Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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gb|EAN29674.1| PAS [Magnetococcus sp. MC-1] >gi|69256468|re... 103 6e-021 gb|AAP80772.1| MmoS [Methylococcus capsulatus] 103 1e-020 ref|YP_113669.1| sensory box histidine kinase/response regu... 103 1e-020 ref|NP_440376.1| hybrid sensory kinase [Synechocystis sp. P... 102 1e-020 emb|CAA65047.1| putative sensor kinase [Synechocystis sp.] 102 2e-020 ref|ZP_00660842.1| PAS [Prosthecochloris vibrioformis DSM 2... 102 2e-020 ref|YP_321548.1| Multi-sensor Hybrid Histidine Kinase [Anab... 101 3e-020 ref|YP_284163.1| Response regulator receiver:ATP-binding re... 101 3e-020 >ref|ZP_00053728.2| COG0642: Signal transduction histidine kinase [Magnetospirillum magnetotacticum MS-1] Length = 512 Score = 106 bits (265), Expect = 1e-021 Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Frame = +1
MNG+LG + L+ + L+ EQ D++ T + SA SLLS+INDIL FSKLEA Q ++ ST F Sbjct: 164 MNGVLGMLHLLTGSPLTPEQRDHLETAQSSARSLLSIINDILDFSKLEAGQMKMESTRFD 223
L+E +G LL K L L + N+P H GD NRL+QIL N++GN++KFT Sbjct: 224 LYRLMEEMGALLKGAAMDKGLDLRLHIAANVPRHHCGDSNRLRQILTNLMGNAVKFTERG 283
G EV+V
Sbjct: 284 GVEVLV 289 ----------------- gnl|ti|818413576 name:POAA-aab50e06.g1 mate_pair:818413254 (885 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_647334.1| hypothetical protein DDB0189570 [Dictyoste... 63 1e-008 gb|EAL29051.1| GA18120-PA [Drosophila pseudoobscura] 62 3e-008 ref|XP_625167.1| PREDICTED: similar to ENSANGP00000019242 [... 59 2e-007 gb|AAF55160.1| CG4338-PA [Drosophila melanogaster] >gi|3358... 59 2e-007 ref|XP_470582.1| Unknown protein [Oryza sativa (japonica cu... 57 1e-006 gb|AAW42584.1| conserved hypothetical protein [Cryptococcus... 56 1e-006 gb|AAS51234.1| ACR007Wp [Ashbya gossypii ATCC 10895] >gi|45... 55 3e-006 ref|NP_001017135.1| hypothetical protein LOC549889 [Xenopus... 55 3e-006 emb|CAG04371.1| unnamed protein product [Tetraodon nigrovir... 54 9e-006 gb|AAH75886.1| Zgc:92086 [Danio rerio] >gi|50539800|ref|NP_... 53 1e-005 >ref|XP_647334.1| hypothetical protein DDB0189570 [Dictyostelium discoideum] gb|EAL73364.1| hypothetical protein DDB0189570 [Dictyostelium discoideum] Length = 365
Identities = 29/43 (67%), Positives = 36/43 (83%) Frame = +1
IV++P +QS+S ADR+IV+ GV VVDCSWAK+DSIPF KMK Sbjct: 101 IVLTPSAKQSISPADRDIVQNLGVSVVDCSWAKVDSIPFGKMK 143
Identities = 26/53 (49%), Positives = 39/53 (73%) Frame = +3
H ++ + P+K + DFGQCDSK+CTGRKL R+G+VK +++ +F+GIVL Sbjct: 54 HRIMALSFPIK---LSMWDFGQCDSKKCTGRKLERLGYVKSINLTHKFKGIVL 103 ---------------------- gnl|ti|818413261 name:POAA-aab50f04.b1 (522 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_757461.1| hypothetical protein UM01314.1 [Ustilago m... 48 2e-004 gb|AAU09682.1| YDL178W [Saccharomyces cerevisiae] 46 5e-004 emb|CAG60932.1| unnamed protein product [Candida glabrata C... 46 5e-004 emb|CAA91567.1| putative protein [Saccharomyces cerevisiae]... 46 5e-004 emb|CAG98049.1| unnamed protein product [Kluyveromyces lact... 46 7e-004 ref|XP_783292.1| PREDICTED: similar to CG3835-PA, isoform A... 46 7e-004 gb|AAB65016.1| Yel071wp [Saccharomyces cerevisiae] >gi|6320... 46 7e-004 ref|XP_645929.1| hypothetical protein DDB0201710 [Dictyoste... 45 9e-004 gb|AAS51207.1| ACL021Cp [Ashbya gossypii ATCC 10895] >gi|45... 45 0.001 emb|CAC22604.1| SPBC713.03 [Schizosaccharomyces pombe] >gi|... 45 0.001 >ref|XP_757461.1| hypothetical protein UM01314.1 [Ustilago maydis 521] gb|EAK82177.1| hypothetical protein UM01314.1 [Ustilago maydis 521] Length = 574
Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +2
GNV+GLE VLP G ++D LSTLRKDNTG Sbjct: 265 GNVLGLEVVLPDGTIMDNLSTLRKDNTG 292 Score = 41.6 bits (96), Expect = 0.012 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 34 CCVGGVVSTNAGGLLLLRYGSLHG 105 C +GG V+TNAGGL LRYGSLHG Sbjct: 242 CHIGGNVATNAGGLRFLRYGSLHG 265 ------------------ nl|ti|818413264 name:POAA-aab50f07.b1 mate_pair:818413586 (904 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 465 e-129 ----------- gnl|ti|818413586 name:POAA-aab50f07.g1 mate_pair:818413264 (892 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 247 4e-064 gb|AAR02632.1| conserved hypothetical protein [Salmonella t... 222 1e-056 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 218 3e-055 gb|AAB59125.1| 13.8 kd ORF [Plasmid ColE1] >gi|9507258|ref|... 214 2e-054 ------------ gnl|ti|818413284 name:POAA-aab50h07.b1 mate_pair:818413606 (563 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 316 2e-085 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 316 2e-085 ----------- gnl|ti|818413606 name:POAA-aab50h07.g1 mate_pair:818413284 (762 letters) Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 177 3e-043 pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 130 5e-029 --------------- gnl|ti|818415084 name:POAA-aab51a11.b1 mate_pair:820217582 (905 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAF97977.1| unnamed protein product [Tetraodon nigrovir... 86 2e-015 ref|NP_914290.1| similar to 5-oxoprolinase [Oryza sativa (j... 86 2e-015 ref|NP_694762.1| 5-oxoprolinase (ATP-hydrolysing) [Mus musc... 83 1e-014 gb|AAH25120.1| Oplah protein [Mus musculus] 83 1e-014 gb|AAH85330.1| Oplah protein [Rattus norvegicus] >gi|598029... 82 2e-014 ref|XP_794494.1| PREDICTED: similar to 5-oxoprolinase (ATP-... 82 2e-014 ref|NP_446356.1| 5-oxoprolinase (ATP-hydrolysing) [Rattus n... 82 2e-014 gb|EAL25599.1| GA18405-PA [Drosophila pseudoobscura] 82 2e-014 ref|XP_695261.1| PREDICTED: similar to 5-oxo-L-prolinase [D... 82 2e-014 gb|EAA43140.2| ENSANGP00000025339 [Anopheles gambiae str. P... 82 3e-014 >emb|CAF97977.1| unnamed protein product [Tetraodon nigroviridis] Length = 1245 Score = 85.9 bits (211), Expect = 2e-015 Identities = 41/60 (68%), Positives = 52/60 (86%), Gaps = 5/60 (8%) Frame = +1
TE+D+VQLS+F+HRFM IAEQMG+ LQRTS+STNIKERLDFSCA+FG V+++P +P Sbjct: 736 TELDTVQLSIFSHRFMSIAEQMGRVLQRTSISTNIKERLDFSCAVFGPDGGLVSNAPHIP 795 Score = 48.9 bits (115), Expect = 2e-004 Identities = 25/50 (50%), Positives = 35/50 (70%) Frame = +3 Query: 306 NRYFIYRTEVDSVQLSVFAHRFLEIADHMGKTLQPTSIKKGYKGNRLFYS 455 +R + TE+D+VQLS+F+HRF+ IA+ MG+ LQ TSI K RL +S Sbjct: 729 DRQRVLGTELDTVQLSIFSHRFMSIAEQMGRVLQRTSISTNIK-ERLDFS 777 Score = 40.4 bits (93), Expect = 0.085 Identities = 22/32 (68%), Positives = 24/32 (75%), Gaps = 1/32 (3%) Frame = +2 Query: 182 TELDAVQLSFFAHRFMGIA-VMGRTLQPKSIA 274 TELD VQLS F+HRFM IA MGR LQ SI+ Sbjct: 736 TELDTVQLSIFSHRFMSIAEQMGRVLQRTSIS 767 ----------------- gnl|ti|820217582 name:POAA-aab51a11.g1 mate_pair:818415084 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 118 2e-025 gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 107 7e-022 ref|ZP_00374729.1| conserved hypothetical protein [Wolbachi... 75 2e-012 pir||A53577 ascites sialoglycoprotein 1 - rat (fragments) 45 0.003 gb|AAA85523.1| Heterodimeric complex composed of a mucin su... 45 0.003 gb|EAA19032.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.004 gb|EAA70046.1| conserved hypothetical protein [Gibberella z... 45 0.004 ref|XP_501606.1| hypothetical protein [Yarrowia lipolytica]... 44 0.006 ref|XP_639951.1| hypothetical protein DDB0186276 [Dictyoste... 44 0.006 gb|EAL25599.1| GA18405-PA [Drosophila pseudoobscura] 44 0.010 >sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein Length = 84 Score = 118 bits (296), Expect = 2e-025 Identities = 54/60 (90%), Positives = 57/60 (95%) Frame = -3
RHDLS L+AATGNRISRARYVGGATE LKWWPNYGYTRRTVFG+CA+LKPVTFG RVGSS Sbjct: 25 RHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGKRVGSS 84 ---------------- gnl|ti|818415092 name:POAA-aab51b08.b1 mate_pair:820217590 (903 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 350 4e-095 gb|AAV86079.1| chloramphenicol acetyltransferase [Shuttle v... 350 4e-095 ----------- gnl|ti|818415145 name:POAA-aab51g04.b1 mate_pair:820217646 (891 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 465 e-129 gb|AAC53603.1| chloramphenicol acetyltransferase 465 e-129 ------------ gnl|ti|820217646 name:POAA-aab51g04.g1 mate_pair:818415145 (895 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 259 7e-068 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 243 8e-063 --------- gnl|ti|818415428 name:POAA-aab52a05.g1 mate_pair:818412704 (889 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA90512.1| spherulin [Physarum polycephalum] 64 5e-009 sp|P09351|SR1B_PHYPO Spherulin-1B precursor >gi|161256|gb|A... 64 5e-009 dbj|BAA97098.1| unnamed protein product [Arabidopsis thaliana] 60 1e-007 sp|P09350|SR1A_PHYPO Spherulin-1A precursor >gi|161262|gb|A... 60 1e-007 pir||B29624 spherulin 1b precursor - slime mold (Physarum p... 60 1e-007 prf||1402254B spherulin 1b 60 1e-007 ref|XP_800750.1| PREDICTED: hypothetical protein XP_795657 ... 52 3e-005 emb|CAE70527.1| Hypothetical protein CBG17156 [Caenorhabdit... 51 5e-005 ref|XP_742542.1| conserved hypothetical protein [Plasmodium... 50 1e-004 sp|Q08696|MST2_DROHY Axoneme-associated protein mst101(2) >... 49 2e-004 >emb|CAA90512.1| spherulin [Physarum polycephalum] Length = 145
Identities = 29/30 (96%), Positives = 29/30 (96%) Frame = -3
INLPHTHPRATEINFIAKGRFQA FFLENQ Sbjct: 42 INLPHTHPRATEINFIAKGRFQAGFFLENQ 71 Score = 63.2 bits (152), Expect = 1e-008 Identities = 28/30 (93%), Positives = 28/30 (93%) Frame = -3 Query: 401 INLPHAHPRTTEINFIAKGRFQAGFFLENQ 312 INLPH HPR TEINFIAKGRFQAGFFLENQ Sbjct: 42 INLPHTHPRATEINFIAKGRFQAGFFLENQ 71 Score = 62.4 bits (150), Expect = 2e-008 Identities = 28/30 (93%), Positives = 29/30 (96%) Frame = -2 Query: 546 INLPNTHPRTTEINFIAKGRFQAGFFLENQ 457 INLP+THPR TEINFIAKGRFQAGFFLENQ Sbjct: 42 INLPHTHPRATEINFIAKGRFQAGFFLENQ 71 Score = 46.6 bits (109), Expect = 0.001 Identities = 20/21 (95%), Positives = 21/21 (100%) Frame = -3 Query: 683 INLPHTHPRATEINFIAKGRW 621 INLPHTHPRATEINFIAKGR+ Sbjct: 42 INLPHTHPRATEINFIAKGRF 62 Score = 38.9 bits (89), Expect = 0.24 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = -1 Query: 829 SLPNNPSSHNEINFIAKGRFKLDFFLENQ 743 +LP+ EINFIAKGRF+ FFLENQ Sbjct: 43 NLPHTHPRATEINFIAKGRFQAGFFLENQ 71 ------------------ gnl|ti|818415444 name:POAA-aab52b10.g1 mate_pair:818412719 (918 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_686616.1| PREDICTED: similar to GLE1-like RNA export... 50 8e-005 ref|XP_234436.2| PREDICTED: similar to GLE1-like, RNA expor... 49 2e-004 ref|XP_576079.1| PREDICTED: similar to GLE1-like, RNA expor... 46 0.002 ref|XP_234442.3| PREDICTED: similar to GLE1-like, RNA expor... 46 0.002 gb|AAH99088.1| GLE1 RNA export mediator-like (yeast [Rattus... 45 0.003 emb|CAH71065.1| GLE1 RNA export mediator-like (yeast) [Homo... 45 0.004 emb|CAH91138.1| hypothetical protein [Pongo pygmaeus] 45 0.004 emb|CAH71064.1| GLE1 RNA export mediator-like (yeast) [Homo... 45 0.004 dbj|BAE36148.1| unnamed protein product [Mus musculus] 45 0.004 dbj|BAE36515.1| unnamed protein product [Mus musculus] 45 0.004 >ref|XP_686616.1| PREDICTED: similar to GLE1-like RNA export mediator [Danio rerio] Length = 224
Identities = 21/37 (56%), Positives = 29/37 (78%), Gaps = 1/37 (2%) Frame = -3
GPHP+G+ HGW W+A+I N+ P+ +IT T+L FLEV Sbjct: 141 GPHPHGLNHGWRWMAQILNMEPLADITATILFDFLEV 177 Score = 37.0 bits (84), Expect = 0.97 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -3 Query: 745 YAKRKPGQSEVDFCKAMGYQQVEDNPPRLEEESTFYTRMEGAVRLYATIIQ 593 Y + G S D+ K +GY+ E ++E + +F RM G +RLYA IIQ Sbjct: 84 YPPMESGTSVEDYQKILGYRVDEG---KVEGQDSFLKRMSGMIRLYAAIIQ 131 ------------- gnl|ti|818412736 name:POAA-aab52d03.b1 mate_pair:818415459 (739 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAB01283.1| unnamed protein product [Arabidopsis thaliana] 75 3e-012 ref|NP_566820.1| protein transporter [Arabidopsis thaliana] 75 3e-012 gb|ABA99339.1| hypothetical protein LOC_Os12g35360 [Oryza s... 72 1e-011 ref|XP_643659.1| hypothetical protein DDB0202550 [Dictyoste... 68 4e-010 gb|AAH80417.1| LOC446301 protein [Xenopus laevis] 66 1e-009 gb|EAL31585.1| GA12833-PA [Drosophila pseudoobscura] 62 3e-008 gb|AAH32654.1| Vesicle docking protein p115 [Homo sapiens] 59 1e-007 gb|AAH45300.1| Vesicle docking protein p115 [Danio rerio] >... 59 1e-007 ref|XP_535607.2| PREDICTED: similar to General vesicular tr... 59 1e-007 ref|XP_702228.1| PREDICTED: hypothetical protein XP_697136 ... 59 1e-007 >dbj|BAB01283.1| unnamed protein product [Arabidopsis thaliana] Length = 924
Identities = 48/145 (33%), Positives = 76/145 (52%) Frame = -1
PV++ +LK R D++++R LE L+ +T PI + Q T Sbjct: 70 PVIVGILKDQRDDLEMVRGALETLLGALT-------------PI--------DHARAQKT 108
E V+ ++ + + L +E N+ +LSLLEE+D+Y+RY+T Q +T LL Sbjct: 109 E--VQAALMNSDLL-------------SREAENITLLLSLLEEEDFYVRYYTLQILTALL 153
N + LQ+A+L +P GI RLMD+L Sbjct: 154 MNSQNRLQEAILTTPRGITRLMDML 178 ----------- gnl|ti|818415459 name:POAA-aab52d03.g1 mate_pair:818412736 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAI75961.1| u5 small nuclear ribonucleoprotein-specific... 77 8e-013 ref|XP_469692.1| putative Sec63 domain containing protein [... 77 8e-013 ref|NP_173520.1| EMB1507; ATP binding / ATP-dependent helic... 77 8e-013 gb|EAN30588.1| ATP-dependent RNA helicase, putative [Theile... 77 8e-013 ref|XP_646493.1| hypothetical protein DDB0190760 [Dictyoste... 75 2e-012 gb|AAX26827.2| SJCHGC07374 protein [Schistosoma japonicum] 67 6e-010 ref|NP_181756.1| ATP binding / ATP-dependent helicase/ heli... 65 2e-009 ref|NP_702870.1| u5 small nuclear ribonucleoprotein-specifi... 65 4e-009 ref|XP_676317.1| u5 small nuclear ribonucleoprotein-specifi... 62 2e-008 gb|EAA00850.2| ENSANGP00000009625 [Anopheles gambiae str. P... 62 3e-008 >emb|CAI75961.1| u5 small nuclear ribonucleoprotein-specific helicase, putative [Theileria annulata] Length = 2248 Score = 77.0 bits (188), Expect = 8e-013 Identities = 39/75 (52%), Positives = 55/75 (73%) Frame = -3
I D + +QA +++L+IL D + EN+LV LL YE FDFVKLL+RNR KI +CTRLG Sbjct: 267 IYNDYNIAQATEKEILSILNIEDIQECENKLVLLLKYENFDFVKLLLRNRYKIIYCTRLG 326
+AQ+++E+ +I EM Sbjct: 327 QAQSQDEKNKIFDEM 341 -------------- gnl|ti|818415472 name:POAA-aab52e06.g1 mate_pair:818412748 (380 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer ar... 63 3e-009 emb|CAJ05071.1| dynein heavy chain, putative [Leishmania ma... 62 6e-009 ref|XP_419480.1| PREDICTED: similar to axonemal dynein heav... 59 5e-008 gb|AAX69891.1| dynein heavy chain, putative [Trypanosoma br... 59 7e-008 ref|NP_038839.1| dynein, axonemal, heavy chain 8 [Mus muscu... 58 1e-007 gb|AAK60622.1| axonemal dynein heavy chain 8 short form [Mu... 58 1e-007 gb|AAK60621.1| axonemal dynein heavy chain 8 long form [Mus... 58 1e-007 gb|AAK60624.1| axonemal dynein heavy chain 8 short form 1 [... 58 1e-007 ref|XP_784635.1| PREDICTED: similar to dynein, axonemal, he... 57 2e-007 ref|XP_532130.2| PREDICTED: similar to dynein, axonemal, he... 57 2e-007 >sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm gb|AAA50455.1| gamma heavy chain subunit of outer-arm dynein Length = 4485 Score = 63.2 bits (152), Expect = 3e-009 Identities = 29/72 (40%), Positives = 46/72 (63%) Frame = +2
AW KSI+ +A A LL + P+TG+I+VNFD+ + L EAKY+ + I ++ +L Sbjct: 630 AWIKSIEQCKAGLAAPLLVQHPDTGKILVNFDKEIMQLVREAKYMQRFNIRCSSPSQMVL 689
+QEE+FK + + Sbjct: 690 LQEEKFKFYHNQ 701 ---------- gnl|ti|818412755 name:POAA-aab52f01.b1 mate_pair:818415478 (906 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 465 e-129 gb|AAC53603.1| chloramphenicol acetyltransferase 465 e-129 dbj|BAA03718.1| PP-CAT [Photobacterium damselae subsp. pisc... 464 e-129 ----------- gnl|ti|818415478 name:POAA-aab52f01.g1 mate_pair:818412755 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 258 1e-067 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 241 2e-062 ------------ gnl|ti|818415490 name:POAA-aab52g01.g1 mate_pair:818412767 (918 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_637962.1| spindle pole body component 97 [Dictyostel... 72 4e-011 sp|Q95ZG3|SPC97_DICDI Spindle pole body component 97 (Spc97... 72 4e-011 gb|EAA11766.2| ENSANGP00000007228 [Anopheles gambiae str. P... 67 7e-010 gb|EAL32274.1| GA17771-PA [Drosophila pseudoobscura] 67 7e-010 ref|XP_788563.1| PREDICTED: similar to tubulin, gamma compl... 66 2e-009 emb|CAG03012.1| unnamed protein product [Tetraodon nigrovir... 63 1e-008 emb|CAH92970.1| hypothetical protein [Pongo pygmaeus] 62 4e-008 ref|NP_956416.1| tubulin, gamma complex associated protein ... 61 5e-008 dbj|BAE27420.1| unnamed protein product [Mus musculus] 61 5e-008 dbj|BAE39929.1| unnamed protein product [Mus musculus] 61 5e-008 >ref|XP_637962.1| spindle pole body component 97 [Dictyostelium discoideum] gb|EAL64459.1| spindle pole body component 97 [Dictyostelium discoideum] Length = 1335 Score = 71.6 bits (174), Expect = 4e-011 Identities = 39/113 (34%), Positives = 62/113 (54%) Frame = -2
MM+EV+EPNW+K + + + +TVD+V++IH DF+++CL ECMLTD +LV Sbjct: 1003 MMLEVLEPNWNKMKNSIKTSKTVDDVIRIHNDFLETCLTECMLTDTKLV----------- 1051
N + + +T A+FT+++ T I T+ S FH L + Sbjct: 1052 ----NILMKFMSLCITFANFTNEMMQDEKNIDTEQIKKTISSSENKFHAILKV 1100 ------------ gnl|ti|818412788 name:POAA-aab52h10.b1 mate_pair:818415511 (920 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAA76305.1| polyurethane esterase [Delftia acidovorans] 60 1e-007 ref|NP_942417.1| hypothetical protein slr8023 [Synechocysti... 55 3e-006 ref|ZP_00874054.1| Carboxylesterase, type B [Novosphingobiu... 53 1e-005 ref|ZP_00811406.1| Carboxylesterase, type B:Protein of unkn... 52 2e-005 ref|ZP_00808123.1| IMP dehydrogenase/GMP reductase:Carboxyl... 52 2e-005 ref|NP_821608.1| putative carboxylesterase [Streptomyces av... 52 3e-005 ref|NP_296345.1| carboxylesterase, type B [Deinococcus radi... 52 3e-005 ref|ZP_00395413.1| Carboxylesterase, type B [Deinococcus ge... 51 5e-005 ref|YP_362973.1| carboxylesterase [Xanthomonas campestris p... 50 1e-004 ref|NP_641549.1| carboxylesterase, type B [Xanthomonas axon... 49 2e-004 >dbj|BAA76305.1| polyurethane esterase [Delftia acidovorans] Length = 548
Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = +1
+R+G +GFL HP+L + G VG YGI DQ+AAL+WVQDNI FGG Sbjct: 170 YRMGAMGFLGHPSLRAAD--GTVGNYGIMDQQAALRWVQDNIAAFGG 214 Score = 39.7 bits (91), Expect = 0.15 Identities = 18/30 (60%), Positives = 21/30 (70%) Frame = +2 Query: 395 DKNRVTVSGESAGAISICMHLALPKSNGLF 484 DK+ VT+ GESAG S+ HLA P S GLF Yüklə 3,49 Mb. Dostları ilə paylaş:
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