Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|XP_783384.1| PREDICTED: similar to predicted CDS, endon... 92 6e-018 ref|XP_785177.1| PREDICTED: similar to endonuclease/exonucl... 91 1e-017 ref|XP_798559.1| PREDICTED: similar to a disintegrin and me... 91 1e-017 tpe|CAJ00236.1| TPA: endonuclease-reverse transcriptase [Sc... 91 2e-017 ref|NP_048132.1| ORF MSV061 putative LINE reverse transcrip... 89 7e-017 gb|AAW25617.1| SJCHGC02887 protein [Schistosoma japonicum] 88 1e-016 ref|XP_795995.1| PREDICTED: similar to predicted CDS, endon... 88 1e-016 ref|XP_782073.1| PREDICTED: similar to predicted CDS, rever... 87 2e-016 ref|XP_790482.1| PREDICTED: similar to predicted CDS, endon... 86 4e-016 >ref|XP_788695.1| PREDICTED: similar to predicted CDS, reverse transcriptase family member (1O881) [Strongylocentrotus purpuratus] Length = 766
Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 2/163 (1%) Frame = +1
GPDNI + IK T +E L KL N TC+ +KIP +WK++ + ++KKG+ D Sbjct: 314 GPDNILIDTIKEGGDT--ITEELAKLYNACTCMQTRKIPHQWKEATMIILHKKGDKRDLK 371
NYRPI+L+ YK+Y+ +IT RL +++NQ Q GFR+ T I T+ + E Sbjct: 372 NYRPISLLSNLYKLYTKIITNRLEKILDNNQ--PREQAGFRRGFSTMDHIHTINQLKEKC 429
+ PL V F+D +KA+DSVE +A+ L G + + I+ Sbjct: 430 QEFNIPLCVAFVDYEKAFDSVETYAVLKALQDQGINNTYIKIL 472 --------------------------------------------------------- gnl|ti|820220462 name:POAA-aaa20f09.g1 mate_pair:818419329 (362 letters) Score E
Sequences producing significant alignments: (bits) Value gb|EAA12654.3| ENSANGP00000018513 [Anopheles gambiae str. P... 49 5e-005 emb|CAD24408.1| novel protein similar to mouse silencing me... 48 9e-005 emb|CAD24407.1| novel protein similar to mouse silencing me... 48 9e-005 ref|XP_689998.1| PREDICTED: similar to nuclear receptor co-... 48 9e-005 gb|AAC16467.1| unknown protein [Arabidopsis thaliana] 48 1e-004 ref|XP_640918.1| hypothetical protein DDB0204117 [Dictyoste... 48 1e-004 gb|AAS38925.1| hypothetical protein [Dictyostelium discoideum] 47 2e-004 emb|CAH90951.1| hypothetical protein [Pongo pygmaeus] 47 2e-004 ref|XP_645513.1| hypothetical protein DDB0216921 [Dictyoste... 47 2e-004 ref|NP_055885.2| KIAA0853 [Homo sapiens] >gi|30908950|gb|AA... 47 2e-004 >gb|EAA12654.3| ENSANGP00000018513 [Anopheles gambiae str. PEST] ref|XP_317676.2| ENSANGP00000018513 [Anopheles gambiae str. PEST] Length = 825
Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -2
R+RE E ERE DRDR R RE ERDR R+RERER Sbjct: 19 RDRERERERERDRDRDRERERERDRDRERERER 51 -------------------------------------------------- gnl|ti|818419342 name:POAA-aaa20j03.b1 mate_pair:820220478 (398 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAE70527.1| Hypothetical protein CBG17156 [Caenorhabdit... 100 3e-020 ref|NP_703411.1| hypothetical protein [Plasmodium falciparu... 84 2e-015 ref|NP_702308.1| hypothetical protein PF14_0419 [Plasmodium... 81 1e-014 ref|XP_799835.1| PREDICTED: hypothetical protein XP_794742 ... 79 5e-014 gb|AAN35489.1| hypothetical protein PF10_0292 [Plasmodium f... 76 3e-013 emb|CAC35733.1| cyclophilin-RNA interacting protein [Parame... 74 1e-012 ref|XP_636266.1| hypothetical protein DDB0188369 [Dictyoste... 74 1e-012 gb|AAC26930.1| Hypothetical protein F36H12.3 [Caenorhabditi... 74 2e-012 ref|XP_635459.1| hypothetical protein DDB0219636 [Dictyoste... 74 2e-012 gb|AAN37349.1| hypothetical protein PF14_0736 [Plasmodium f... 74 2e-012 >emb|CAE70527.1| Hypothetical protein CBG17156 [Caenorhabditis briggsae] Length = 376 Score = 99.8 bits (247), Expect = 3e-020 Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 1/113 (0%) Frame = -1
K+N N+KN ++ ++K KNQ KK+N KK+ +K+KNQ KK KK KK+KNQ Sbjct: 146 KKNQKNQKNQKNQKKNQKKKKNQKNQKKKKNQKKKKNRKKKNQKKKNQKKKNQKKKKNQK 205
K + N+K K +KNQ KN+ N+K QK + NQ Q+N KK Q+K+ NQ + KN+ Sbjct: 206 KKKKNQKNQKNQKNQ-KNQKNQKNQKNQKNQKNQKNQKKNQKKKKNQKKKKNQ 257 ------------------------------------------------------------------- gnl|ti|820220480 name:POAA-aaa20j11.g1 mate_pair:818419344 (679 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_642720.1| hypothetical protein DDB0217939 [Dictyoste... 64 3e-009 ref|XP_638271.1| hypothetical protein DDB0218710 [Dictyoste... 64 3e-009 ref|XP_641211.1| hypothetical protein DDB0205241 [Dictyoste... 62 2e-008 ref|XP_792971.1| PREDICTED: hypothetical protein XP_787878 ... 58 3e-007 ref|XP_643762.1| hypothetical protein DDB0167469 [Dictyoste... 55 2e-006 ref|XP_641074.1| hypothetical protein DDB0206068 [Dictyoste... 55 3e-006 ref|XP_647250.1| hypothetical protein DDB0202128 [Dictyoste... 52 1e-005 gb|AAX27763.1| SJCHGC01957 protein [Schistosoma japonicum] 52 2e-005 gb|AAX27911.1| unknown [Schistosoma japonicum] 52 2e-005 ref|XP_640250.1| hypothetical protein DDB0204172 [Dictyoste... 52 2e-005 >ref|XP_642720.1| hypothetical protein DDB0217939 [Dictyostelium discoideum] gb|AAO51215.1| hypothetical protein [Dictyostelium discoideum] gb|EAL68851.1| hypothetical protein DDB0217939 [Dictyostelium discoideum] Length = 798 Score = 64.3 bits (155), Expect = 3e-009 Identities = 32/56 (57%), Positives = 38/56 (67%) Frame = +2
N+ GGD PEAYE AL AK LSWS +KAFV+IGD++PH P+YT I W E Sbjct: 352 NTSGGDEPEAYEYALYRAKELSWS--EHTSKAFVMIGDSNPHEPTYTNLNINWFKE 405 -------------------------------------------------- gnl|ti|820220491 name:POAA-aaa20l11.g1 mate_pair:818419352 (756 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_885186.1| PREDICTED: similar to Syntaxin-10 (Syn10) ... 65 3e-009 ref|XP_872411.1| PREDICTED: similar to Syntaxin-10 (Syn10) ... 65 3e-009 gb|AAV48594.1| syntaxin 10 [Homo sapiens] 64 5e-009 ref|NP_003756.1| syntaxin 10 [Homo sapiens] >gi|48146337|em... 64 5e-009 gb|AAH17237.1| STX10 protein [Homo sapiens] 64 5e-009 gb|AAY18915.1| STX10 [synthetic construct] 64 5e-009 pir||JC5922 syntaxin 10 - human 64 5e-009 ref|XP_867165.1| PREDICTED: similar to Syntaxin-10 (Syn10) ... 63 9e-009 >ref|XP_885186.1| PREDICTED: similar to Syntaxin-10 (Syn10) isoform 4 [Bos taurus] Length = 200 Score = 64.7 bits (156), Expect = 3e-009 Identities = 32/66 (48%), Positives = 46/66 (69%) Frame = +2
+V+ EVQ++V LY RW EL++ ++ + +EL WTTN+LR G+ SIE D+ DLE Sbjct: 8 FVVRGEVQKAVNTARGLYQRWCELLQ--ESAVVGREELDWTTNELRNGLRSIEWDLEDLE 65
ETIGI+
Sbjct: 66 ETIGIV 71 -------------------------------------------- gnl|ti|818419358 name:POAA-aaa20n07.b1 mate_pair:820220500 (560 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_759408.1| hypothetical protein UM03261.1 [Ustilago m... 49 1e-004 gb|EAL22649.1| hypothetical protein CNBB0990 [Cryptococcus ... 47 5e-004 gb|AAW41659.1| conserved hypothetical protein [Cryptococcus... 47 5e-004 ref|XP_322258.1| hypothetical protein [Neurospora crassa] >... 46 6e-004 gb|EAA77616.1| hypothetical protein FG06680.1 [Gibberella z... 46 6e-004 gb|AAP31022.1| MesA [Emericella nidulans] 45 0.001 ref|XP_657872.1| hypothetical protein AN0268.2 [Aspergillus... 45 0.001 gb|EAL88004.1| conserved hypothetical protein [Aspergillus ... 45 0.001 ref|XP_359459.1| hypothetical protein MG05318.4 [Magnaporth... 44 0.002 ref|XP_500308.1| hypothetical protein [Yarrowia lipolytica]... 42 0.009 >ref|XP_759408.1| hypothetical protein UM03261.1 [Ustilago maydis 521] gb|EAK84188.1| hypothetical protein UM03261.1 [Ustilago maydis 521] Length = 914
Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +3
I ++N N + SAT + T F +LA+FDID+GS + HQYP PTG DE Sbjct: 3 ITEASNETNAATSATNKNSNGYCT--------FCMLAEFDIDRGSTLSHQYPAPTGYDEH 54
L+ Sbjct: 55 MLAELM 60 ----------------------- gnl|ti|820220508 name:POAA-aaa20p07.g1 mate_pair:818419364 (414 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_227461.2| PREDICTED: similar to histone protein Hist... 86 3e-016 ref|XP_794816.1| PREDICTED: similar to H3 histone, family 2... 85 7e-016 pir||JQ1984 H3.3 like histone MH321 - mouse 85 9e-016 ref|XP_876579.1| PREDICTED: similar to H3 histone, family 2... 84 1e-015 ref|XP_870095.1| PREDICTED: similar to histone 1, H2ai (pre... 84 1e-015 ref|XP_871849.1| PREDICTED: similar to H3 histone, family 2... 84 1e-015 ref|XP_871779.1| PREDICTED: similar to H3 histone, family 2... 84 1e-015 gb|AAZ72657.1| histone H3.3 [Craterostigma plantagineum] 84 1e-015 ref|XP_425464.1| PREDICTED: similar to histone protein Hist... 84 2e-015 ref|XP_416193.1| PREDICTED: similar to histone protein Hist... 84 2e-015 >ref|XP_227461.2| PREDICTED: similar to histone protein Hist2h3c1 [Rattus norvegicus] Length = 190 Score = 86.3 bits (212), Expect = 3e-016 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 3/92 (3%) Frame = -3
SP + VL SVS+++ QT T KAP+ +L A +K P++GG+K+PHR+RPG Sbjct: 41 SPRVLLVLVTSVSAMARTKQTA-RKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG 99
T+AL+EIRRYQKST+LLI KL F +LVREI Q Sbjct: 100 TVALREIRRYQKSTELLIRKLPFQRLVREIAQ 131 ------------------------------------------------ gnl|ti|818419369 name:POAA-aaa20p21.b1 mate_pair:820220514 (282 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_690771.1| PREDICTED: similar to DNA-dependent protei... 55 7e-007 ref|XP_789563.1| PREDICTED: similar to protein kinase, DNA-... 49 4e-005 ref|NP_008835.5| protein kinase, DNA-activated, catalytic p... 46 5e-004 ref|XP_519751.1| PREDICTED: hypothetical protein XP_519751 ... 46 5e-004 ref|XP_879315.1| PREDICTED: similar to protein kinase, DNA-... 46 5e-004 ref|XP_869847.1| PREDICTED: similar to protein kinase, DNA-... 46 5e-004 ref|XP_879134.1| PREDICTED: similar to protein kinase, DNA-... 46 5e-004 ref|XP_590310.2| PREDICTED: similar to protein kinase, DNA-... 46 5e-004 gb|AAC52019.2| DNA-PKcs [Homo sapiens] 46 5e-004 gb|AAC50210.3| DNA dependent protein kinase catalytic subun... 46 5e-004 >ref|XP_690771.1| PREDICTED: similar to DNA-dependent protein kinase catalytic subunit [Danio rerio] Length = 2714 Score = 55.1 bits (131), Expect = 7e-007 Identities = 31/84 (36%), Positives = 46/84 (54%) Frame = -3
++ KLDL + DE+ ++AS+ SSD T +L PN PKDF Sbjct: 592 IVEKLDLSVQKVSAADEVQ-------SDASAGIVLSSDP-------TANLMPNKPKDFIA 637
F+NLVDFC +LP+ P++F +W+ Sbjct: 638 FINLVDFCSELLPSRNPEYFAQWM 661 ----------------------------------------- gnl|ti|820221559 name:POAA-aaa21b20.b1 (899 letters) Score E Sequences producing significant alignments: (bits) Value gb|AAF19226.1| Highly similar to Ta1-3 polyprotein [Arabido... 80 1e-013 gb|AAQ01581.1| agCP7521-like protein [Aedes albopictus] 79 2e-013 ref|XP_471316.1| OSJNBa0032B23.6 [Oryza sativa (japonica cu... 75 4e-012 ref|XP_475562.1| putative polyprotein [Oryza sativa (japoni... 74 9e-012 gb|AAD32906.1| putative retroelement pol polyprotein [Arabi... 72 2e-011 ref|XP_761572.1| hypothetical protein UM05425.1 [Ustilago m... 66 1e-009 ref|XP_759335.1| hypothetical protein UM03188.1 [Ustilago m... 66 1e-009 ref|XP_762584.1| hypothetical protein UM06437.1 [Ustilago m... 65 2e-009 ref|XP_760555.1| hypothetical protein UM04408.1 [Ustilago m... 65 2e-009 ref|XP_760270.1| hypothetical protein UM04123.1 [Ustilago m... 64 9e-009 >gb|AAF19226.1| Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana] Length = 1356 Score = 79.7 bits (195), Expect = 1e-013 Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Frame = +3
WI+DSGCTSHM + + F+ Q + +T I G+ V G IR++ + + L N Sbjct: 308 WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKI-LEN 366
VP L NL+S LD+ Y +V+ ++ L L GLYV++ + + Sbjct: 367 VKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLSNGLYVLDGSTVMSE 426
L A + K WH RLGH+S+ LK + GK +E+ + C+ C +GK Sbjct: 427 LCNAETDKVKTALWHSRLGHMSMNNLKVLA-GKG---LIDRKEINELEFCEHCVMGK 479 -------------------------------------------- nl|ti|820221566 name:POAA-aaa21d14.b1 mate_pair:818423716 (905 letters) Score E
Sequences producing significant alignments: (bits) Value gb|EAA21669.1| hypothetical protein [Plasmodium yoelii yoelii] 50 8e-005 ref|XP_679442.1| conserved hypothetical protein [Plasmodium... 46 0.002 gb|AAA81668.1| ATPase subunit 6 44 0.010 pir||T31613 hypothetical protein Y50E8A.i - Caenorhabditis ... 44 0.010 emb|CAA39492.1| NADH dehydrogenase subunit 5 [Crithidia onc... 43 0.013 ref|XP_655822.1| villin-related protein [Entamoeba histolyt... 43 0.017 ref|NP_937899.1| NADH dehydrogenase subunit 6 [Strongyloide... 42 0.022 ref|XP_642518.1| hypothetical protein DDB0185018 [Dictyoste... 42 0.022 gb|EAN76693.1| hypothetical protein, conserved [Trypanosoma... 42 0.029 >gb|EAA21669.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 1107 Score = 50.4 bits (119), Expect = 8e-005 Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 10/256 (3%) Frame = +2
IN K K KKYK K ++I ITN I + I+ + NL I NK Sbjct: 331 INKIKKK-RKKYKEK-ERIFITNEKLDTAHIMQKKIINY------NLIIAK----IENKI 378
+ E+ +I K+NI +N ++K Y+ N+ K++ ++ Sbjct: 379 I--ELFEI----------KKNIYNNNYLLKYYVHNLFKVI-----------------VRN 409
INK + K K K ILQ K K E + Q+ K++ N + E I E+ E I+K+Q + Sbjct: 410 ICINKKEEKKKRKKILQEK-KNEILDQESKLIEKENEIKKEEQNIYEHNEQIEKDQTAI- 467
+EDFK I + + ++I I N + + E KK + +++ + +A Sbjct: 468 --------SEDFKEISEKYNKQLNNINDQMNDINNDIKELEKQIELKKIEKEKVMQIKAQ 519
E+ KE E+ N + KQ Sbjct: 520 LEKEKEEELKNISKKQ 535 --------------------------------- gnl|ti|818423717 name:POAA-aaa21d16.g1 mate_pair:820221567 (913 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_643223.1| hypothetical protein DDB0169416 [Dictyoste... 50 8e-005 gb|AAW42509.1| hypothetical protein CNC05910 [Cryptococcus ... 50 1e-004 emb|CAG88341.1| unnamed protein product [Debaryomyces hanse... 49 2e-004 emb|CAE04134.3| OSJNBa0009P12.21 [Oryza sativa (japonica cu... 48 4e-004 ref|NP_013323.1| Nucleolar protein, component of the small ... 47 0.001 ref|NP_568338.2| TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide b... 47 0.001 gb|AAM51294.1| putative WD40-repeat protein [Arabidopsis th... 47 0.001 gb|AAM53339.1| WD40-repeat protein [Arabidopsis thaliana] 47 0.001 ref|XP_720704.1| hypothetical protein CaO19_11744 [Candida ... 46 0.002 ref|XP_504667.1| hypothetical protein [Yarrowia lipolytica]... 44 0.008 >ref|XP_643223.1| hypothetical protein DDB0169416 [Dictyostelium discoideum] gb|AAS38643.1| similar to Arabidopsis thaliana (Mouse-ear cress). WD40-repeat protein [Dictyostelium discoideum] gb|EAL69288.1| hypothetical protein DDB0169416 [Dictyostelium discoideum] Length = 902 Score = 50.4 bits (119), Expect = 8e-005 Identities = 17/38 (44%), Positives = 33/38 (86%) Frame = +2
++P +L+ +IPYT++HF RID ++Q +Y++++TI+SI+ Sbjct: 804 EMPKLLESIIPYTDRHFQRIDKMLQKTYLIDFTIQSIN 841 --------------------------------------------------- gnl|ti|818423722 name:POAA-aaa21f06.g1 mate_pair:820221572 (598 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAF19226.1| Highly similar to Ta1-3 polyprotein [Arabido... 70 5e-011 dbj|BAA96887.1| copia-like retroelement pol polyprotein [Ar... 66 9e-010 emb|CAA37924.1| unnamed protein product [Arabidopsis thalia... 65 2e-009 gb|AAD26943.1| putative retroelement pol polyprotein [Arabi... 64 3e-009 emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 64 4e-009 emb|CAB79135.1| putative transposable element [Arabidopsis ... 63 7e-009 gb|AAL76004.1| putative gag-pol polyprotein [Zea mays] 62 1e-008 gb|AAC49502.1| Pol [Zea mays] 62 1e-008 ref|XP_471366.1| OSJNBb0052B05.12 [Oryza sativa (japonica c... 62 2e-008 ref|XP_475562.1| putative polyprotein [Oryza sativa (japoni... 62 2e-008 >gb|AAF19226.1| Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana] Length = 1356
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 3/140 (2%) Frame = +2
WI+DSGCTSHM + + F+ Q + +T I G+ V G IR++ + + L N Sbjct: 308 WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKI-LEN 366
VP L NL+S LD+ Y +V+ ++ L L GLYV++ + + Sbjct: 367 VKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLSNGLYVLDGSTVMSE 426
L A + K WH RLGH Sbjct: 427 LCNAETDKVKTALWHSRLGH 446 ------------------------------------- gnl|ti|820221577 name:POAA-aaa21f16.b1 mate_pair:818423726 (913 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_641265.1| hypothetical protein DDB0206401 [Dictyoste... 145 2e-033 ref|XP_645976.1| hypothetical protein DDB0190270 [Dictyoste... 42 0.030 ref|XP_675270.1| hypothetical protein PB103919.00.0 [Plasmo... 40 0.086 dbj|BAD93079.1| transforming growth factor, beta 2 variant ... 40 0.11 ref|XP_656949.1| hypothetical protein 6.t00068 [Entamoeba h... 39 0.33 gb|EAA21657.1| hypothetical protein [Plasmodium yoelii yoelii] 39 0.33 gb|AAR06973.1| transforming growth factor-beta 2 [Oryctolag... 38 0.43 ref|NP_701571.1| hypothetical protein PFL1045w [Plasmodium ... 38 0.43 ref|NP_782766.1| hypothetical protein CTC02218 [Clostridium... 38 0.43 ref|XP_514203.1| PREDICTED: similar to transforming growth ... 38 0.43 >ref|XP_641265.1| hypothetical protein DDB0206401 [Dictyostelium discoideum] gb|EAL67297.1| hypothetical protein DDB0206401 [Dictyostelium discoideum] Length = 616 Score = 145 bits (366), Expect = 2e-033 Identities = 85/225 (37%), Positives = 116/225 (51%) Frame = -3
+ EE+L+ + +L+ DL+ V ++W+RLCEDE + FR Sbjct: 233 LPEEVLVRIFKILNVEDLYKCYSVCSLWKRLCEDEAI---------------------FR 271
+C + YPCL+ I PP+E+SWR +Y RK+ F V+GGP SQ++CMD I C K L Sbjct: 272 KVCFRNYPCLKTYIRPPFENSWRKYYNLRKSSFLVLGGPTSQSSCMDDI---CAK----L 324
+ + F A LP L + Q Sbjct: 325 RSVGIGNVDSFYAQKRLPT----------------------LEELQ-------------- 348
+Y ++L+YSYNSSAFLDG MGD+L+DY+DNGGGVVVTVFTNCN Sbjct: 349 -KYTSILIYSYNSSAFLDGQLMGDVLSDYVDNGGGVVVTVFTNCN 392
Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = -2
IC+KLR+ G+ NVD +AQKR+PTL ELQKY Sbjct: 320 ICAKLRSVGIGNVDSFYAQKRLPTLEELQKY 350 --------------------------------------------------- gnl|ti|818423726 name:POAA-aaa21f16.g1 mate_pair:820221577 (581 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAX28662.1| histidine-rich protein II [Plasmodium falcip... 79 9e-014 gb|AAX28624.1| histidine-rich protein II [Plasmodium falcip... 78 2e-013 gb|AAX28678.1| histidine-rich protein II [Plasmodium falcip... 77 3e-013 gb|AAX28669.1| histidine-rich protein II [Plasmodium falcip... 77 3e-013 gb|AAX28692.1| histidine-rich protein II [Plasmodium falcip... 76 8e-013 gb|AAX28681.1| histidine-rich protein II [Plasmodium falcip... 76 8e-013 gb|AAX28666.1| histidine-rich protein II [Plasmodium falcip... 76 8e-013 gb|AAX28665.1| histidine-rich protein II [Plasmodium falcip... 76 8e-013 gb|AAX28685.1| histidine-rich protein II [Plasmodium falcip... 75 1e-012 gb|AAX28684.1| histidine-rich protein II [Plasmodium falcip... 75 1e-012 >gb|AAX28662.1| histidine-rich protein II [Plasmodium falciparum] Length = 236
Identities = 50/121 (41%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Frame = +1
A HH HH HH HH HH+H A + HAH+AS A HA A HA+ A HHAHH Sbjct: 110 ADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYA----HHAHH 165
++ A A A H AHHA+ H T A HA+ A H HA A T+ Sbjct: 166 AAD-AHHAADAHHA-TDAHHAHHAADAHHATDAHHAADAHHAAAHHATDAHHAAAHHATD 223
A Sbjct: 224 A 224 ----------------------------------------- gnl|ti|818423731 name:POAA-aaa21h04.g1 mate_pair:820221582 (809 letters) Score E Sequences producing significant alignments: (bits) Value Yüklə 3,49 Mb. Dostları ilə paylaş:
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