Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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Score = 60.1 bits (144), Expect = 1e-007 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 35/129 (27%) Frame = -2 Query: 351 DASSGKIEGKSRENRGKIEGKSRENRGKIEGKSR------------GNRGKIEGKSRGNR 208 D SG ++G+++E G +GK E +G+ +GK++ GN G ++GK++ Sbjct: 107 DNQSGGLKGEAKEAWGDAKGKVEELKGQAQGKAQELKGEAKDAINSGNTGDLKGKAKEAW 166
G+ +GK+ GN GE++GK++ GE++G A++ GK++ Sbjct: 167 GDAKGKAHEVAGEAKGKAHEVAGDAKNAANSGNAGELQGKAKEAWGEAKGDAKDLAGKAK 226
GKA +G+
Sbjct: 227 GKAEELKGD 235 Score = 57.4 bits (137), Expect = 7e-007 Identities = 29/101 (28%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Frame = -2 Query: 369 NLYKNKDASSGKIEGKSRENRGKIEGKSRENRGKIEGKSRGNRGKIEGKSRGNRGEI-EG 193 +L + + ++GK G ++G+++E G +GK +G+ +GK++ +GE + Sbjct: 90 DLQSEAEDKAHDLKGKVDNQSGGLKGEAKEAWGDAKGKVEELKGQAQGKAQELKGEAKDA 149
+ GN G+++GK++ G+++GKA E G+++GKA G+ Sbjct: 150 INSGNTGDLKGKAKEAWGDAKGKAHEVAGEAKGKAHEVAGD 190 Score = 52.0 bits (123), Expect = 3e-005 Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 19/110 (17%) Frame = -2 Query: 342 SGKIEGKSRENRGKIEGKSRENRGKIEGKSRGNRGKIEGKSRGNRG-------------- 205 S +++GK +E +GK+++ + + E K+ +GK++ +S G +G Sbjct: 70 SNQLDGKIKEVWESAKGKAQDLQSEAEDKAHDLKGKVDNQSGGLKGEAKEAWGDAKGKVE 129
E++G+++G E++G+++ G G+ +GKA+E G ++GKA GE Sbjct: 130 ELKGQAQGKAQELKGEAKDAINSGNTGDLKGKAKEAWGDAKGKAHEVAGE 179 Score = 51.6 bits (122), Expect = 4e-005 Identities = 28/97 (28%), Positives = 59/97 (60%), Gaps = 7/97 (7%) Frame = -1 Query: 319 EGKSRENRGKIEGKSRENRGEIEGKSRENRGEIEGKSRGNRGEIEGKSRGNRGEIE---G 149 + KS+ + +++GK +E +GK+++ + E E K+ +G+++ +S G +GE + G Sbjct: 63 QAKSKLDSNQLDGKIKEVWESAKGKAQDLQSEAEDKAHDLKGKVDNQSGGLKGEAKEAWG 122
A+GK +G+++GKA+E +GE++ N+ L+ Sbjct: 123 DAKGKVEELKGQAQGKAQELKGEAKDAINSGNTGDLK 159 -------------------------------------------------------- gnl|ti|818421851 name:POAA-aaa22c01.g1 mate_pair:818422891 (870 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00768460.1| Polymorphic membrane protein, Chlamydia ... 73 1e-011 emb|CAD73746.1| probable extracellular nuclease [Rhodopirel... 70 1e-010 emb|CAD71661.1| probable polymorphic membrane protein B/C f... 66 2e-009 ref|YP_325217.1| Polymorphic membrane protein [Anabaena var... 61 4e-008 ref|ZP_00672674.1| Hemolysin-type calcium-binding region:Po... 58 5e-007 ref|ZP_00514059.1| Polymorphic membrane protein, Chlamydia ... 57 1e-006 ref|ZP_00767677.1| Polymorphic membrane protein, Chlamydia ... 52 2e-005 ref|YP_113268.1| hypothetical protein MCA0765 [Methylococcu... 51 5e-005 ref|ZP_00767151.1| Polymorphic membrane protein, Chlamydia ... 49 2e-004 ref|ZP_00665858.1| Low-density lipoprotein receptor, YWTD r... 49 2e-004 >ref|ZP_00768460.1| Polymorphic membrane protein, Chlamydia [Chloroflexus aurantiacus J-10-fl] gb|EAO58417.1| Polymorphic membrane protein, Chlamydia [Chloroflexus aurantiacus J-10-fl] Length = 729 Score = 72.8 bits (177), Expect = 1e-011 Identities = 61/202 (30%), Positives = 85/202 (42%), Gaps = 2/202 (0%) Frame = -1
N L+ A G G I + T T T N + G Y NAGT + Sbjct: 158 NSVLSNNAAGFGAG--IDNTGTLTITNSTFSNNAATTSGGGIY--NAGT------LTITN 207
+ N G G + + TI ++T+SNN+ G Y GTL +TN +SNN Sbjct: 208 SSFSNNAATISGGGISNDTNGTLTITNNTLSNNMADYGAGIYNDTNGTLTITNSTLSNNI 267
A GG M++ G+ ITNS NQ A GG Y L + N + + N A Sbjct: 268 ASNSGGG---MYNSGTLTITNSTFSTNQTGAFDGGGIYN---QGALTIANSTFSNNIATN 321
GGG I+ ++ +T+S N Sbjct: 322 GGG--IYNANALTVTNSTFEGN 341 --------------------------------------- gnl|ti|818421859 name:POAA-aaa22c17.g1 mate_pair:818422897 (199 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_328512.1| predicted protein [Neurospora crassa] >gi|... 45 6e-004 gb|EAL85479.1| hypothetical protein Afu8g07190 [Aspergillus... 39 0.043 ref|XP_682432.1| hypothetical protein AN9163.2 [Aspergillus... 37 0.21 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 0.82 >ref|XP_328512.1| predicted protein [Neurospora crassa] gb|EAA29156.1| predicted protein [Neurospora crassa] Length = 208 Score = 45.4 bits (106), Expect = 6e-004 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = +3
A LAE HLQHDL ++R L KAA KVS H T+G Sbjct: 14 ADLAEHHLQHDLQPEDRERLRKAASKVSTHTTIG 47 --------------------------------------------------- gnl|ti|818421867 name:POAA-aaa22e09.g1 (558 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_647496.1| 3-methyl-2-oxobutanoate dehydrogenase (lip... 62 1e-008 gb|EAN34194.1| pyruvate dehydrogenase E1 component beta sub... 57 4e-007 ref|NP_175947.1| BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID... 56 6e-007 ref|NP_187954.1| DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobut... 56 6e-007 gb|AAC64005.1| branched-chain alpha-keto acid decarboxylase... 56 6e-007 gb|AAA51410.1| branched chain alpha-keto acid dehydrogenase... 56 6e-007 ref|XP_532213.2| PREDICTED: similar to 2-oxoisovalerate deh... 56 8e-007 dbj|BAE37825.1| unnamed protein product [Mus musculus] 56 8e-007 ref|NP_989988.1| branched chain keto acid dehydrogenase E1,... 56 8e-007 ref|XP_698495.1| PREDICTED: similar to branched chain ketoa... 56 8e-007 >ref|XP_647496.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Dictyostelium discoideum] gb|EAL73463.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Dictyostelium discoideum] Length = 370
Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = +2
RCFL LEAPI RVCGYDTPFPL+FEKFYV Sbjct: 326 RCFLHLEAPIQRVCGYDTPFPLIFEKFYV 354 ----------------------------------------------- gnl|ti|818421872 name:POAA-aaa22e19.g1 mate_pair:818422908 (554 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_645920.1| hypothetical protein DDB0190219 [Dictyoste... 60 3e-008 gb|EAL26077.1| GA14870-PA [Drosophila pseudoobscura] 56 7e-007 gb|EAL26076.1| GA14286-PA [Drosophila pseudoobscura] 56 7e-007 gb|AAT94450.1| RE35187p [Drosophila melanogaster] 55 1e-006 ref|NP_725292.1| CG17034-PC, isoform C [Drosophila melanoga... 55 1e-006 ref|NP_725290.1| CG17034-PA, isoform A [Drosophila melanoga... 55 1e-006 ref|NP_610873.1| CG17034-PD, isoform D [Drosophila melanoga... 55 1e-006 gb|EAL23235.1| hypothetical protein CNBA3510 [Cryptococcus ... 54 3e-006 gb|AAW40884.1| calcium transporting ATPase, putative [Crypt... 54 3e-006 ref|XP_420729.1| PREDICTED: similar to chromaffin granule A... 54 4e-006 >ref|XP_645920.1| hypothetical protein DDB0190219 [Dictyostelium discoideum] gb|EAL72040.1| hypothetical protein DDB0190219 [Dictyostelium discoideum] Length = 1313 Score = 60.5 bits (145), Expect = 3e-008 Identities = 26/43 (60%), Positives = 35/43 (81%) Frame = -3
IYG VVY G++TKLMQN+T PSKR+TLE+ NRAL+ +F ++ Sbjct: 394 IYGAVVYTGEDTKLMQNSTDAPSKRSTLEKLVNRALINLFIIM 436 ---------------------------------------------------------- gnl|ti|818422914 name:POAA-aaa22g09.b1 mate_pair:818421879 (479 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAB70843.1| FusC [Dictyostelium discoideum] 51 2e-005 ref|XP_635782.1| hypothetical protein DDB0191539 [Dictyoste... 51 2e-005 dbj|BAB17273.1| DdFRP1alpha [Dictyostelium discoideum] 51 2e-005 ref|XP_635781.1| cell surface glycoprotein gp138 [Dictyoste... 50 3e-005 gb|EAL42113.1| ENSANGP00000027099 [Anopheles gambiae str. P... 47 2e-004 emb|CAA47841.1| S-layer protein [Clostridium thermocellum] ... 47 2e-004 ref|ZP_00510057.1| S-layer protein (SLH domain) [Clostridiu... 47 2e-004 ref|ZP_00474216.1| TonB, C-terminal [Chromohalobacter salex... 46 4e-004 ref|XP_637316.1| hypothetical protein DDB0215889 [Dictyoste... 46 5e-004 ref|XP_636807.1| hypothetical protein DDB0187866 [Dictyoste... 46 5e-004 >gb|AAB70843.1| FusC [Dictyostelium discoideum] Length = 632
Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = +1
L+ GG + + E+ E + + S +P TPSTTP +TP TP TTP ++P + + Sbjct: 543 LNVGGYAVNLVVEYIEGGETPTPSTTPSTTPSTTPSTTPSITPSTTPSTTPSTTPSSAPT 602
S D+G
Sbjct: 603 QSPGDDG 609 Score = 40.8 bits (94), Expect = 0.016 Identities = 20/45 (44%), Positives = 27/45 (60%) Frame = +1 Query: 196 SSSSSCSPFPTPSTTPRSTPHTTPDTTPPSSPESESTGKSRGSSS 330 S++ S +P TPSTTP +TP TTP + P SP + + S S S Sbjct: 574 STTPSTTPSITPSTTPSTTPSTTPSSAPTQSPGDDGSTSSTLSIS 618 ---------------------------------------------- gnl|ti|818422915 name:POAA-aaa22g11.b1 mate_pair:818421880 (245 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_393890.1| PREDICTED: similar to CG3238-PA [Apis mell... 60 2e-008 ref|XP_449255.1| unnamed protein product [Candida glabrata]... 59 4e-008 gb|AAS52811.1| AER128Wp [Ashbya gossypii ATCC 10895] >gi|45... 57 2e-007 ref|XP_718694.1| hypothetical protein CaO19_7538 [Candida a... 57 3e-007 emb|CAA86260.1| PIF1 [Saccharomyces cerevisiae] 55 6e-007 ref|NP_013650.1| DNA helicase involved in telomere formatio... 55 6e-007 emb|CAA28953.1| unnamed protein product [Saccharomyces cere... 55 6e-007 gb|EAA12248.2| ENSANGP00000010202 [Anopheles gambiae str. P... 55 8e-007 ref|XP_664499.1| hypothetical protein AN6895.2 [Aspergillus... 54 1e-006 gb|AAW45116.1| mitochondrial DNA repair and recombination p... 54 2e-006 >ref|XP_393890.1| PREDICTED: similar to CG3238-PA [Apis mellifera] Length = 618
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 7/50 (14%) Frame = -2
RKT +L I G+ FDK+E +AR +RKNERPFG IQ+ILCGDFFQ+ Sbjct: 287 RKTKHLIIDEISMVDGDYFDKIEAVARHIRKNERPFGGIQLILCGDFFQL 336 -------------------------------------------------------------------- gnl|ti|818421886 name:POAA-aaa22i03.g1 (835 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_691455.1| PREDICTED: similar to HECT domain containi... 147 6e-034 ref|XP_789417.1| PREDICTED: similar to zn-finger, CCHC type... 145 2e-033 ref|XP_789386.1| PREDICTED: similar to zn-finger, CCHC type... 145 2e-033 ref|XP_780950.1| PREDICTED: similar to Retrovirus-related P... 145 2e-033 ref|XP_698731.1| PREDICTED: similar to Potential helicase M... 142 2e-032 ref|XP_685606.1| PREDICTED: similar to LReO_3 [Danio rerio] 138 2e-031 ref|XP_685352.1| PREDICTED: similar to LReO_3 [Danio rerio] 138 2e-031 gb|AAG37039.1| polyprotein [Dictyostelium discoideum] 138 3e-031 ref|XP_641178.1| hypothetical protein DDB0218238 [Dictyoste... 138 3e-031 ref|XP_628775.1| hypothetical protein DDB0215111 [Dictyoste... 138 3e-031 >ref|XP_691455.1| PREDICTED: similar to HECT domain containing 2 isoform a [Danio rerio]
Length = 1798 Score = 147 bits (370), Expect = 6e-034 Identities = 78/197 (39%), Positives = 110/197 (55%) Frame = +2
LG KT +I +WP + I+ +V C +C K + AG LQ + +++G Sbjct: 1476 LGIYKTYQRIHHVAFWPAMWTSIKTYVKRCVRCQTLKNESRKPAGKLQQTTTTRPNEMLG 1535
+D GP P + + +L F D++S+WVELF ++ T + VAK E+I+ R G ++ Sbjct: 1536 VDIMGPFPCSPRRSQYLLVFVDYYSRWVELFPMRDATAQTVAKFFREEILTRWGVPDFIL 1595
SDRG F S I EV K +KIK+ TTA+HPQ N TE+ N L M++ Y D+ H WD Sbjct: 1596 SDRGTQFTSAIFSEVCKKWKIKQKMTTAYHPQTN-LTERVNRTLKQMISSYVDDNHKKWD 1654
YLP F NSAV ET Sbjct: 1655 QYLPEFRFAINSAVQET 1671 ------------------------------------ gnl|ti|818421889 name:POAA-aaa22i11.g1 mate_pair:818422923 (318 letters) Score E
Sequences producing significant alignments: (bits) Value dbj|BAE21155.1| unnamed protein product [Mus musculus] >gi|... 50 2e-005 ref|XP_637240.1| hypothetical protein DDB0187422 [Dictyoste... 50 2e-005 ref|NP_038796.1| SKB1 homolog [Mus musculus] >gi|23271482|g... 50 2e-005 ref|XP_344406.2| PREDICTED: similar to SKB1 homolog [Rattus... 50 2e-005 gb|AAF04503.1| protein methyltransferase [Mus musculus] 50 2e-005 ref|XP_464084.1| putative kinase-binding protein 1 [Oryza s... 49 6e-005 ref|XP_707136.1| PREDICTED: similar to SKB1 homolog isoform... 49 7e-005 ref|XP_707135.1| PREDICTED: similar to SKB1 homolog isoform... 49 7e-005 ref|XP_707134.1| PREDICTED: similar to SKB1 homolog isoform... 49 7e-005 gb|AAH95362.1| Skb1 protein [Danio rerio] 49 7e-005 >dbj|BAE21155.1| unnamed protein product [Mus musculus] dbj|BAE38057.1| unnamed protein product [Mus musculus] Length = 637 Score = 50.4 bits (119), Expect = 2e-005 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 6/59 (10%) Frame = +3
+++RY L F V +NT LHGFAGYF+ LY+D+ +S+ P + +P+F P P Sbjct: 531 DNNRYCTLEFPVEVNTVLHGFAGYFETVLYRDITLSIRPETHSPGMFSWFPIFFPIKQP 589 -------------------------------------------------------------------- gnl|ti|818422924 name:POAA-aaa22i13.b1 (444 letters) Score E Sequences producing significant alignments: (bits) Value ref|XP_640629.1| hypothetical protein DDB0214908 [Dictyoste... 75 9e-013 ref|XP_793896.1| PREDICTED: similar to FKBP12-rapamycin com... 46 5e-004 ref|XP_785940.1| PREDICTED: similar to FKBP12-rapamycin com... 46 5e-004 emb|CAG30554.1| TorA protein [Emericella nidulans] 44 0.002 ref|XP_663586.1| hypothetical protein AN5982.2 [Aspergillus... 44 0.002 emb|CAA22805.1| SPBC646.01c [Schizosaccharomyces pombe] 44 0.002 ref|NP_001018784.1| hypothetical protein SPBC646.01c [Schiz... 44 0.002 sp|Q9Y7K2|TOR2_SCHPO Phosphatidylinositol 3-kinase tor2 (PI... 44 0.002 gb|EAL93322.1| phosphatidylinositol 3-kinase, putative [Asp... 42 0.009 dbj|BAE06077.1| FRAP1 variant protein [Homo sapiens] 40 0.026 >ref|XP_640629.1| hypothetical protein DDB0214908 [Dictyostelium discoideum] gb|AAO43977.1| Tor [Dictyostelium discoideum] gb|EAL66546.1| hypothetical protein DDB0214908 [Dictyostelium discoideum] Length = 2380 Score = 74.7 bits (182), Expect = 9e-013 Identities = 35/44 (79%), Positives = 40/44 (90%) Frame = -3
+DELID+DYDENATK+TRLANYLRIGL +D TVM MASKALG+ Sbjct: 83 IDELIDVDYDENATKITRLANYLRIGLGFNDFTVMLMASKALGR 126 Score = 47.0 bits (110), Expect = 2e-004 Identities = 23/26 (88%), Positives = 23/26 (88%) Frame = -1 Query: 243 GRLARSSGALTAECVEFEVKRALEWL 166 GRLARSSG LTAE VEFEV RALEWL Sbjct: 125 GRLARSSGTLTAEFVEFEVTRALEWL 150 ---------------------------------------------- gnl|ti|818422932 name:POAA-aaa22k15.b1 mate_pair:818421898 (683 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_712087.1| hypothetical protein CaO19.1074 [Candida a... 66 1e-009 ref|XP_643873.1| hypothetical protein DDB0203319 [Dictyoste... 58 3e-007 ref|XP_502130.1| hypothetical protein [Yarrowia lipolytica]... 56 1e-006 ref|XP_670126.1| hypothetical protein PB400116.00.0 [Plasmo... 56 1e-006 ref|NP_700545.1| rhoGAP protein [Plasmodium falciparum 3D7]... 55 3e-006 emb|CAC42230.1| Krueppel-like protein [Plasmodium falciparu... 54 3e-006 dbj|BAC86958.1| unnamed protein product [Homo sapiens] 53 8e-006 gb|AAW26857.1| SJCHGC01974 protein [Schistosoma japonicum] 53 1e-005 gb|ABA40774.1| SJCHGC01971 protein [Schistosoma japonicum] 51 3e-005 ref|XP_646781.1| hypothetical protein DDB0191040 [Dictyoste... 50 8e-005 >ref|XP_712087.1| hypothetical protein CaO19.1074 [Candida albicans SC5314] ref|XP_712061.1| hypothetical protein CaO19.8674 [Candida albicans SC5314] gb|EAK92891.1| hypothetical protein CaO19.1074 [Candida albicans SC5314] gb|EAK92864.1| hypothetical protein CaO19.8674 [Candida albicans SC5314] Length = 122 Score = 65.9 bits (159), Expect = 1e-009 Identities = 29/43 (67%), Positives = 35/43 (81%) Frame = +1
++ + IYLFIYLFIYLFIYLFIYLFIY FIYLF F++ L+ Sbjct: 10 QFIYLFIYLFIYLFIYLFIYLFIYLFIYLFIYLFIYLFIYLLA 52 ------------------------------------------------------------ gnl|ti|818421898 name:POAA-aaa22k15.g1 mate_pair:818422932 (518 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_626647.1| hypothetical protein cgd3_620 [Cryptospori... 47 3e-004 gb|AAB59222.1| ORF2 bases 1807-2850; first start codon at 2... 47 4e-004 ref|XP_502130.1| hypothetical protein [Yarrowia lipolytica]... 45 0.001 ref|XP_682005.1| hypothetical protein AN8736.2 [Aspergillus... 42 0.009 ref|XP_720764.1| hypothetical protein CaO19_11807 [Candida ... 42 0.009 ref|YP_301537.1| signal transduction histidine kinase [Stap... 42 0.012 ref|XP_720636.1| hypothetical protein CaO19_4331 [Candida a... 41 0.015 pir||T31613 hypothetical protein Y50E8A.i - Caenorhabditis ... 41 0.015 emb|CAA33190.1| unnamed protein product [Crithidia fascicul... 40 0.034 ref|YP_073317.1| NADH dehydrogenase subunit 6 [Neomaskellia... 40 0.045 >ref|XP_626647.1| hypothetical protein cgd3_620 [Cryptosporidium parvum] gb|EAK89294.1| hypothetical protein with signal peptide [Cryptosporidium parvum] Length = 242 Score = 47.0 bits (110), Expect = 3e-004 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 3/85 (3%) Frame = -1
+FFI FL F+F+LL IL F + V+FI L F+ L + FF + LFFL F Sbjct: 77 LFFILFFLRFLFVLLFILCHLFILHLLFVLFILCLLFIFLFI--LCLLFFIRFLFFLRFL 134
F+L + + I +++V+FI+ L F Sbjct: 135 FVLFILCHLFILHLLFVLFIICLLF 159 ------------------------------------------ gnl|ti|818421906 name:POAA-aaa22m07.g1 mate_pair:818422939 (350 letters) Score E
Sequences producing significant alignments: (bits) Value ref|NP_611021.1| CG11808-PA [Drosophila melanogaster] >gi|7... 45 6e-004 ref|NP_572704.1| CG1657-PA [Drosophila melanogaster] >gi|22... 44 0.001 ref|NP_729084.1| CG5406-PB, isoform B [Drosophila melanogas... 44 0.002 ref|XP_366568.1| hypothetical protein MG02644.4 [Magnaporth... 44 0.002 sp|P91621|SIF1_DROME Still life protein type 1 (SIF type 1)... 44 0.002 gb|EAA77103.1| hypothetical protein FG06793.1 [Gibberella z... 43 0.003 ref|NP_728172.2| CG32547-PA [Drosophila melanogaster] >gi|6... 43 0.004 ref|XP_643783.1| hypothetical protein DDB0167447 [Dictyoste... 43 0.004 ref|XP_636783.1| hypothetical protein DDB0187906 [Dictyoste... 43 0.004 emb|CAE57254.1| Hypothetical protein CBG00134 [Caenorhabdit... 43 0.004 >ref|NP_611021.1| CG11808-PA [Drosophila melanogaster] gb|AAF58162.1| CG11808-PA [Drosophila melanogaster] gb|AAL39210.1| GH08125p [Drosophila melanogaster] Length = 219
Identities = 20/38 (52%), Positives = 26/38 (68%) Frame = -1
+D+ RERDRDRDRER+RER+R+ H S +R S Sbjct: 9 RDRDRERDRDRDRERDRERDRDRRHRSKSPSRSSRQVS 46 -------------------------------------------------------- gnl|ti|818421918 name:POAA-aaa22o11.g1 mate_pair:818422950 (680 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB70843.1| FusC [Dictyostelium discoideum] 52 2e-005 ref|XP_635782.1| hypothetical protein DDB0191539 [Dictyoste... 52 2e-005 dbj|BAB17273.1| DdFRP1alpha [Dictyostelium discoideum] 52 2e-005 ref|XP_635781.1| cell surface glycoprotein gp138 [Dictyoste... 51 4e-005 emb|CAA47841.1| S-layer protein [Clostridium thermocellum] ... 50 6e-005 ref|ZP_00510057.1| S-layer protein (SLH domain) [Clostridiu... 50 6e-005 gb|EAL42113.1| ENSANGP00000027099 [Anopheles gambiae str. P... 48 3e-004 dbj|BAD37625.1| putative protein kinase [Oryza sativa (japo... 47 7e-004 ref|XP_637316.1| hypothetical protein DDB0215889 [Dictyoste... 46 0.001 ref|XP_635777.1| cell surface glycoprotein gp138 [Dictyoste... 46 0.001 >gb|AAB70843.1| FusC [Dictyostelium discoideum] Length = 632 Score = 52.0 bits (123), Expect = 2e-005 Identities = 25/69 (36%), Positives = 38/69 (55%) Frame = -3
L L+ GG + + E+ E + + S +P TPSTTP +TP TP TTP ++P + + Sbjct: 541 LTLNVGGYAVNLVVEYIEGGETPTPSTTPSTTPSTTPSTTPSITPSTTPSTTPSTTPSSA 600
S D+G
Sbjct: 601 PTQSPGDDG 609 Score = 33.5 bits (75), Expect = 6.2 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -3 Query: 300 SSSSSRSPFPTPSTTPRSTPHTTPDTTPPSSPESEST 190 S++ S +P TPSTTP +TP + P +P + ST Sbjct: 578 STTPSITPSTTPSTTPSTTPSSAPTQSPGDDGSTSST 614 ------------- gnl|ti|818421922 name:POAA-aaa22o19.g1 mate_pair:818422954 (871 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB69740.1| Yhr217cp [Saccharomyces cerevisiae] >gi|7315... 53 1e-005 gb|AAH95744.1| Integrin, beta-like 1 [Danio rerio] >gi|6657... 50 1e-004 dbj|BAC05084.1| unnamed protein product [Homo sapiens] 47 7e-004 dbj|BAC04906.1| unnamed protein product [Homo sapiens] 47 9e-004 dbj|BAC34884.1| unnamed protein product [Mus musculus] 47 9e-004 gb|AAA45797.1| latency associated transcript (LAT) ORF-2 47 0.001 Yüklə 3,49 Mb. Dostları ilə paylaş:
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