Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
|
|
gb|AAF86675.1| chloramphenicol transacetylase [Integration ... 84 4e-015 dbj|BAA03187.1| chloramphenicol acetyl transferase [synthet... 84 4e-015 gb|AAC53603.1| chloramphenicol acetyltransferase 84 4e-015 >emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromonas hydrophila] gb|AAB67677.1| choramphenicol acetyltransferase [Cloning vector pJB3Cm6] gb|AAS87172.1| chloramphenicol acetyltransferase [Achromobacter xylosoxidans] gb|AAK55328.1| chloramphenicol acetyltransferase [Cloning vector pALTER(R)*-MAX] gb|AAB39977.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Promoter vector] gb|AAB39975.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Enhancer vector] gb|AAB39973.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Control vector]
gb|AAB39971.1| chloramphenicol acetyltransferase [Reporter vector pCAT3-Basic vector]
gb|AAC53634.1| chloramphenicol acetyltransferase gb|AAC53624.1| chloramphenicol acetyltransferase gb|AAA72895.1| chloramphenicol acetyltransferase Length = 219 Score = 84.0 bits (206), Expect = 4e-015 Identities = 37/43 (86%), Positives = 38/43 (88%) Frame = -2
YTQGDKV MPLAI +HHAVCDGFHVGRM NELQQYCDE GGA Sbjct: 177 YTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA 219 --------------------------------------------------------- nl|ti|818409475 name:POAA-aaa17h24.b1 mate_pair:818409170 (642 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_531621.1| PREDICTED: hypothetical protein XP_531621 ... 110 3e-023 ref|XP_514248.1| PREDICTED: similar to Chaperone-activity o... 96 7e-019 emb|CAE70459.1| Hypothetical protein CBG17043 [Caenorhabdit... 78 3e-013 gb|AAC67560.1| fibrinogen A-alpha chain [Felis catus] 75 2e-012 emb|CAE72400.1| Hypothetical protein CBG19558 [Caenorhabdit... 75 2e-012 emb|CAE70446.1| Hypothetical protein CBG17025 [Caenorhabdit... 73 6e-012 emb|CAE70447.1| Hypothetical protein CBG17026 [Caenorhabdit... 72 1e-011 dbj|BAA07813.1| fibrinogen A-alpha-chain [Canis familiaris] 72 2e-011 ref|XP_532697.2| PREDICTED: similar to Fibrinogen alpha cha... 72 2e-011 gb|AAC67563.1| fibrinogen A-alpha chain [Lama glama] 71 3e-011 >ref|XP_531621.1| PREDICTED: hypothetical protein XP_531621 [Pan troglodytes] Length = 286 Score = 110 bits (276), Expect = 3e-023 Identities = 52/127 (40%), Positives = 66/127 (51%), Gaps = 4/127 (3%) Frame = -3
G V +W C V +W CG V VW CG V +CG +W C V +W ++ VW C V Sbjct: 161 GPVDMWTCECVDLWMCGPVSVWNCGPV---DCGRVDLWTCECVDMW---TMDVWTCECVD 214
+W CG + C V +W CG VG+W CG V +W CG V V CG +W G + T Sbjct: 215 LWTCGPLWTCECVDLWTCGPVGLWMCGPVDMWTCGPVDVWTCGRVDLWT--LCGPVDLLT 272
CG VW
Sbjct: 273 CGRVNVW 279 Score = 107 bits (266), Expect = 4e-022 Identities = 51/127 (40%), Positives = 62/127 (48%), Gaps = 22/127 (17%) Frame = -3 Query: 436 AQPEGVWECGSVGVWECGSVGVWECGSVG------------------VWECGSVGVWECG 311 A P +W C V +W CG V VW CG V VW C V +W CG Sbjct: 160 AGPVDMWTCECVDLWMCGPVSVWNCGPVDCGRVDLWTCECVDMWTMDVWTCECVDLWTCG 219
+W C V +W CG VG+W CG V +W CG V+ CG V +W CG V + CG V Sbjct: 220 P--LWTCECVDLWTCGPVGLWMCGPVDMWTCGPVDVWTCGRVDLWTLCGPVDLLTCGRVN 277
VW C +V
Sbjct: 278 VWTCEAV 284 Score = 104 bits (259), Expect = 3e-021 Identities = 53/128 (41%), Positives = 65/128 (50%), Gaps = 14/128 (10%) Frame = -2 Query: 431 T*GSVGVWECGSVGVWECGSVGVW-----ECGRVGVWECGSVG-----VWECGSVGVWER 282 T G V +W C V +W CG V VW +CGRV +W C V VW C V +W Sbjct: 159 TAGPVDMWTCECVDLWMCGPVSVWNCGPVDCGRVDLWTCECVDMWTMDVWTCECVDLWTC 218
G + W C V +W CG VG+W CG +W CG V VW CG V + CG V + CG Sbjct: 219 GPL--WTCECVDLWTCGPVGLWMCGPVDMWTCGPVDVWTCGRVDLWTLCGPVDLLTCGRV 276
V C +V
Sbjct: 277 NVWTCEAV 284 Score = 97.4 bits (241), Expect = 3e-019 Identities = 48/140 (34%), Positives = 63/140 (45%), Gaps = 11/140 (7%) Frame = -3 Query: 412 CGSVGVWECG----SVGVWECG-SVGVWECGSVGVWECGSAGVWECGSVGVWECGSVGVW 248 CG V +W CG V W G V G V +W C +W CG V VW CG V Sbjct: 131 CGPVNLWTCGLADLCVNPWTRGLRVNPCTAGPVDMWTCECVDLWMCGPVSVWNCGPV--- 187
+CG V +W C V+ ++ VW C V +W CG V +W CG VG+ CG +W Sbjct: 188 DCGRVDLWTCECVDMWTMDVWTCECVDLWTCGPLWTCECVDLWTCGPVGLWMCGPVDMWT 247
+ C +W + P Sbjct: 248 CGPVDVWTCGRVDLWTLCGP 267 Score = 85.9 bits (211), Expect = 9e-016 Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 7/79 (8%) Frame = -3 Query: 421 VWECGSVGVWECGS------VGVWECGSVGVWECGSVGVWECGSAGVWECGSVGVWE-CG 263 VW C V +W CG V +W CG VG+W CG V +W CG VW CG V +W CG Sbjct: 207 VWTCECVDLWTCGPLWTCECVDLWTCGPVGLWMCGPVDMWTCGPVDVWTCGRVDLWTLCG 266
V + CG V VW C +V+ Sbjct: 267 PVDLLTCGRVNVWTCEAVD 285 Score = 68.6 bits (166), Expect = 2e-010 Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = -1 Query: 432 NLRECGSVGVWECGSVGVWECGSVGVWACGSVGVWE-CGSVGVRECGSVGAWECGSV 265 +L CG VG+W CG V +W CG V VW CG V +W CG V + CG V W C +V Sbjct: 228 DLWTCGPVGLWMCGPVDMWTCGPVDVWTCGRVDLWTLCGPVDLLTCGRVNVWTCEAV 284 ---------------------------------------------------------------------- gnl|ti|818409181 name:POAA-aaa17l06.g1 (919 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_646988.1| hypothetical protein DDB0216635 [Dictyoste... 85 3e-015 ref|XP_635642.1| hypothetical protein DDB0188946 [Dictyoste... 84 9e-015 ref|YP_142516.1| unknown [Acanthamoeba polyphaga mimivirus]... 73 1e-011 ref|YP_142414.1| unknown [Acanthamoeba polyphaga mimivirus]... 70 8e-011 ref|XP_637259.1| hypothetical protein DDB0187441 [Dictyoste... 66 1e-009 ref|YP_142640.1| unknown [Acanthamoeba polyphaga mimivirus]... 63 2e-008 ref|XP_642677.1| hypothetical protein DDB0169194 [Dictyoste... 62 2e-008 ref|XP_635233.1| hypothetical protein DDB0183913 [Dictyoste... 62 2e-008 ref|YP_142768.1| unknown [Acanthamoeba polyphaga mimivirus]... 61 6e-008 ref|XP_647366.1| hypothetical protein DDB0189601 [Dictyoste... 56 2e-006 >ref|XP_646988.1| hypothetical protein DDB0216635 [Dictyostelium discoideum] gb|EAL73134.1| hypothetical protein DDB0216635 [Dictyostelium discoideum] Length = 729
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 12/184 (6%) Frame = -1
L+ SFD + + I+ S FG +FN ++ D LP +LT L FG +FN+ V Sbjct: 498 LTNLSFDYYFNQPIEKDVLPINLTSLSFGASFNQSIEKDVLPCNLTSLSFGYSFNQPVEK 557
D LP NLI+LKFG FNQ + D LP +L L+FG F++ + LP + +L+F F Sbjct: 558 DVLPYNLINLKFGSKFNQPIENDVLPYSLKSLSFGCDFNQPIEKGVLPYDLINLSFGSKF 617
N D LP+ LT L FG F+Q ++ LP+ I +L F ++N F I S S L+ Sbjct: 618 NQFIEIDILPKTLTSLYFGSMFNQKIEINILPN-NITSLSFSNINYNLHFPIGSLPSSLK 676
L +
Sbjct: 677 ILTI 680 Score = 80.1 bits (196), Expect = 1e-013 Identities = 64/157 (40%), Positives = 85/157 (54%), Gaps = 12/157 (7%) Frame = -1 Query: 787 DIFQLFQQANSIFTIHFNSSYFGCNFNCTV--DFLPHSLTHLIFGDNFNKAVDH--LPPN 620 D F + ++F + FG FN V D LP +L L FG NFN+ ++ LP N Sbjct: 416 DKFNCLIKKGNLFNHNIKEISFGNKFNEIVEMDSLPKNLKTLSFGLNFNQILNENELPLN 475
L +L FGYHFN+ + + +P L L+F F++ + LP +T L+F +FN Sbjct: 476 LKNLSFGYHFNKPIKINVIPITLTNLSFDYYFNQPIEKDVLPINLTSLSFGASFNQSIEK 535
D LP NLT LSFG F+QPV D LP LI NL F S Sbjct: 536 DVLPCNLTSLSFGYSFNQPVEKDVLPYNLI-NLKFGS 571 ----------------------------------------------------------------- gnl|ti|818409183 name:POAA-aaa17l10.g1 (760 letters) Score E Sequences producing significant alignments: (bits) Value gb|AAO12857.1| pats1 [Dictyostelium discoideum] 55 2e-006 ref|XP_645923.1| putative protein tyrosine kinase [Dictyost... 55 2e-006 gb|AAO83651.1| putative protein Roco6 [Dictyostelium discoi... 41 0.048 ref|XP_644816.1| putative protein tyrosine kinase [Dictyost... 41 0.048 ref|XP_641642.1| putative protein tyrosine kinase [Dictyost... 41 0.048 gb|EAA06914.2| ENSANGP00000001678 [Anopheles gambiae str. P... 40 0.11 ref|XP_647005.1| putative protein tyrosine kinase [Dictyost... 39 0.14 ref|XP_636808.1| putative protein tyrosine kinase [Dictyost... 39 0.18 ref|XP_392166.2| PREDICTED: similar to ENSANGP00000001678 [... 39 0.24 gb|AAU84033.1| leucine-rich-repeat protein [uncultured arch... 38 0.31 >gb|AAO12857.1| pats1 [Dictyostelium discoideum] Length = 2964 Score = 55.1 bits (131), Expect = 2e-006 Identities = 26/78 (33%), Positives = 47/78 (60%) Frame = -3
C I+D L A +LH G+++ F ++ G+ K V+LDP+W++ ++I TT+H Sbjct: 1793 CTITDEAELLRATMFLHQLGSLVYFPKEPGL-----KQFVILDPQWITTMLSSIITTKHS 1847
+A+ G L + L++I+ P Sbjct: 1848 YAKDGILNHKSLKQIWRP 1865 ------------------------------------------------------------------- gnl|ti|818409501 name:POAA-aaa17n16.b1 mate_pair:818409196 (907 letters) Score E
Sequences producing significant alignments: (bits) Value ref|YP_142635.1| unknown [Acanthamoeba polyphaga mimivirus]... 57 7e-007 ref|YP_142414.1| unknown [Acanthamoeba polyphaga mimivirus]... 52 2e-005 gb|AAO53144.1| similar to Dictyostelium discoideum (Slime m... 52 3e-005 ref|XP_643428.1| hypothetical protein DDB0202531 [Dictyoste... 52 3e-005 ref|YP_142524.1| unknown [Acanthamoeba polyphaga mimivirus]... 52 4e-005 ref|XP_646988.1| hypothetical protein DDB0216635 [Dictyoste... 49 2e-004 ref|XP_637259.1| hypothetical protein DDB0187441 [Dictyoste... 47 0.001 ref|XP_636283.1| hypothetical protein DDB0219429 [Dictyoste... 47 0.001 ref|XP_629673.1| hypothetical protein DDB0184300 [Dictyoste... 46 0.002 ref|XP_635642.1| hypothetical protein DDB0188946 [Dictyoste... 45 0.003 >ref|YP_142635.1| unknown [Acanthamoeba polyphaga mimivirus] gb|AAV50553.1| unknown [Acanthamoeba polyphaga mimivirus] Length = 292 Score = 57.4 bits (137), Expect = 7e-007 Identities = 27/75 (36%), Positives = 50/75 (66%) Frame = -1
I +N++ L+F +F++ I+ +P +THLS A+FN V ++P+S+ +L LG F + Sbjct: 80 INIPKNVSRLTFCPQFNKSIDDIPSTITHLSL--GAAFNGEVSNIPTSVTHLKLGVSFKR 137
+ ++PLS+THL ++ Sbjct: 138 KLSEIPLSVTHLTLN 152 ---------------------------------------------------------------------- gnl|ti|818409510 name:POAA-aaa17p20.b1 mate_pair:818409206 (936 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_797386.1| PREDICTED: similar to rieske [Strongylocen... 60 8e-008 gb|AAH75979.1| Zgc:92275 [Danio rerio] >gi|50540290|ref|NP_... 59 3e-007 emb|CAF90728.1| unnamed protein product [Tetraodon nigrovir... 58 4e-007 gb|AAR37773.1| iron-sulfur cluster-binding protein, Rieske ... 55 5e-006 gb|EAA04927.2| ENSANGP00000016076 [Anopheles gambiae str. P... 54 8e-006 ref|XP_425346.1| PREDICTED: similar to Hypothetical protein... 52 2e-005 emb|CAA98235.2| Hypothetical protein C12D8.5 [Caenorhabditi... 49 3e-004 ref|ZP_00674193.1| Rieske (2Fe-2S) region [Trichodesmium er... 49 3e-004 emb|CAE64763.1| Hypothetical protein CBG09553 [Caenorhabdit... 49 3e-004 gb|AAD46364.1| PrnD [Burkholderia cepacia] 48 6e-004 >ref|XP_797386.1| PREDICTED: similar to rieske [Strongylocentrotus purpuratus] Length = 329
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Frame = +1
GAN+ +GG V GNC+ CPFH W F+ G+C IPY EK + Sbjct: 36 GANMAIGGTVKGNCLTCPFHGWSFEGKEGKCVDIPYQEKGK------------------- 76
VP Q K +P +E+NG +L+ +D + R P + Sbjct: 77 -------------------SVPAQAKVKSWPVIEQNGFVLVWHDVEGREPSW 109 -------------------------------------------------------------------- gnl|ti|818419922 name:POAA-aaa18e07.g1 mate_pair:818419605 (782 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_636285.1| hypothetical protein DDB0188387 [Dictyoste... 102 2e-020 dbj|BAD81083.1| putative COP9 signalosome complex subunit 2... 92 1e-017 dbj|BAD96310.1| COP9 constitutive photomorphogenic homolog ... 86 1e-015 dbj|BAD93036.1| COP9 constitutive photomorphogenic homolog ... 86 1e-015 ref|XP_592476.1| PREDICTED: similar to COP9 (constitutive p... 86 1e-015 ref|NP_034069.2| COP9 (constitutive photomorphogenic) homol... 86 1e-015 ref|NP_001026767.1| COP9 constitutive photomorphogenic homo... 86 1e-015 ref|XP_869617.1| PREDICTED: similar to COP9 (constitutive p... 86 1e-015 ref|XP_862009.1| PREDICTED: similar to COP9 (constitutive p... 86 1e-015 dbj|BAB26900.1| unnamed protein product [Mus musculus] 86 1e-015 >ref|XP_636285.1| hypothetical protein DDB0188387 [Dictyostelium discoideum] gb|EAL62767.1| hypothetical protein DDB0188387 [Dictyostelium discoideum] Length = 449 Score = 102 bits (253), Expect = 2e-020 Identities = 52/58 (89%), Positives = 57/58 (98%) Frame = +3
+DLLRNIRTQVLLKLL+PYTRIRI FISKELNIPSSDVE+LLVSLILDNKIRG+IDQ+ Sbjct: 352 EDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNKIRGSIDQV 409 -------------------------------------------------------------------- gnl|ti|818419939 name:POAA-aaa18g21.g1 mate_pair:818419619 (825 letters) Score E
Sequences producing significant alignments: (bits) Value pir||S53302 H+-exporting ATPase (EC 3.6.3.6) (clone HAA13) ... 86 1e-015 gb|EAN78628.1| P-type H+-ATPase, putative [Trypanosoma bruc... 83 1e-014 gb|AAM55480.1| P-type-H+-ATPase [Trypanosoma brucei] 83 1e-014 gb|EAN78627.1| P-type H+-ATPase, putative [Trypanosoma bruc... 83 1e-014 emb|CAJ04294.1| P-type H+-ATPase, putative [Leishmania major] 81 5e-014 emb|CAJ04293.1| P-type H+-ATPase, putative [Leishmania major] 81 5e-014 sp|P11718|ATXA_LEIDO Probable proton ATPase 1A (LDH1A prote... 81 5e-014 gb|AAL87542.1| proton motive P-type ATPase 2 [Trypanosoma c... 81 5e-014 gb|AAL87541.1| proton motive P-type ATPase 1 [Trypanosoma c... 81 5e-014 sp|P12522|ATXB_LEIDO Probable proton ATPase 1B (LDH1B prote... 81 5e-014 >pir||S53302 H+-exporting ATPase (EC 3.6.3.6) (clone HAA13) - golden alga (Heterosigma akashiwo) Length = 977 Score = 86.3 bits (212), Expect = 1e-015 Identities = 42/72 (58%), Positives = 57/72 (79%) Frame = -3
+F+V+ L+ +AIE+V T T+A+GS+ L+ AIV+RL+AI++LAG+NMLCSDKTGTL Sbjct: 330 SFVVVLLVASIPIAIEVVVTATMALGSRELAKMDAIVARLSAIEELAGMNMLCSDKTGTL 389
T NKM IQ D P Sbjct: 390 TLNKMVIQDDCP 401 Score = 64.7 bits (156), Expect = 4e-009 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = -2 Query: 602 KMGGTVARGETHATVVLTGKDTFFGKTASMLGETNERSNLQNLLIKIMIVLCCHAFLLVL 423 KMG TVARGE ATV TG +TFFGKTA+++ +E +LQ +L+ IM L +FLL Sbjct: 253 KMGSTVARGEVEATVTATGMNTFFGKTANLIQSVDELGHLQKILLYIMAFLIVLSFLLCG 312
YLL + K
Sbjct: 313 ITLWYLLDQGEDFK 326 Score = 36.6 bits (83), Expect = 1.1 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = -3 Query: 739 GDLIEQASGVAVQADCMLNHGTIDVDE 659 GDL+ +G AV ADCM+N G I+VD+ Sbjct: 208 GDLVILGAGAAVPADCMINEGQIEVDQ 234 ----------------------------------------------------------------------- gnl|ti|818419625 name:POAA-aaa18i15.b1 mate_pair:818419946 (711 letters) Score E
Sequences producing significant alignments: (bits) Value gb|EAL84426.1| peroxidase 2 family protein [Aspergillus fum... 57 4e-007 ref|XP_664061.1| hypothetical protein AN6457.2 [Aspergillus... 50 9e-005 gb|EAA70793.1| hypothetical protein FG08911.1 [Gibberella z... 50 9e-005 gb|AAN31515.1| peroxidase-like protein [Phytophthora infest... 49 2e-004 gb|AAN31510.1| peroxidase-like protein [Phytophthora infest... 46 0.001 gb|AAL87046.1| putative oxidase [Mycosphaerella pini] 42 0.015 ref|XP_660182.1| hypothetical protein AN2578.2 [Aspergillus... 42 0.015 gb|EAA71694.1| hypothetical protein FG03708.1 [Gibberella z... 42 0.019 gb|EAL86074.1| peroxidase, putative [Aspergillus fumigatus ... 42 0.025 ref|XP_681092.1| hypothetical protein AN7823.2 [Aspergillus... 42 0.025 >gb|EAL84426.1| peroxidase 2 family protein [Aspergillus fumigatus Af293] ref|XP_746464.1| hypothetical protein Afu4g02780 [Aspergillus fumigatus Af293] Length = 341 Score = 57.4 bits (137), Expect = 4e-007 Identities = 27/60 (45%), Positives = 38/60 (63%) Frame = +3
A+ +RND GDN ++N TL E L+S SKDG+ ++ +D + +R S A NPNF FG Sbjct: 199 AAPTRNDRAVGDNINLNMTLFESLLSFSKDGETLSLEDLAEHHHLRHNQSKAENPNFVFG 258 ------------------------------------------------------------------------- gnl|ti|818419633 name:POAA-aaa18k13.b1 mate_pair:818419955 (442 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_636079.1| hypothetical protein DDB0188542 [Dictyoste... 85 9e-016 gb|AAW47173.1| vesicle-mediated transport-related protein, ... 67 3e-010 ref|NP_067586.1| adaptor-related protein complex 2, sigma 1... 65 1e-009 gb|EAL90733.1| AP-2 adaptor complex subunit sigma, putative... 64 2e-009 ref|XP_658326.1| hypothetical protein AN0722.2 [Aspergillus... 64 2e-009 ref|XP_363836.1| hypothetical protein MG01762.4 [Magnaporth... 64 2e-009 ref|XP_328695.1| hypothetical protein [Neurospora crassa] >... 64 2e-009 ref|XP_792225.1| PREDICTED: similar to Clathrin coat assemb... 64 2e-009 ref|XP_786054.1| PREDICTED: similar to CG6056-PA [Strongylo... 64 2e-009 gb|ABA96138.1| clathrin assembly protein AP17-like protein ... 63 4e-009 >ref|XP_636079.1| hypothetical protein DDB0188542 [Dictyostelium discoideum] gb|EAL62572.1| hypothetical protein DDB0188542 [Dictyostelium discoideum] Length = 155 Score = 84.7 bits (208), Expect = 9e-016 Identities = 35/46 (76%), Positives = 44/46 (95%) Frame = -3
L+QNRQGKTRLSKWY PY+D+EKRKL +EIHK++N+RE+KFTNF+E Sbjct: 19 LIQNRQGKTRLSKWYTPYEDVEKRKLSHEIHKIVNSRETKFTNFVE 64 --------------------------------------------------------------- nl|ti|818419959 name:POAA-aaa18k21.g1 (246 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_645519.1| hypothetical protein DDB0168507 [Dictyoste... 45 6e-004 ref|XP_759610.1| hypothetical protein UM03463.1 [Ustilago m... 45 8e-004 emb|CAB52577.1| SPAC1952.13 [Schizosaccharomyces pombe] >gi... 42 0.009 gb|AAW42851.1| Nuclear elongation and deformation protein 1... 41 0.011 ref|XP_787872.1| PREDICTED: similar to Lipin 2 [Strongyloce... 41 0.011 gb|EAL90792.1| smp2 protein [Aspergillus fumigatus Af293] >... 41 0.015 ref|XP_658406.1| hypothetical protein AN0802.2 [Aspergillus... 41 0.015 gb|EAA70459.1| hypothetical protein FG00866.1 [Gibberella z... 41 0.015 emb|CAE76557.1| related to SMP2 protein [Neurospora crassa] 40 0.019 ref|XP_363385.1| hypothetical protein MG01311.4 [Magnaporth... 40 0.019 >ref|XP_645519.1| hypothetical protein DDB0168507 [Dictyostelium discoideum] gb|AAS38930.1| hypothetical protein [Dictyostelium discoideum] gb|EAL71555.1| hypothetical protein DDB0168507 [Dictyostelium discoideum] Length = 1325 Score = 45.4 bits (106), Expect = 6e-004 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -2
GVA+LYSNI +N Y+I+YLTSRAIGQ Sbjct: 1118 GVAELYSNIKENGYQIIYLTSRAIGQ 1143 ------------------------------------------------------------- gnl|ti|818419639 name:POAA-aaa18m03.b1 mate_pair:818419962 (862 letters) Score E
Sequences producing significant alignments: (bits) Value dbj|BAE00919.1| unnamed protein product [Macaca fascicularis] 69 2e-010 gb|AAH63454.1| USP15 protein [Homo sapiens] >gi|18088783|gb... 69 2e-010 ref|XP_869702.1| PREDICTED: similar to Ubiquitin carboxyl-t... 69 2e-010 ref|XP_878711.1| PREDICTED: similar to ubiquitin specific p... 69 2e-010 ref|XP_878513.1| PREDICTED: similar to ubiquitin specific p... 69 2e-010 ref|XP_878412.1| PREDICTED: similar to ubiquitin specific p... 69 2e-010 ref|XP_878212.1| PREDICTED: similar to ubiquitin specific p... 69 2e-010 ref|XP_878108.1| PREDICTED: similar to ubiquitin specific p... 69 2e-010 ref|XP_618484.2| PREDICTED: similar to ubiquitin specific p... 69 2e-010 gb|AAH50042.1| Ubiquitin specific protease 15 [Mus musculus] 69 2e-010 >dbj|BAE00919.1| unnamed protein product [Macaca fascicularis] Length = 150
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = +2
QR+ I L K L +TWYL+ +W+K WK++VGFD+ + Q PIDNS Sbjct: 12 QRSDIATLLKT--SLREGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSG 69
L+ S LK L+D+ DY L+P + WN L +WY Sbjct: 70 LLKDGDAQS----LKEHLIDELDYILLPTEGWNKLVSWY 104 ------------------------------------------------------ gnl|ti|818421155 name:POAA-aaa19c10.b1 mate_pair:820219753 (487 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAI12454.1| coatomer protein complex, subunit alpha [Ho... 199 4e-050 Yüklə 3,49 Mb. Dostları ilə paylaş:
|