Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
|
|
ref|NP_297344.1| hypothetical protein XF0051 [Xylella fasti... 46 0.001 ref|XP_498421.1| PREDICTED: FLJ40198 protein [Homo sapiens] 46 0.002 ref|ZP_00765672.1| hypothetical protein CaurDRAFT_1334 [Chl... 46 0.002 gb|AAO51859.1| similar to Homo sapiens (Human). Mucin 2 pre... 45 0.003 >gb|AAB69740.1| Yhr217cp [Saccharomyces cerevisiae] sp|P38898|YH17_YEAST Hypothetical 17.1 kDa protein in PUR5 3'region pir||S48998 hypothetical protein YHR217c - yeast (Saccharomyces cerevisiae) Length = 153 Score = 53.1 bits (126), Expect = 1e-005 Identities = 36/87 (41%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Frame = +3
P PH PHT TH HPHTP +PH +T HPHT+ T T HT T+L L Sbjct: 22 PHPHPHPHPHTPTHTHPHTPTPTPHPHPHTPHPHTTPTPTPHHTHTPHTTLSNLS----- 76
+ SH P++ L TL H P P Sbjct: 77 ----LNLPSHYPTSPLVTLPHSTIPLP 99
Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 10/106 (9%) Frame = +1
S +YS +H + H H HT HT PHT PT H T P P P+ +T Sbjct: 11 SMQYSDIYIHTPHP-HPHPHPHTPTHTHPHTPTPTP---HPHPHTPHPHTTPTPTPHHTH 66
H + VT PH +ST YY PP Sbjct: 67 TPHTTLSNLSLNLPSHYPTSPLVTLPHSTIPLPTTIHLSTYYYHPP 112 ---------------------- gnl|ti|818421765 name:POAA-aaa23a12.g1 (563 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAF95253.1| unnamed protein product [Tetraodon nigrovir... 46 6e-004 ref|XP_474150.1| OSJNBa0060D06.9 [Oryza sativa (japonica cu... 43 0.007 emb|CAD37020.1| related to kinetoplast-associated protein K... 42 0.015 gb|AAO25619.1| protein kinase lysine deficient 4 [Mus muscu... 41 0.026 ref|XP_329982.1| hypothetical protein [Neurospora crassa] >... 41 0.026 ref|NP_783569.1| WNK lysine deficient protein kinase 4 [Mus... 41 0.026 gb|AAH43677.1| Wnk4 protein [Mus musculus] 41 0.026 gb|AAH26591.1| Wnk4 protein [Mus musculus] 41 0.026 gb|AAH26679.1| Wnk4 protein [Mus musculus] 41 0.026 ref|XP_488110.1| PREDICTED: hypothetical protein XP_488110 ... 40 0.057 >emb|CAF95253.1| unnamed protein product [Tetraodon nigroviridis] Length = 1017 Score = 46.2 bits (108), Expect = 6e-004 Identities = 42/111 (37%), Positives = 49/111 (44%), Gaps = 20/111 (18%) Frame = +2
H + S ST PTLP LL+ Y PS LP P L+ P P+ S Sbjct: 336 HPSCSSSTNPTLPAPPLQTPPFLLLLYKPHPSCSSTNPTLPAPLQTPPFLLLYKPHPSCS 395
S LP L PP +L Y PH P CS+S NP +P L T LLQ Sbjct: 396 SSTNPTLPAPLQTPPFLLLLYKPH---PSCSSSTNPTLPAPPLQTPPFLLQ 443 ---------------- gnl|ti|818422828 name:POAA-aaa23c20.b1 mate_pair:818421780 (680 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAW31855.1| tousled-like protein kinase [Triticum aestivum] 64 3e-009 ref|NP_568405.1| TSL (TOUSLED); kinase [Arabidopsis thalian... 64 4e-009 gb|AAW31856.1| tousled-like protein kinase [Triticum aestivum] 61 3e-008 emb|CAI47005.1| putative protein kinase tousled [Cabomba aq... 57 5e-007 ref|XP_469759.1| putative protein kinase [Oryza sativa] >gi... 57 7e-007 gb|AAT66019.1| tousled-like kinase 1 [Zea mays] 54 6e-006 gb|AAR35033.1| tousled-like kinase 2 [Zea mays] 53 1e-005 gb|AAX69240.1| protein kinase, putative [Trypanosoma brucei... 52 1e-005 ref|XP_793467.1| PREDICTED: similar to Serine/threonine-pro... 52 2e-005 ref|NP_996343.3| CG32782-PD, isoform D [Drosophila melanoga... 51 4e-005 >gb|AAW31855.1| tousled-like protein kinase [Triticum aestivum] Length = 677 Score = 64.3 bits (155), Expect = 3e-009 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%) Frame = -1
G + T H +SS NG L N D E R ++A Sbjct: 141 GRGSKTVDQTRHTSASSVTVSNGQHDKLTNMDSRTSVLPGNDDRTALHEELSLLRGKVAF 200
+E+ L + ++ E+ LKDF+ + QQK ++ K L++ L+ ++AER Sbjct: 201 LEEELNKSRQEVTEYHQLSDRLAKELKDFKDQDQQKKSKQMKVLSDL----LIAVSKAER 256
AR KL ++ R G R G + E W+DG+ + ++ +K+L++ +EA+E +K L Sbjct: 257 QEARMKLKQESFRLGNIGVMRAGTVISETWEDGQAIKDLNAHLKSLLETKEAVERHRKSL 316 --------------------- gnl|ti|818421780 name:POAA-aaa23c20.g1 mate_pair:818422828 (639 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAW31855.1| tousled-like protein kinase [Triticum aestivum] 61 2e-008 ref|NP_568405.1| TSL (TOUSLED); kinase [Arabidopsis thalian... 61 2e-008 gb|AAW31856.1| tousled-like protein kinase [Triticum aestivum] 58 2e-007 ref|XP_469759.1| putative protein kinase [Oryza sativa] >gi... 54 5e-006 emb|CAI47005.1| putative protein kinase tousled [Cabomba aq... 52 1e-005 gb|AAT66019.1| tousled-like kinase 1 [Zea mays] 50 4e-005 gb|AAX69240.1| protein kinase, putative [Trypanosoma brucei... 50 7e-005 gb|AAR35033.1| tousled-like kinase 2 [Zea mays] 50 7e-005 ref|XP_793467.1| PREDICTED: similar to Serine/threonine-pro... 48 3e-004 emb|CAH03649.1| Serine/threonine protein kinase tousled-lik... 46 8e-004 >gb|AAW31855.1| tousled-like protein kinase [Triticum aestivum] Length = 677 Score = 61.2 bits (147), Expect = 2e-008 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 15/179 (8%) Frame = +3
G + T H +SS NG L N D E R ++A Sbjct: 141 GRGSKTVDQTRHTSASSVTVSNGQHDKLTNMDSRTSVLPGNDDRTALHEELSLLRGKVAF 200
+E+ L + ++ E+ LKDF+ + QQK ++ K L++ L+ ++AER Sbjct: 201 LEEELNKSRQEVTEYHQLSDRLAKELKDFKDQDQQKKSKQMKVLSDL----LIAVSKAER 256
AR KL ++ R G R G + E W+DG+ + ++ +K+L++ +EA+E +++ Sbjct: 257 QEARMKLKQESFRLGNIGVMRAGTVISETWEDGQAIKDLNAHLKSLLETKEAVERHRKS 315 ------------- gnl|ti|818421791 name:POAA-aaa23e22.g1 mate_pair:818422837 (888 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAA31881.1| A 'c' was inserted after nt 369 (=nt 10459 i... 63 2e-008 emb|CAA33190.1| unnamed protein product [Crithidia fascicul... 59 3e-007 pir||E22845 hypothetical protein 4 - Trypanosoma brucei mit... 52 4e-005 ref|NP_050068.1| hypothetical protein LetaoMp15 [Leishmania... 50 1e-004 ref|XP_502130.1| hypothetical protein [Yarrowia lipolytica]... 49 2e-004 gb|AAC38975.1| NADH dehydrogenase subunit 5 [Bodo saltans] 48 4e-004 dbj|BAC86958.1| unnamed protein product [Homo sapiens] 47 9e-004 gb|AAB59222.1| ORF2 bases 1807-2850; first start codon at 2... 46 0.001 gb|AAD28358.1| MURF1 [Phytomonas serpens] 45 0.003 sp|P04540|NU5M_TRYBB NADH-ubiquinone oxidoreductase chain 5... 45 0.003 >gb|AAA31881.1| A 'c' was inserted after nt 369 (=nt 10459 in genomic sequence (M10126)) to correct -1 frameshift probably due to gel compression Length = 355 Score = 62.8 bits (151), Expect = 2e-008 Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 2/247 (0%) Frame = -1
D + + IF V FF +S ++ L+FI FG+F S +F Y I+ YI Sbjct: 46 DFVVCITFIFVFVLG--FFLRIFFSFVFVLLFIVFFGLF-SLSFLYTGYFIY------YI 96
++ +FIC F CF S+ +++ F + FI +I I FG+ + M+ Sbjct: 97 YILYNFICYFFCF------SIALYYIEFFTYLLCFIFIDFISFSNHLISYFGI-INMFNV 149
+ CS+L+ LFY I+ F C +F I F + + FF + + Sbjct: 150 IF-CSYLFCLFYF--------IICFIFCF--IFFVIRCLFVIIYDFLFFNFDIYI----S 194
L+C I+ + I F +I+ + S + F CFI FL+L + FF Sbjct: 195 FLMCDII-------YIDYICFLLIYFGFIFSFITGFFCFIFVLNYVFLVLFFVLALFF-- 245
G++FL+
Sbjct: 246 -GFLFLS 251 ----------------------- gnl|ti|818422838 name:POAA-aaa23e24.b1 mate_pair:818421792 (400 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAW43186.1| Importin alpha subunit, putative [Cryptococc... 58 9e-008 ref|XP_659746.1| hypothetical protein AN2142.2 [Aspergillus... 56 3e-007 gb|AAK38726.1| importin alpha 1 [Capsicum annuum] 56 4e-007 gb|AAP31033.1| importin alpha [Toxoplasma gondii] 56 4e-007 gb|EAL93906.1| karyopherin alpha subunit, putative [Aspergi... 55 6e-007 ref|NP_850524.1| AT-IMP; protein transporter [Arabidopsis t... 55 6e-007 emb|CAA75513.1| Importin alpha-like protein [Arabidopsis th... 55 6e-007 gb|AAD09923.1| importin alpha homolog [Arabidopsis thaliana] 55 6e-007 emb|CAA75514.1| Importin alpha-like protein [Arabidopsis th... 54 1e-006 ref|NP_192124.1| ATIMPALPHA3/MOS6; protein transporter [Ara... 54 1e-006 >gb|AAW43186.1| Importin alpha subunit, putative [Cryptococcus neoformans var. neoformans JEC21] gb|EAL21461.1| hypothetical protein CNBD1560 [Cryptococcus neoformans var. neoformans B-3501A] ref|XP_570493.1| Importin alpha subunit, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 536
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +2
+ L + + + + I+GDSP C D VL +G LQ +L L N K+++ RNA WTL+N Sbjct: 171 SVLDVREQAVWALGNIAGDSPKCRDYVLGEGALQPLLGLLNENHKLSMIRNATWTLSNFC 230
GK PQ +++P Sbjct: 231 RGKNPQPEWELISP 244 ------------------ gnl|ti|818421793 name:POAA-aaa23g02.g1 (351 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00402115.1| Ribonuclease E and G [Anaeromyxobacter d... 54 2e-006 gb|AAL88889.1| WSSV021 [shrimp white spot syndrome virus] 50 3e-005 ref|ZP_00461555.1| Ribonuclease E and G [Burkholderia cenoc... 49 5e-005 ref|ZP_00425580.1| Ribonuclease E and G [Burkholderia vietn... 49 5e-005 ref|ZP_00686447.1| Ribonuclease E and G [Burkholderia ambif... 48 1e-004 ref|YP_334299.1| ribonuclease E [Burkholderia pseudomallei ... 47 2e-004 ref|ZP_00497973.1| COG1530: Ribonucleases G and E [Burkhold... 47 2e-004 ref|ZP_00493292.1| COG1530: Ribonucleases G and E [Burkhold... 47 2e-004 ref|ZP_00487910.1| COG1530: Ribonucleases G and E [Burkhold... 47 2e-004 ref|ZP_00477160.1| hypothetical protein Bpse17_01003000 [Bu... 47 2e-004 >ref|ZP_00402115.1| Ribonuclease E and G [Anaeromyxobacter dehalogenans 2CP-C] gb|EAL77267.1| Ribonuclease E and G [Anaeromyxobacter dehalogenans 2CP-C] Length = 868
Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -3
R +RR+ E+G + +EGR+GREG EGREGR GREGR N Sbjct: 287 RDRGDRRRDERGRRDGREGRDGREGREGREGREGREGRDRN 327 ---------------------- gnl|ti|818421798 name:POAA-aaa23g16.g1 mate_pair:818422843 (519 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_636831.1| hypothetical protein DDB0187821 [Dictyoste... 49 8e-005 ref|XP_636909.1| hypothetical protein DDB0187788 [Dictyoste... 43 0.005 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 1.1 ref|XP_636832.1| hypothetical protein DDB0187822 [Dictyoste... 35 1.5 ref|XP_216034.3| PREDICTED: similar to Cip1-interacting zin... 34 2.5 ref|XP_505624.1| hypothetical protein [Yarrowia lipolytica]... 33 5.6 ref|XP_537829.2| PREDICTED: similar to Cip1-interacting zin... 33 5.6 ref|XP_610020.2| PREDICTED: similar to Cip1-interacting zin... 32 7.3 gb|AAH72624.1| Ciz1 protein [Mus musculus] 32 7.3 emb|CAE00633.1| Cip1-interacting zinc-finger protein [Mus m... 32 7.3 >ref|XP_636831.1| hypothetical protein DDB0187821 [Dictyostelium discoideum] gb|EAL63328.1| hypothetical protein DDB0187821 [Dictyostelium discoideum] Length = 1954
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%) Frame = -2
IL A+HFRFGT+SW+ TT ++F S+FA+R +FF + KVG+ +N G N Sbjct: 16 ILTDASHFRFGTISWQ--PTTDYRTIKFTSNFAYRTTFFYSSTSSIKVGNLVNVGTLN 71 ------------------- gnl|ti|818421804 name:POAA-aaa23i08.g1 mate_pair:818422850 (643 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_635160.1| hypothetical protein DDB0183840 [Dictyoste... 47 5e-004 ref|YP_324659.1| DEAD/DEAH box helicase-like [Anabaena vari... 36 0.86 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 36 1.1 emb|CAA16265.1| Hypothetical protein F14F4.1 [Caenorhabditi... 33 5.6 gb|EAN10870.1| hypothetical protein EfaeDRAFT_2330 [Enteroc... 33 7.3 >ref|XP_635160.1| hypothetical protein DDB0183840 [Dictyostelium discoideum] gb|EAL61662.1| hypothetical protein DDB0183840 [Dictyostelium discoideum] Length = 816 Score = 47.0 bits (110), Expect = 5e-004 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = -3
S T LP PT LC FPWLLG+G+ +V+G LF Sbjct: 485 SVFTLLPTPTTPLCSGFPWLLGLGYVIVFGTLF 517 ------------------- gnl|ti|818422866 name:POAA-aaa23m12.b1 mate_pair:818421823 (547 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAC31550.1| unnamed protein product [Mus musculus] 87 3e-016 gb|EAA15769.1| ATPase, P-type, HAD superfamily, subfamily I... 80 5e-014 ref|XP_622603.1| PREDICTED: hypothetical protein XP_622603 ... 70 4e-011 gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium... 69 1e-010 ref|NP_608540.1| CG2839-PA [Drosophila melanogaster] >gi|22... 67 3e-010 gb|EAA15605.1| AhpC/TSA family, putative [Plasmodium yoelii... 67 3e-010 gb|AAL06922.1| AT5g60530/muf9_180 [Arabidopsis thaliana] 67 4e-010 ref|NP_200861.1| unknown protein [Arabidopsis thaliana] >gi... 67 4e-010 ref|XP_862724.1| PREDICTED: hypothetical protein XP_857631 ... 64 2e-009 dbj|BAC32869.1| unnamed protein product [Mus musculus] 64 2e-009 >dbj|BAC31550.1| unnamed protein product [Mus musculus] Length = 145 Score = 87.0 bits (214), Expect = 3e-016 Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 1/76 (1%) Frame = +2
LKE +RK K +RK K+ KGK +K K ++ KE KGK +K K ++ KR+G+ER+G+ERRGE Sbjct: 38 LKEEEKRKRKRKRKRKKEKGKRKKEKGKRKKE-KGKRKKEKGKRKKRRGEERRGEERRGE 96
ERRGEERRGEERR E+ Sbjct: 97 ERRGEERRGEERREEK 112 ------------------------------- gnl|ti|818421824 name:POAA-aaa23m14.g1 mate_pair:818422867 (358 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_640516.1| putative alpha-amylase [Dictyostelium disc... 71 1e-011 ref|XP_330961.1| hypothetical protein [Neurospora crassa] >... 36 0.36 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 0.81 ref|XP_876505.1| PREDICTED: similar to Interferon delta-1 p... 33 4.0 gb|AAS90126.1| cytochrome P450 [Ammi majus] 32 5.3 ref|XP_510206.1| PREDICTED: jagged 2 [Pan troglodytes] 32 5.3 gb|AAC14083.1| TcC31.27 [Trypanosoma cruzi] 32 9.0 emb|CAE69706.1| Hypothetical protein CBG15974 [Caenorhabdit... 32 9.0 ref|XP_540579.2| PREDICTED: similar to deltex 4 homolog [Ca... 32 9.0 >ref|XP_640516.1| putative alpha-amylase [Dictyostelium discoideum] gb|EAL66535.1| putative alpha-amylase [Dictyostelium discoideum] Length = 470 Score = 71.2 bits (173), Expect = 1e-011 Identities = 34/62 (54%), Positives = 43/62 (69%) Frame = +2
R N + L ++Q + FYAFTRGN FVALTNGGSN+ Q +RNIT+HPY G LCN Sbjct: 379 RANITEDLTIAQVQRYSDNGFYAFTRGNAFVALTNGGSNEVQTSRNITYHPYLEGTTLCN 438
++ Sbjct: 439 IF 440 ---------------- gnl|ti|818421825 name:POAA-aaa23m16.g1 mate_pair:818422868 (596 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_738775.1| hypothetical protein PC401526.00.0 [Plasmo... 60 6e-008 ref|XP_732422.1| hypothetical protein PC403258.00.0 [Plasmo... 57 4e-007 dbj|BAA00447.1| open reading frame (251 AA) [Mus musculus] 52 2e-005 gb|AAW26160.1| SJCHGC06985 protein [Schistosoma japonicum] 49 1e-004 gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium... 48 2e-004 gb|AAK93551.1| SD07741p [Drosophila melanogaster] 41 0.029 ref|NP_647642.2| CG7971-PA, isoform A [Drosophila melanogas... 40 0.038 ref|NP_728652.1| CG7971-PC, isoform C [Drosophila melanogas... 40 0.038 gb|AAL13867.1| LD33732p [Drosophila melanogaster] 40 0.038 ref|NP_001027103.1| CG7971-PD, isoform D [Drosophila melano... 40 0.038 >ref|XP_738775.1| hypothetical protein PC401526.00.0 [Plasmodium chabaudi] emb|CAH83762.1| hypothetical protein PC401526.00.0 [Plasmodium chabaudi] Length = 228
Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 2/150 (1%) Frame = -2
++++ + +YL +LS++LSIY+SL I I+ I + L + ++Y + + ++ Sbjct: 71 YLSIYLSIYLSIYLSIYLSIYLSIYLSLVISINLSIISLSLSIYLCIYVSMYLCIYVSMY 130
L + +S +S+YL++SI L I L +L + + + ++ I S C L + Sbjct: 131 LCIYVSIYLSIYLYLSIYLSIYLSIYLSIYLSIYLSIYLSISLSLC--------LSIYLS 182
YL L +CLS++ L + LS+Y+SV+ Sbjct: 183 IYLSVCLSVCLSVY----LSVCLSVYVSVY 208 -------------------------- gnl|ti|818421831 name:POAA-aaa23o08.g1 mate_pair:818422875 (682 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_481213.1| putative DNA-binding protein WRKY2 [Oryza ... 50 8e-005 gb|AAO52331.1| similar to Plasmodium falciparum. Hypothetic... 49 1e-004 ref|XP_643786.1| putative WRKY transcription factor [Dictyo... 49 1e-004 gb|AAU44246.1| WRKY transcription factor 70 [Oryza sativa (... 48 3e-004 ref|NP_172849.1| WRKY4; transcription factor [Arabidopsis t... 47 4e-004 ref|NP_849658.1| WRKY4; transcription factor [Arabidopsis t... 47 4e-004 gb|AAF79402.1| F16A14.18 [Arabidopsis thaliana] 47 4e-004 gb|AAT84156.1| transcription factor WRKY07 [Oryza sativa (i... 47 5e-004 ref|NP_915299.1| putative DNA-binding protein ABF1 [Oryza s... 47 5e-004 tpg|DAA05089.1| TPA: WRKY transcription factor 24 [Oryza sa... 47 5e-004 >ref|XP_481213.1| putative DNA-binding protein WRKY2 [Oryza sativa (japonica cultivar-group)] dbj|BAC99487.1| putative DNA-binding protein WRKY2 [Oryza sativa (japonica cultivar-group)] Length = 549
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -3
F WR G K VK +S YY+C C AK + PDG + Y G+HNH+PP Sbjct: 231 FNWRKYGQKQVKSSENSRS---YYRCTNSNCLAKKKVEHCPDGRVVEIIYRGTHNHEPPQ 287
K ++V
Sbjct: 288 KTRFVKERV 296 ---------------- gnl|ti|818421833 name:POAA-aaa23o12.g1 (905 letters) Score E
Sequences producing significant alignments: (bits) Value ref|NP_703482.1| hypothetical protein [Plasmodium falciparu... 59 2e-007 dbj|BAC85679.1| unnamed protein product [Homo sapiens] 50 1e-004 ref|NP_001003399.1| hypothetical protein LOC400169 [Homo sa... 46 0.002 ref|XP_522732.1| PREDICTED: similar to DKFZp451A211 protein... 42 0.038 gb|EAN79239.1| hypothetical protein, conserved [Trypanosoma... 42 0.038 dbj|BAD62032.1| hypothetical protein [Oryza sativa (japonic... 41 0.050 ref|XP_675648.1| hypothetical protein PB402672.00.0 [Plasmo... 40 0.14 gb|AAS92593.1| excretory/secretory protein Juv-p120 precurs... 39 0.25 dbj|BAC39959.1| unnamed protein product [Mus musculus] 39 0.25 emb|CAG11872.1| unnamed protein product [Tetraodon nigrovir... 39 0.32 >ref|NP_703482.1| hypothetical protein [Plasmodium falciparum 3D7] emb|CAD51502.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 736
Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 9/115 (7%) Frame = +2
P +LS FP SF L FP SF I +F + LSFP L+FP+ LS P FI + + Sbjct: 79 PFILS-FPFILSFPFILSFPFILSFPFILSFPFILSFPFILSFPFILSFP--FILSFPFI 135
+F PF +FP+ LS P PF++S +LS F +FP+ LS FP SFP Sbjct: 136 LSF--PFILSFPFILSFPFILSFPFILSFPFILSFPFILSFPFILS-FPFILSFP 187 ---------------- gnl|ti|818422877 name:POAA-aaa23o14.b1 mate_pair:818421834 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_785731.1| PREDICTED: similar to collapsin response m... 50 8e-005 ref|ZP_00731970.1| hypothetical protein AsucDRAFT_1199 [Act... 47 9e-004 ref|ZP_00541140.1| hypothetical protein MbarDRAFT_4531 [Met... 42 0.029 ref|YP_336219.1| hypothetical protein BURPS1710b_A1062 [Bur... 42 0.037 ref|YP_104527.1| hypothetical protein BMA3028 [Burkholderia... 40 0.083 ref|XP_233144.3| PREDICTED: similar to mKIAA1797 protein [R... 39 0.24 ref|ZP_00532587.1| hypothetical protein Cphamn1DRAFT_1511 [... 38 0.54 gb|AAT93750.1| GMP synthase [Borrelia garinii PBi] >gi|5103... 37 0.70 ref|XP_609742.2| PREDICTED: similar to collagen, type XXIV,... 37 1.2 ref|NP_703740.1| hypothetical protein [Plasmodium falciparu... 36 2.0 >ref|XP_785731.1| PREDICTED: similar to collapsin response mediator protein 1 [Strongylocentrotus purpuratus] Length = 258
Yüklə 3,49 Mb. Dostları ilə paylaş:
|