKGIHPTR 184

+GAT+LDNMHVDNQIA MV LSKSQDEEI DGTTGVVVL GSLLEQAGSLI KG+HPTR

Sbjct: 69 DGATILDNMHVDNQIAKLMVQLSKSQDEEIGDGTTGVVVLAGSLLEQAGSLIDKGLHPTR 128
Query: 183 ICEGSDQACKV 151

I EG DQACK+

Sbjct: 129 ISEGFDQACKI 139

>ref|XP_640456.1| hypothetical protein DDB0204244 [Dictyostelium discoideum]

gb|EAL66484.1| hypothetical protein DDB0204244 [Dictyostelium discoideum]

Length = 538

Score = 102 bits (255), Expect = 3e-021

Identities = 52/73 (71%), Positives = 59/73 (80%)

Frame = -1
Query: 363 EGATVLDNMHVDNQIA*FMVHLSKSQDEEIDDGTTGVVVLDGSLLEQAGSLIGKGIHPTR 184

+GAT+L+NM VDNQIA MV LSKSQD+EI DGTTGVVVL GSLLEQA LI KGIHP R

Sbjct: 69 DGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCR 128
Query: 183 ICEGSDQACKVCS 145

I EG + ACK+ +

Sbjct: 129 IYEGYETACKIAT 141

---------------------------------------------------------------

gnl|ti|818409447 name:POAA-aaa17b18.b1

(909 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|XP_643926.1| hypothetical protein DDB0217481 [Dictyoste... 202 1e-050

gb|AAO66552.1| putative cleavage and polyadenylation specif... 184 4e-045

gb|AAL66977.1| putative cleavage and polyadenylation specif... 182 2e-044

ref|NP_176297.1| unknown protein [Arabidopsis thaliana] >gi... 182 2e-044

gb|EAL27667.1| GA20526-PA [Drosophila pseudoobscura] 181 2e-044

emb|CAG10507.1| unnamed protein product [Tetraodon nigrovir... 181 4e-044

gb|AAH85402.1| Cleavage and polyadenylation specificity fac... 180 7e-044

gb|AAT68111.1| cleavage and polyadenylation specificity fac... 180 7e-044

gb|AAH75564.1| Cleavage and polyadenylation specific factor... 179 9e-044

ref|XP_395515.2| PREDICTED: similar to GA20526-PA [Apis mel... 179 1e-043

>ref|XP_643926.1| hypothetical protein DDB0217481 [Dictyostelium discoideum]

gb|AAO51862.1| similar to Homo sapiens (Human). Cleavage and polyadenylation

specificity factor, 73 kDa subunit (CPSF 73 kDa subunit)

[Dictyostelium discoideum]

gb|EAL70292.1| hypothetical protein DDB0217481 [Dictyostelium discoideum]

Length = 774

Score = 202 bits (515), Expect = 1e-050

Identities = 100/148 (67%), Positives = 115/148 (77%)

Frame = -2
Query: 590 FHLDHAAALPYFLEKTSFKGRVFMTHPTKAIYKMLLTDYVKVSNIAIEGSSSQPK*N*R* 411

FHLDHAAA+PYF+ KT FKGRVFMTHPTKAIY MLL+DYVKVSNI +

Sbjct: 98 FHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSNITRD------------ 145
Query: 410 LHEMKAHI*SEMLFDEADLIRSMEKIEQINYHQEQEHNGIKFTCYNAGHVLGAAMFLVEI 231

+MLFD++DL RS+EKIE++ Y Q+ EHNGIK TC+NAGHVLGAAMF++EI

Sbjct: 146 ---------DDMLFDKSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEI 196
Query: 230 AGTKVLYTGDFSRQEDRHLMGAETPPVK 147

AG K+LYTGDFSRQEDRHLMGAETPPVK

Sbjct: 197 AGVKILYTGDFSRQEDRHLMGAETPPVK 224

--------------------------------------------------------------

gnl|ti|818409151 name:POAA-aaa17d14.g1

(558 letters)

Score E

Sequences producing significant alignments: (bits) Value

ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hom... 55 2e-006

ref|XP_626617.1| hypothetical protein cgd3_310 [Cryptospori... 55 2e-006

ref|NP_001003126.1| retinitis pigmentosa GTPase regulator [... 55 2e-006

gb|AAF73143.1| retinitis pigmentosa GTP-ase regulator RPGR ... 55 2e-006

gb|AAF73142.1| retinitis pigmentosa GTP-ase regulator RPGR ... 55 2e-006

gb|AAF73141.1| retinitis pigmentosa GTP-ase regulator RPGR ... 55 2e-006

ref|NP_060661.3| regulator of chromosome condensation (RCC1... 53 6e-006

ref|XP_417056.1| PREDICTED: similar to Chromosome condensat... 53 6e-006

gb|AAH75441.1| MGC89218 protein [Xenopus tropicalis] >gi|52... 53 6e-006

>ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis]

gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]

Length = 1878

Score = 54.7 bits (130), Expect = 2e-006

Identities = 30/95 (31%), Positives = 40/95 (42%)

Frame = -1
Query: 549 NAKVKYTTIGQGIMGALGTDGALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLL 370

NAK+ + G AL G ++ WG G G DV+SP K+

Sbjct: 165 NAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAG--------- 215
Query: 369 INLLQIPTSAPVIHLACGDTHAAYVNEKGEVFTWG 265

PT V+H+A G H+ NE G+VF WG

Sbjct: 216 ------PTDKKVLHIAAGARHSLCCNEDGQVFAWG 244

Score = 37.0 bits (84), Expect = 0.36

Identities = 19/86 (22%), Positives = 38/86 (44%)

Frame = -1

Query: 522 GQGIMGALGTDGALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLLINLLQIPTS 343

G+ G + + G +Y WG + G+G+ +D P+++ +S

Sbjct: 280 GESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGI----------------SS 323
Query: 342 APVIHLACGDTHAAYVNEKGEVFTWG 265

P + L G ++ +++ GEV+ WG

Sbjct: 324 LPFVQLTLGAFNSMALSQSGEVYIWG 349

Score = 35.0 bits (79), Expect = 1.4

Identities = 22/77 (28%), Positives = 32/77 (41%)

Frame = -1

Query: 489 GALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLLINLLQIPTSAPVIHLACGDT 310

G ++ WG N Q G + + SF L +I S P+ +ACG

Sbjct: 507 GTIFAWGDNKYGQLGIDTRRRKSQDGDKNESF-------LNEPTEIKFSEPIRRVACGSW 559
Query: 309 HAAYVNEKGEVFTWGWG 259

H+ + KG F+WG G

Sbjct: 560 HSLCCDIKGNCFSWGRG 576

Score = 32.3 bits (72), Expect = 8.8

Identities = 11/35 (31%), Positives = 21/35 (60%)

Frame = -1

Query: 363 LLQIPTSAPVIHLACGDTHAAYVNEKGEVFTWGWG 259

++ P +A + ++CG H+ +++ G VF WG G

Sbjct: 159 IVNFPFNAKISRISCGANHSLALSDSGLVFAWGIG 193

>ref|XP_626617.1| hypothetical protein cgd3_310 [Cryptosporidium parvum]

gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum]

Length = 1878

Score = 54.7 bits (130), Expect = 2e-006

Identities = 30/95 (31%), Positives = 40/95 (42%)

Frame = -1
Query: 549 NAKVKYTTIGQGIMGALGTDGALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLL 370

NAK+ + G AL G ++ WG G G DV+SP K+

Sbjct: 165 NAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAG--------- 215
Query: 369 INLLQIPTSAPVIHLACGDTHAAYVNEKGEVFTWG 265

PT V+H+A G H+ NE G+VF WG

Sbjct: 216 ------PTDKKVLHIAAGARHSLCCNEDGQVFAWG 244

Score = 37.0 bits (84), Expect = 0.36

Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = -1
Query: 522 GQGIMGALGTDGALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLLINLLQIPTS 343

G+ G + + G +Y WG + G+G+ +D P+++ +S

Sbjct: 280 GESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGI----------------SS 323
Query: 342 APVIHLACGDTHAAYVNEKGEVFTWG 265

P + L G ++ +++ GEV+ WG

Sbjct: 324 LPFVQLTLGAFNSMALSQSGEVYIWG 349

Score = 34.7 bits (78), Expect = 1.8

Identities = 22/77 (28%), Positives = 32/77 (41%)

Frame = -1

Query: 489 GALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLLINLLQIPTSAPVIHLACGDT 310

G ++ WG N Q G + + SF L +I S P+ +ACG

Sbjct: 507 GTIFAWGDNKYGQLGVDTRRRKSQNGDKNESF-------LNEPTEIKFSEPIRRVACGSW 559
Query: 309 HAAYVNEKGEVFTWGWG 259

H+ + KG F+WG G

Sbjct: 560 HSLCCDIKGNCFSWGRG 576

Score = 33.1 bits (74), Expect = 5.2

Identities = 23/90 (25%), Positives = 37/90 (41%)

Frame = -1

Query: 528 TIGQGIMGALGTDGALYMWGRNLENQSGNGSATDVFSPQKVSTSFPFCFCLLLINLLQIP 349

T+G G G LG +G + N S ++P +FPF

Sbjct: 121 TMGLGDRGRLGYTRGYTEFGNEHDKNDLNESW---YTPVPCIVNFPF------------- 164
Query: 348 TSAPVIHLACGDTHAAYVNEKGEVFTWGWG 259

+A + ++CG H+ +++ G VF WG G

Sbjct: 165 -NAKISRISCGANHSLALSDSGLVFAWGIG 193

---------------------------------------------------------------------

nl|ti|818409456 name:POAA-aaa17d16.b1

mate_pair:818409152

(679 letters)

Score E

Sequences producing significant alignments: (bits) Value
emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 84 4e-015

gb|AAL08441.1| chloramphenicol acetyltransferase [Shigella ... 84 4e-015

gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 84 4e-015

gb|AAV86079.1| chloramphenicol acetyltransferase [Shuttle v... 84 4e-015

emb|CAA71024.1| chloramphenicol acetyltransferase [unidenti... 84 4e-015

gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 84 4e-015

dbj|BAB32741.1| chloramphenicol acetyltransferase [Cloning ... 84 4e-015