Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
|
| Score = 50.4 bits (119), Expect = 8e-005
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Frame = -2
CE ++ C+++I K+ C ++ CE+++ CE++ +CK++I C+++I C Sbjct: 96 CEIKITCEIKITC---------EIKVTCEIKITCEIKVT-CEIKVSCKIKITCEIKI-TC 144
+++I CE++I C++ I C K C + C++ C + + C EI+ V C Sbjct: 145 EIKI-TCEIKI-TCEIKIT-CEIKVTCEIKVTCEIKVTC--EIKITC-EIKITSEIKVTC 198
E VTC
Sbjct: 199 EI-KVTC 204 ---------------------- gnl|ti|818421838 name:POAA-aaa23o22.g1 (899 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 73 1e-011 dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 67 1e-009 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 1e-006 gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 52 3e-005 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 48 5e-004 ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004 gb|EAA21327.1| putative senescence-associated protein [Plas... 47 0.001 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001 >gb|AAS66225.1| LRRG00134 [Rattus norvegicus] Length = 221 Score = 73.2 bits (178), Expect = 1e-011 Identities = 47/89 (52%), Positives = 52/89 (58%), Gaps = 6/89 (6%) Frame = +3
VNNPTL EFCF+MIGRADIEGSKS VAMNAW PQAS SD+ L G Sbjct: 26 VNNPTLGEFCFTMIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLKPKSYGS----- 80
GL P T + P +RL T GYG+ Sbjct: 81 GL-PTSLTYIVP-TCQRLFTLETCCGYGY 107 -------
gnl|ti|818420072 name:POAA-aaa24b05.g1 mate_pair:818419743 (747 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_703482.1| hypothetical protein [Plasmodium falciparu... 74 6e-012 dbj|BAC31550.1| unnamed protein product [Mus musculus] 67 5e-010 gb|AAL06922.1| AT5g60530/muf9_180 [Arabidopsis thaliana] 67 8e-010 ref|NP_200861.1| unknown protein [Arabidopsis thaliana] >gi... 67 8e-010 ref|XP_669731.1| hypothetical protein PB400375.00.0 [Plasmo... 64 5e-009 gb|EAA15769.1| ATPase, P-type, HAD superfamily, subfamily I... 64 7e-009 ref|XP_796395.1| PREDICTED: similar to Integrin alpha-8 pre... 60 7e-008 ref|XP_636078.1| hypothetical protein DDB0188541 [Dictyoste... 60 1e-007 gb|EAA15605.1| AhpC/TSA family, putative [Plasmodium yoelii... 60 1e-007 ref|XP_644124.1| hypothetical protein DDB0167703 [Dictyoste... 59 1e-007 >ref|NP_703482.1| hypothetical protein [Plasmodium falciparum 3D7] emb|CAD51502.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 736
Identities = 57/85 (67%), Positives = 62/85 (72%), Gaps = 9/85 (10%) Frame = -1
L+FP+ L LSFPF LSFPF LSFPF LSFPF LSFPF LSFPF LSF F LSFPF+ Sbjct: 118 LSFPFILSFPFILSFPFILSFPFILSFPFILSFPFILSFPFILSFPFILSFPFILSFPFI 177
SFPF LSFPF LS PF L + + Sbjct: 178 --LSFPFILSFPFILSFPFILSFYI 200 -------------- gnl|ti|820222479 name:POAA-aab90b03.g1 mate_pair:820221889 (922 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAD56609.1| putative calmodulin-binding protein CaM-BP46... 96 2e-018 ref|XP_636873.1| putative calmodulin-binding protein CaM-BP... 95 4e-018 ref|XP_646988.1| hypothetical protein DDB0216635 [Dictyoste... 89 2e-016 ref|YP_142635.1| unknown [Acanthamoeba polyphaga mimivirus]... 88 5e-016 ref|XP_635642.1| hypothetical protein DDB0188946 [Dictyoste... 86 1e-015 ref|XP_645366.1| hypothetical protein DDB0168603 [Dictyoste... 84 9e-015 ref|YP_142990.1| unknown [Acanthamoeba polyphaga mimivirus]... 82 3e-014 ref|XP_643726.1| hypothetical protein DDB0167501 [Dictyoste... 82 3e-014 ref|YP_142516.1| unknown [Acanthamoeba polyphaga mimivirus]... 80 1e-013 ref|XP_641406.1| hypothetical protein DDB0205868 [Dictyoste... 79 3e-013 >gb|AAD56609.1| putative calmodulin-binding protein CaM-BP46 [Dictyostelium discoideum] Length = 413 Score = 95.9 bits (237), Expect = 2e-018 Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 18/237 (7%) Frame = +1
H LPPS +L++ + LP +L +L+T ++P P V L F Sbjct: 134 HALPPSAEYLFLSDCYNQAFRAGDLPPNLN------ILETGDEYKPFDPLVIPKSLRSLF 187
G P LT L+ V + + P+ LPP L+ L L +FNHPI+A LPP Sbjct: 188 LGKGYNQPLEFGGLTSLTCLVYDEGSISELPIISLPPNLEFLLLSDAFNHPIEAGMLPPK 247
L LT G+ FNQ + L P L ++ GK F+Q + LP L+++ S FS Sbjct: 248 LKTLTFGDGFNQPLAVGTLPPSLENINFGKVFDQPFLPNVLPHHLKSISFH-QFSYFSQT 306
+++P + + +N P+ SLP L +++F + ++ P+ LP SL H LGKS Sbjct: 307 FENIPSHVQTVEFGYTYNKPITSLPSHLKYIKFSEKYNHPIDGVLPQSLTHCYLGKS 363 --------------------- gnl|ti|820222504 name:POAA-aab90d06.g1 mate_pair:820221914 (917 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_646227.1| hypothetical protein DDB0190504 [Dictyoste... 67 7e-010 gb|EAN77651.1| ubiquitin-conjugating enzyme variant Kua hom... 41 0.066 ref|XP_819427.1| ubiquitin-conjugating enzyme variant Kua h... 41 0.066 emb|CAA22139.1| Hypothetical protein Y53C10A.5 [Caenorhabdi... 39 0.25 ref|XP_798250.1| PREDICTED: similar to CG10723-PA [Strongyl... 36 1.6 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 36 2.1 ref|NP_822114.1| type I polyketide synthase AVES 2 [Strepto... 35 4.8 ref|NP_822113.1| type I polyketide synthase AVES 1 [Strepto... 35 4.8 ref|XP_496038.1| PREDICTED: similar to hect domain and RLD ... 35 4.8 gb|EAL33161.1| GA10523-PA [Drosophila pseudoobscura] 35 4.8 >ref|XP_646227.1| hypothetical protein DDB0190504 [Dictyostelium discoideum] gb|EAL72212.1| hypothetical protein DDB0190504 [Dictyostelium discoideum] Length = 354 Score = 67.4 bits (163), Expect = 7e-010 Identities = 36/70 (51%), Positives = 48/70 (68%) Frame = +3
K+ A+ L + YT TKRT EIISV++F I L IS R + L F++N W+ L + VL+M Sbjct: 113 KEDKAKDLKNRYTSTKRTTEIISVTLFSIFLAISVYRMLT-LLFIKNIWIFLSSTVLAMF 171
+ADFFSGI H Sbjct: 172 LADFFSGIVH 181 -------------------- gnl|ti|820222520 name:POAA-aab90e11.g1 mate_pair:820221928 (902 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAB84114.1| putative glycosyl transferase [Neisseria me... 66 1e-009 gb|AAK29178.1| glycosyltransferase PglE [Neisseria meningit... 65 2e-009 ref|XP_640618.1| hypothetical protein DDB0204646 [Dictyoste... 64 5e-009 ref|XP_639918.1| hypothetical protein DDB0186245 [Dictyoste... 64 7e-009 ref|XP_629120.1| putative C-module-binding factor [Dictyost... 63 2e-008 ref|XP_643533.1| hypothetical protein DDB0167229 [Dictyoste... 62 2e-008 ref|XP_629530.1| TFIID subunit [Dictyostelium discoideum] >... 62 2e-008 ref|XP_646214.1| hypothetical protein DDB0190492 [Dictyoste... 62 3e-008 ref|XP_637531.1| putative GATA-binding transcription factor... 62 4e-008 ref|XP_637180.1| hypothetical protein DDB0187521 [Dictyoste... 62 4e-008 >emb|CAB84114.1| putative glycosyl transferase [Neisseria meningitidis Z2491] ref|NP_283625.1| glycosyl transferase [Neisseria meningitidis Z2491] pir||E81928 probable glycosyl transferase NMA0832 [imported] - Neisseria meningitidis (strain Z2491 serogroup A) Length = 383 Score = 66.2 bits (160), Expect = 1e-009 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 7/76 (9%) Frame = +1
+KYI QQ +QQTTNNKQQ TN+KQQTTNNKQQ TN+KQQ QQT NNK Sbjct: 50 YKYIDKTTNNKQQTTNNKQQTTNNKQQTTNNKQQTTNNKQQTTNNKQQTTNNKQQTTNNK 109
Q+ ++T I+ + Sbjct: 110 QQTTNNKHRTPNIKYI 125 ------------------ gnl|ti|820222522 name:POAA-aab90f02.g1 mate_pair:820221931 (904 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 258 2e-067 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 241 2e-062 gb|AAR02632.1| conserved hypothetical protein [Salmonella t... 234 2e-060 ref|YP_355421.1| hypothetical protein pCollet_06 [Escherich... 232 1e-059 gb|AAB59125.1| 13.8 kd ORF [Plasmid ColE1] >gi|9507258|ref|... 229 1e-058 sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 179 2e-043 ref|NP_995570.1| hypothetical protein pPCP04 [Yersinia pest... 168 2e-040 ref|XP_731877.1| hypothetical protein PC403819.00.0 [Plasmo... 160 7e-038 ref|XP_668948.1| hypothetical protein PB400037.00.0 [Plasmo... 160 7e-038 gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 122 1e-026 >pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimurium plasmid NTP16 Length = 149
Identities = 122/127 (96%), Positives = 123/127 (96%) Frame = -2
RFSIGSAP+TSITKIDAQ RGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLR Sbjct: 15 RFSIGSAPLTSITKIDAQARGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLR 74
EAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR DTTYRHWQQP Sbjct: 75 EAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTRXDTTYRHWQQP 134
LVT L E
Sbjct: 135 LVTDLEE 141 ----------------------- gnl|ti|820222531 name:POAA-aab90f12.g1 (634 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_643905.1| hypothetical protein DDB0217475 [Dictyoste... 63 6e-009 ref|XP_792838.1| PREDICTED: similar to hypertension-related... 62 1e-008 gb|AAH78284.1| Hypothetical protein LOC445159 [Danio rerio]... 55 1e-006 gb|AAH88938.1| LOC496342 protein [Xenopus laevis] 55 2e-006 gb|AAH75209.1| Commd5-prov protein [Xenopus laevis] 54 4e-006 emb|CAG31154.1| hypothetical protein [Gallus gallus] >gi|56... 52 1e-005 ref|NP_001014850.1| hypertension-related calcium-regulated ... 52 2e-005 ref|NP_054785.2| hypertension-related calcium-regulated gen... 51 2e-005 ref|XP_539226.2| PREDICTED: similar to hypertension-related... 51 2e-005 dbj|BAA91714.1| unnamed protein product [Homo sapiens] 51 2e-005 >ref|XP_643905.1| hypothetical protein DDB0217475 [Dictyostelium discoideum] gb|AAO51885.1| similar to Mus musculus (Mouse). RIKEN cDNA 2310065H03 gene [Dictyostelium discoideum] gb|EAL70288.1| hypothetical protein DDB0217475 [Dictyostelium discoideum] Length = 205 Score = 63.2 bits (152), Expect = 6e-009 Identities = 26/46 (56%), Positives = 38/46 (82%) Frame = +1
WRVDV+ISSSF SR + PV+LME+ ++G+ K FE+S++ FH+LR+ Sbjct: 136 WRVDVIISSSFTSRVLNPVILMEMNDTNGKSKVFEVSIDNFHKLRY 181 -------------------- gnl|ti|820222548 name:POAA-aab90h09.g1 (693 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAI07802.1| Unknown (protein for IMAGE:4072707) [Homo sa... 52 2e-005 ref|XP_218162.3| PREDICTED: similar to Eukaryotic translati... 52 2e-005 gb|AAQ91053.1| LRRGT00097 [Rattus norvegicus] >gi|62665707|... 52 2e-005 emb|CAH90216.1| hypothetical protein [Pongo pygmaeus] 51 3e-005 gb|AAX93258.1| unknown [Homo sapiens] 51 3e-005 gb|AAH32639.1| Translation initiation factor IF2 [Homo sapi... 51 3e-005 ref|XP_641637.1| hypothetical protein DDB0205777 [Dictyoste... 51 3e-005 ref|NP_056988.2| translation initiation factor IF2 [Homo sa... 51 3e-005 gb|AAI03807.1| Unknown (protein for MGC:118723) [Mus musculus] 51 3e-005 dbj|BAA34461.2| KIAA0741 protein [Homo sapiens] 51 3e-005 >gb|AAI07802.1| Unknown (protein for IMAGE:4072707) [Homo sapiens] Length = 383
Identities = 30/92 (32%), Positives = 52/92 (56%) Frame = -1
EK R++++R KE+E R R + R + RR+ R+ + R+R+G+RR Sbjct: 298 EKERQRLEREAKEREKERRRSRSIDRGLERRRS-------RSRERHRSRSRSRDRKGDRR 350
R +EK+ RGR + + +KE+GK++K+ K Sbjct: 351 DRDREREKENERGRRRDRDYDKERGKKKKKKK 382 ------------------ gnl|ti|820222557 name:POAA-aab91a07.g1 mate_pair:820221964 (241 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAC31550.1| unnamed protein product [Mus musculus] 46 4e-004 ref|NP_700900.1| hypothetical protein PF11_0035 [Plasmodium... 45 8e-004 ref|NP_608540.1| CG2839-PA [Drosophila melanogaster] >gi|22... 44 0.001 gb|AAQ91053.1| LRRGT00097 [Rattus norvegicus] >gi|62665707|... 44 0.002 ref|XP_654864.1| hypothetical protein 42.t00003 [Entamoeba ... 43 0.003 dbj|BAC38447.1| unnamed protein product [Mus musculus] >gi|... 43 0.003 ref|XP_360353.1| hypothetical protein MG05727.4 [Magnaporth... 42 0.005 dbj|BAC87222.1| unnamed protein product [Homo sapiens] 42 0.005 emb|CAG06006.1| unnamed protein product [Tetraodon nigrovir... 42 0.005 ref|XP_864675.1| PREDICTED: hypothetical protein XP_859582 ... 42 0.007 >dbj|BAC31550.1| unnamed protein product [Mus musculus] Length = 145
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%) Frame = -1
R +K+ K +K + +K+ GK++KE+ K+K+ G ERR +ER G RGEE RG+ Sbjct: 50 RKRKKEKGKRKKEKGKRKKEKGKRKKEKGKRKKRRGEERRGEERRGEERRGEERRGE 106 -------------- gnl|ti|820222571 name:POAA-aab91b11.g1 mate_pair:820221978 (473 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_782551.1| PREDICTED: similar to CG14551-PA, partial ... 50 2e-005 ref|XP_797482.1| PREDICTED: similar to CG14551-PA [Strongyl... 50 3e-005 gb|AAH64159.1| Hypothetical protein MGC75611 [Xenopus tropi... 48 1e-004 dbj|BAB24178.1| unnamed protein product [Mus musculus] >gi|... 36 0.49 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 0.64 ref|XP_586154.2| PREDICTED: hypothetical protein XP_586154 ... 35 1.1 ref|XP_848917.1| PREDICTED: hypothetical protein XP_843824 ... 35 1.1 ref|XP_208990.1| PREDICTED: hypothetical protein XP_208990 ... 33 2.4 ref|XP_573200.1| PREDICTED: hypothetical protein XP_573200 ... 33 3.2 ref|NP_666521.1| olfactory receptor 1080 [Mus musculus] >gi... 33 4.2 >ref|XP_782551.1| PREDICTED: similar to CG14551-PA, partial [Strongylocentrotus purpuratus] Length = 199 Score = 50.4 bits (119), Expect = 2e-005 Identities = 26/59 (44%), Positives = 38/59 (64%) Frame = +2
Q +RLA IE++N ILL+KM IM+ +DNR+ +SLNR R++E R+ +NQ Sbjct: 58 QLEEERLAVIERDNRILLEKMSVIMRTRGRVDNRNNYIHRSLNREKRQRELLRVTRENQ 116 ------------------------------------ gnl|ti|820222594 name:POAA-aab91e03.g1 mate_pair:820222003 (546 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00314749.1| COG3210: Large exoproteins involved in h... 54 4e-006 ref|ZP_00317746.1| hypothetical protein Mdeg02000213 [Micro... 41 0.018 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 39 0.090 ref|ZP_00110033.1| COG2133: Glucose/sorbosone dehydrogenase... 36 0.58 emb|CAI76644.1| hypothetical protein, conserved [Theileria ... 34 2.2 gb|AAT94464.1| RE05635p [Drosophila melanogaster] 34 2.9 ref|NP_524886.2| CG5965-PA [Drosophila melanogaster] >gi|23... 34 2.9 gb|AAL13939.1| LD44304p [Drosophila melanogaster] 34 2.9 emb|CAC01697.1| WOC protein [Drosophila melanogaster] 34 2.9 gb|EAL27506.1| GA19264-PA [Drosophila pseudoobscura] 34 2.9 >ref|ZP_00314749.1| COG3210: Large exoproteins involved in heme utilization or adhesion [Microbulbifer degradans 2-40] Length = 1504 Score = 53.5 bits (127), Expect = 4e-006 Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = -2
FN+ +GSPGVTGIGSD FSI W GYV A+ TG+Y F T S Sbjct: 524 FNWGSGSPGVTGIGSDNFSIDWNGYVRAEETGTYFFQTES 563 ------------------------------------------- gnl|ti|820222599 name:POAA-aab91e08.g1 mate_pair:820222008 (842 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA80972.1| neuropeptide AnthoRFamide [Renilla koellikeri] 97 9e-019 gb|AAD12213.1| putative vicilin storage protein (globulin-l... 96 1e-018 ref|NP_179444.2| nutrient reservoir [Arabidopsis thaliana] 96 1e-018 ref|NP_608540.1| CG2839-PA [Drosophila melanogaster] >gi|22... 95 3e-018 gb|AAX49604.1| RPGR [Macaca mulatta] 92 2e-017 dbj|BAB78478.1| preproMP73 [Cucurbita maxima] 92 2e-017 gb|EAN77477.1| hypothetical protein, conserved [Trypanosoma... 92 3e-017 gb|AAG00551.1| retinitis pigmentosa GTPase regulator [Homo ... 91 5e-017 ref|NP_001030025.1| retinitis pigmentosa GTPase regulator i... 91 5e-017 tpg|DAA05713.1| TPA: RPGR ORF15 isoform [Homo sapiens] 91 5e-017 >emb|CAA80972.1| neuropeptide AnthoRFamide [Renilla koellikeri] Length = 487
Identities = 61/150 (40%), Positives = 94/150 (62%), Gaps = 11/150 (7%) Frame = -2
G + RE E +G+ E++GR G++ EE+GR G E+GR G++ E+GR G++ EE+ Sbjct: 279 GRFGRENEEQGRFGRENEKQGRFGRENEEQGRFGRGNEEQGRFGRENEEQGRFGRENEEQ 338
GR G++ EE+GR G++ EE+GR G+ EE+GR G + E ++ R R +E + R Sbjct: 339 GRFGRENEEQGRFGRENEEQGRFGRENEEQGRFGRENE------KQGRFGRGDEEQGRFG 392
RE EE+ GRG E+GR G+ E +G+ G Sbjct: 393 RENEEQGRFGRGDEEQGRFGRENEEQGRFG 422 ---------------------- gnl|ti|820222605 name:POAA-aab91f03.g1 mate_pair:820222014 (888 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_005031.1| prolylcarboxypeptidase isoform 1 prepropro... 67 8e-010 ref|NP_955450.1| prolylcarboxypeptidase isoform 2 [Homo sap... 67 8e-010 emb|CAH90763.1| hypothetical protein [Pongo pygmaeus] >gi|6... 67 8e-010 ref|XP_427517.1| PREDICTED: similar to Lysosomal Pro-X carb... 65 4e-009 ref|XP_425654.1| PREDICTED: similar to Lysosomal Pro-X carb... 65 4e-009 ref|XP_533994.2| PREDICTED: similar to Lysosomal Pro-X carb... 65 4e-009 ref|NP_082519.1| angiotensinase C like [Mus musculus] >gi|2... 63 2e-008 gb|AAH26424.1| Prcp protein [Mus musculus] 63 2e-008 gb|AAH55022.1| Prcp protein [Mus musculus] >gi|74147590|dbj... 63 2e-008 emb|CAF90249.1| unnamed protein product [Tetraodon nigrovir... 63 2e-008 >ref|NP_005031.1| prolylcarboxypeptidase isoform 1 preproprotein [Homo sapiens] gb|AAH01500.1| Prolylcarboxypeptidase, isoform 1 preproprotein [Homo sapiens] sp|P42785|PCP_HUMAN Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) (Angiotensinase C) (Lysosomal carboxypeptidase C) gb|AAA99891.1| prolylcarboxypeptidase Length = 496 Score = 67.0 bits (162), Expect = 8e-010 Identities = 26/61 (42%), Positives = 41/61 (67%) Frame = +2
++AM DYPY +NFL+P+PAWP+ + CQ + + + + A++VYYNY+G+V C Sbjct: 285 NLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCL 344
N Sbjct: 345 N 345 ---------------- gnl|ti|820222610 name:POAA-aab91f08.g1 mate_pair:820222019 (926 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_505845.1| hypothetical protein [Yarrowia lipolytica]... 78 5e-013 gb|AAO47003.1| tryptophan synthetase [Nodulisporium sp. ATC... 76 2e-012 gb|EAA75000.1| TRP_NEUCR Tryptophan synthase [Gibberella ze... 75 2e-012 emb|CAG87174.1| unnamed protein product [Debaryomyces hanse... 75 3e-012 ref|NP_011489.1| Tryptophan synthase involved in tryptophan... 75 3e-012 emb|CAA24636.1| put. tryptophan synthetase [Saccharomyces c... 75 3e-012 ref|XP_444829.1| unnamed protein product [Candida glabrata]... 74 6e-012 gb|EAL23085.1| hypothetical protein CNBA6100 [Cryptococcus ... 74 9e-012 gb|AAW41157.1| tryptophan synthase, putative [Cryptococcus ... 74 9e-012 gb|AAS53856.1| AFR485Cp [Ashbya gossypii ATCC 10895] >gi|45... 73 1e-011 >ref|XP_505845.1| hypothetical protein [Yarrowia lipolytica] emb|CAG78656.1| unnamed protein product [Yarrowia lipolytica CLIB99] Length = 692 Score = 77.8 bits (190), Expect = 5e-013 Identities = 35/62 (56%), Positives = 43/62 (69%) Frame = -3
MS L F C+K+GRP V ++ AG+ E TVP + LQ GGADV+ELGIPFTDP+A Sbjct: 1 MSAHLAATFEQCKKEGRPALVTFVTAGFPSVEKTVPILEGLQTGGADVIELGIPFTDPVA 60
DG Sbjct: 61 DG 62 ------------------- gnl|ti|820222621 name:POAA-aab91g10.g1 mate_pair:820222030 (913 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_784545.1| PREDICTED: similar to Golgi-specific brefe... 69 2e-010 emb|CAH93369.1| hypothetical protein [Pongo pygmaeus] 67 7e-010 ref|NP_849261.2| golgi-specific brefeldin A-resistance fact... 67 7e-010 ref|XP_521592.1| PREDICTED: golgi-specific brefeldin A resi... 67 7e-010 Yüklə 3,49 Mb. Dostları ilə paylaş:
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