Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|XP_590207.2| PREDICTED: similar to CG7092-PA, partial [... 55 2e-006 dbj|BAB21788.2| KIAA1697 protein [Homo sapiens] 55 3e-006 emb|CAD87807.1| SI:zC220F6.1 (novel protein similar to huma... 54 5e-006 gb|AAA63591.1| dynein heavy chain isotype 5A 54 5e-006 ref|XP_532984.2| PREDICTED: similar to CG7092-PA [Canis fam... 54 5e-006 ref|XP_395072.2| PREDICTED: similar to CG7092-PA [Apis mell... 53 1e-005 ref|XP_786228.1| PREDICTED: similar to CG7092-PA [Strongylo... 52 1e-005 >ref|NP_001028827.1| dynein, axonemal, heavy polypeptide 1 [Rattus norvegicus] Length = 4516
Identities = 25/49 (51%), Positives = 38/49 (77%) Frame = -2
N +H + P+VN+++ +Y ++LLPTP+K HY+FN+RDLSKVFQG+ Sbjct: 2637 NIVH--MTEPLVNATISIYAIITSQLLPTPAKSHYTFNLRDLSKVFQGI 2683 Score = 36.6 bits (83), Expect = 0.79 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -1 Query: 315 IMQVKSKAISTSDSMIRLWCHECMRVFHDRLINNTDR 205 I+ + + ++RLW HE RVF DRL+N DR Sbjct: 2683 ILMAEPAKVEDKVQLLRLWYHENCRVFRDRLVNEEDR 2719 ---------------- gnl|ti|820220714 name:POAA-aaa77l04.b1 mate_pair:818420196 (553 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_797925.1| PREDICTED: similar to dynein, axonemal, he... 58 2e-007 gb|AAA63590.1| dynein heavy chain isotype 5C 57 3e-007 ref|XP_546598.2| PREDICTED: similar to 1-beta dynein [Canis... 56 7e-007 ref|XP_396228.2| PREDICTED: similar to novel protein simila... 56 7e-007 ref|XP_511954.1| PREDICTED: hypothetical protein XP_511954 ... 54 2e-006 ref|XP_085578.7| PREDICTED: FLJ46675 protein [Homo sapiens] 54 2e-006 ref|NP_065928.2| protein similar to dynein [Homo sapiens] 54 2e-006 dbj|BAA96027.2| KIAA1503 protein [Homo sapiens] 54 2e-006 ref|XP_683805.1| PREDICTED: similar to CG17866-PA.3, partia... 54 2e-006 emb|CAG12582.1| unnamed protein product [Tetraodon nigrovir... 54 2e-006 >ref|XP_797925.1| PREDICTED: similar to dynein, axonemal, heavy polypeptide 1, partial [Strongylocentrotus purpuratus] Length = 2581 Score = 57.8 bits (138), Expect = 2e-007 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = -2
NMPAKD +G QP L + W+DYGFW DR KQ F + MQ++ S+ PP + K+ Sbjct: 1784 NMPAKDTFGSQPPLELIKLWVDYGFWYDRVKQTTKFIKGMQLLASMGPPGGGRMVISKR 1842 Score = 36.6 bits (83), Expect = 0.46 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = -1 Query: 508 SNRGQEIIEGNVERGTKDVYVPQNGRKMIS 419 SN Q+IIE VE+ TK VYVP G+K+++ Sbjct: 1749 SNNVQDIIESRVEKRTKGVYVPIGGKKLVT 1778 ---------------- gnl|ti|818420225 name:POAA-aaa77p20.g1 mate_pair:820220739 (288 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_644797.1| hypothetical protein DDB0168130 [Dictyoste... 52 7e-006 gb|AAH54635.1| Hypothetical protein LOC393390 [Danio rerio]... 50 2e-005 ref|XP_416611.1| PREDICTED: similar to hypothetical protein... 48 9e-005 gb|AAH75487.1| MGC89325 protein [Xenopus tropicalis] >gi|52... 48 1e-004 ref|XP_874267.1| PREDICTED: similar to CG10038-PB, isoform ... 47 2e-004 ref|XP_851856.1| PREDICTED: similar to CG10038-PB, isoform ... 45 6e-004 emb|CAG31899.1| hypothetical protein [Gallus gallus] >gi|57... 45 8e-004 ref|XP_067605.3| PREDICTED: similar to hypothetical protein... 45 0.001 ref|XP_517655.1| PREDICTED: similar to KIAA0825 protein [Pa... 44 0.001 gb|AAH57380.1| 1110033M05Rik protein [Mus musculus] 44 0.001 >ref|XP_644797.1| hypothetical protein DDB0168130 [Dictyostelium discoideum] ref|XP_644453.1| hypothetical protein DDB0217250 [Dictyostelium discoideum] gb|AAO51466.1| similar to Homo sapiens (Human). Similar to hypothetical protein DKFZp564D172 [Dictyostelium discoideum] gb|EAL70836.1| hypothetical protein DDB0168130 [Dictyostelium discoideum] gb|EAL70527.1| hypothetical protein DDB0217250 [Dictyostelium discoideum] Length = 385 Score = 52.0 bits (123), Expect = 7e-006 Identities = 25/37 (67%), Positives = 30/37 (81%) Frame = +2
V+D FI KSPAK+IVIVAHS+GGV T LL NR E++ Sbjct: 262 VYDEFIKKSPAKEIVIVAHSFGGVNTTYLLDNRGEEI 298 --------------------------- gnl|ti|820220895 name:POAA-aaa78a07.b1 mate_pair:818420396 (788 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_646415.1| hypothetical protein DDB0190682 [Dictyoste... 133 8e-030 emb|CAI41926.1| HLA-B associated transcript 1 [Homo sapiens] 127 3e-028 dbj|BAD88115.1| putative HLA-B associated transcript 1 [Ory... 126 9e-028 dbj|BAD88053.1| putative HLA-B associated transcript 1 [Ory... 126 9e-028 emb|CAG32653.1| hypothetical protein [Gallus gallus] >gi|61... 125 2e-027 ref|XP_801787.1| PREDICTED: similar to HLA-B-associated tra... 125 2e-027 ref|XP_779919.1| PREDICTED: similar to HLA-B-associated tra... 125 2e-027 emb|CAA56197.1| WM6 [Drosophila melanogaster] >gi|22945675|... 124 3e-027 gb|AAH61280.1| HLA-B-associated transcript 1A [Xenopus trop... 124 3e-027 gb|AAH82368.1| MGC81606 protein [Xenopus laevis] 124 3e-027 >ref|XP_646415.1| hypothetical protein DDB0190682 [Dictyostelium discoideum] gb|EAL72316.1| hypothetical protein DDB0190682 [Dictyostelium discoideum] Length = 428 Score = 133 bits (334), Expect = 8e-030 Identities = 68/115 (59%), Positives = 80/115 (69%) Frame = -3
+HPSEVQ++CIPQAILGTDVICQAKSGMGKTAVFVLS LQQ+D NP + Sbjct: 69 EHPSEVQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNPNGI----------- 117
+ LVLC RELAYQI EFDRF KYLP +KTAV +GG+P +K ++ Sbjct: 118 -------TTLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIK 165
Identities = 30/85 (35%), Positives = 46/85 (54%) Frame = -2
MA + + + ++L +Y++ DE + D + +N +D HVA Sbjct: 1 MAETNPEVDISELAEYEEESDEEVQNDVTD------------TKNKTANRADT----HVA 44
+HS+GF++FLLKPEL R I DCGFE Sbjct: 45 MHSSGFREFLLKPELERVIGDCGFE 69 ----------------- PP23_Resultat
mate_pair:820220933 (791 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAC38063.1| PKS module 3 [Streptomyces hygroscopicus] 56 1e-006 gb|AAC38061.1| PKS module 1 [Streptomyces hygroscopicus] 56 1e-006 gb|ABA29782.1| MmxB [Cystobacter fuscus] 56 1e-006 gb|AAQ84157.1| Plm2-3 [Streptomyces sp. HK803] 55 2e-006 gb|AAY00025.1| SA1_PKSA [uncultured bacterial symbiont of D... 55 2e-006 emb|CAD19088.1| StiD protein [Stigmatella aurantiaca] 55 3e-006 gb|AAY00027.1| SA1_PKSC [uncultured bacterial symbiont of D... 55 3e-006 emb|CAD19087.1| StiC protein [Stigmatella aurantiaca] 54 8e-006 emb|CAG25973.1| polyketide synthase I [uncultured bacterium] 53 1e-005 emb|CAD19089.1| StiE protein [Stigmatella aurantiaca] 53 1e-005 >gb|AAC38063.1| PKS module 3 [Streptomyces hygroscopicus] Length = 2100 Score = 56.2 bits (134), Expect = 1e-006 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 6/90 (6%) Frame = -3
VFPGQGSQW+G G L++T P++R + ID+ L E S+ +I+ S P D+ +V Sbjct: 568 VFPGQGSQWVGMGQRLWETSPLYRDTIHEIDTALSEYIDWSVTDILTSQPGAPTWDRVDV 627
QP+ F L HH A GHS Sbjct: 628 IQPVLFTTMTALATLWQHHGLTPDAIIGHS 657 --------------- gnl|ti|820220949 name:POAA-aaa78k21.b1 mate_pair:818420454 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_644631.1| hypothetical protein DDB0217164 [Dictyoste... 253 5e-066 emb|CAE69834.1| Hypothetical protein CBG16158 [Caenorhabdit... 210 6e-053 gb|AAH81786.1| Adaptor protein complex AP-2, alpha 2 subuni... 209 1e-052 ref|NP_031485.2| adaptor protein complex AP-2, alpha 2 subu... 209 1e-052 dbj|BAC40392.1| unnamed protein product [Mus musculus] 209 1e-052 dbj|BAD32332.1| mKIAA0899 protein [Mus musculus] 209 1e-052 ref|NP_112270.1| adaptor protein complex AP-2, alpha 2 subu... 209 1e-052 ref|XP_533200.2| PREDICTED: similar to Adapter-related prot... 209 1e-052 dbj|BAE31240.1| unnamed protein product [Mus musculus] 209 1e-052 sp|P17427|AP2A2_MOUSE Adapter-related protein complex 2 alp... 209 1e-052 >ref|XP_644631.1| hypothetical protein DDB0217164 [Dictyostelium discoideum] ref|XP_644619.1| hypothetical protein DDB0168211 [Dictyostelium discoideum] gb|AAO51059.1| hypothetical protein [Dictyostelium discoideum] gb|EAL70705.1| hypothetical protein DDB0217164 [Dictyostelium discoideum] gb|EAL70674.1| hypothetical protein DDB0168211 [Dictyostelium discoideum] Length = 989 Score = 253 bits (647), Expect = 5e-066 Identities = 133/206 (64%), Positives = 150/206 (72%) Frame = -1
T+ +SLKD+DISIRRRALDLLYGMCDK T K IV ELL+YL TADYAIREELVIK+A LA Sbjct: 376 TVLLSLKDSDISIRRRALDLLYGMCDKNTCKHIVAELLSYLQTADYAIREELVIKIANLA 435
EKFASNY WYVDVILQLIT AGDFVSDDIW RV+KIVTNHED+Q Sbjct: 436 EKFASNYSWYVDVILQLITTAGDFVSDDIWFRVVKIVTNHEDIQ---------------- 479
YAA TVF ALQ HET +KVGGYILGEFGHLI++ P+S+P +Q Sbjct: 480 --------------AYAASTVFNALQSRNCHETLIKVGGYILGEFGHLIADNPQSSPLVQ 525
F +LH+KF TCG T+A+LLSTY F Sbjct: 526 FNILHSKFNTCGAPTKALLLSTYAKF 551 ------------------------- gnl|ti|820220954 name:POAA-aaa78m13.b1 mate_pair:818420460 (717 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_181756.1| ATP binding / ATP-dependent helicase/ heli... 92 1e-017 gb|EAA00850.2| ENSANGP00000009625 [Anopheles gambiae str. P... 86 1e-015 gb|AAV37006.1| LD03265p [Drosophila melanogaster] >gi|28380... 85 3e-015 gb|EAL30943.1| GA19239-PA [Drosophila pseudoobscura] 85 3e-015 dbj|BAB14698.1| unnamed protein product [Homo sapiens] 84 3e-015 ref|XP_515629.1| PREDICTED: similar to U5 snRNP-specific pr... 82 2e-014 ref|XP_870424.1| PREDICTED: similar to activating signal co... 82 2e-014 ref|XP_880781.1| PREDICTED: similar to activating signal co... 82 2e-014 ref|XP_795274.1| PREDICTED: similar to activating signal co... 82 2e-014 ref|XP_791805.1| PREDICTED: similar to activating signal co... 82 2e-014 >ref|NP_181756.1| ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] gb|AAB88651.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] Length = 2172
Identities = 42/65 (64%), Positives = 51/65 (78%) Frame = -2
GM LNRVQS++Y TA F ADN LLCAPTGAGKTNVA+L LH++GLNM+ G N N+ Sbjct: 502 GMQQLNRVQSKVYGTALFKADNILLCAPTGAGKTNVAVLTILHQLGLNMNPGGTFNHGNY 561
KI+Y+
Sbjct: 562 KIVYV 566 Score = 52.4 bits (124), Expect = 1e-005 Identities = 22/37 (59%), Positives = 32/37 (86%) Frame = -3 Query: 136 YIAPMKSLVQEMVNNFSQRLSSYGIVVRELTGDQALT 26 Y+APMK+LV E+V++ SQRL +G+ V+EL+GDQ+LT Sbjct: 565 YVAPMKALVAEVVDSLSQRLKDFGVTVKELSGDQSLT 601 Score = 34.3 bits (77), Expect = 4.1 Identities = 15/37 (40%), Positives = 25/37 (67%) Frame = -2 Query: 617 NRVQSRLYQTAFFSADNFLLCAPTGAGKTNVAMLAFL 507 N VQ++++ + ++DN ++ APTG+GKT A A L Sbjct: 1353 NPVQTQVFTVLYNTSDNVVVAAPTGSGKTICAEFAIL 1389 ---------------------------- gnl|ti|818420460 name:POAA-aaa78m13.g1 mate_pair:820220954 (898 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_646493.1| hypothetical protein DDB0190760 [Dictyoste... 69 2e-010 ref|NP_173520.1| EMB1507; ATP binding / ATP-dependent helic... 62 4e-008 emb|CAF92185.1| unnamed protein product [Tetraodon nigrovir... 58 4e-007 ref|XP_745111.1| u5 small nuclear ribonucleoprotein-specifi... 56 1e-006 gb|EAA15876.1| Drosophila melanogaster CG5931 gene product-... 56 1e-006 ref|XP_675589.1| hypothetical protein PB000999.02.0 [Plasmo... 56 2e-006 ref|XP_674012.1| hypothetical protein PB300742.00.0 [Plasmo... 56 2e-006 ref|XP_708204.1| PREDICTED: similar to U5 snRNP-specific pr... 52 4e-005 ref|XP_685958.1| PREDICTED: similar to activating signal co... 52 4e-005 ref|NP_702870.1| u5 small nuclear ribonucleoprotein-specifi... 49 2e-004 >ref|XP_646493.1| hypothetical protein DDB0190760 [Dictyostelium discoideum] gb|EAL72371.1| hypothetical protein DDB0190760 [Dictyostelium discoideum] Length = 2237
Identities = 31/56 (55%), Positives = 40/56 (71%) Frame = +1
+NSNLV SE S EP GE E+LWG+L G+MGD+ NYSKP EL EK+ +++K Sbjct: 15 ENSNLVFYSERNRSELKEPKGEPETLWGRLRGEMGDRVNYSKPLELLEKMQNLKRK 70 ------------------ gnl|ti|818420464 name:POAA-aaa78m21.g1 mate_pair:820220958 (824 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_691431.1| PREDICTED: similar to polycystin 1-like 2 ... 50 9e-005 emb|CAG09587.1| unnamed protein product [Tetraodon nigrovir... 47 8e-004 emb|CAF99619.1| unnamed protein product [Tetraodon nigrovir... 47 0.001 ref|NP_083962.1| polycystin 1-like 2 [Mus musculus] >gi|313... 46 0.001 ref|XP_425128.1| PREDICTED: similar to polycystic kidney di... 46 0.001 ref|XP_428607.1| PREDICTED: similar to polycystic kidney di... 46 0.002 ref|XP_414854.1| PREDICTED: similar to polycystin 1; polycy... 46 0.002 ref|NP_035235.1| receptor for egg jelly-like protein [Mus m... 46 0.002 ref|XP_780860.1| PREDICTED: similar to polycystin-1L1 [Stro... 45 0.002 dbj|BAE32984.1| unnamed protein product [Mus musculus] 45 0.003 >ref|XP_691431.1| PREDICTED: similar to polycystin 1-like 2 [Danio rerio] Length = 1400 Score = 50.1 bits (118), Expect = 9e-005 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = -3
LGE+Q IR+ HDN+ AWY+ + TV +G+ W F NSW + Sbjct: 662 LGELQSIRLWHDNSGYYPAWYVNKVTVQDLENGQKWHFLCNSWLSI 707 -------------- gnl|ti|818420466 name:POAA-aaa78o01.g1 mate_pair:820220959 (716 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_359987.1| hypothetical protein MG05362.4 [Magnaporth... 60 7e-008 gb|EAL89519.1| transcription effector [Aspergillus fumigatu... 58 3e-007 ref|XP_759277.1| hypothetical protein UM03130.1 [Ustilago m... 56 1e-006 gb|EAA69565.1| hypothetical protein FG02043.1 [Gibberella z... 54 6e-006 ref|XP_661206.1| hypothetical protein AN3602.2 [Aspergillus... 52 2e-005 emb|CAC28578.1| related to CCR4 protein [Neurospora crassa]... 51 3e-005 ref|XP_780366.1| PREDICTED: similar to scribble isoform b [... 50 5e-005 gb|AAS51514.1| ACR288Wp [Ashbya gossypii ATCC 10895] >gi|45... 50 7e-005 emb|CAG88862.1| unnamed protein product [Debaryomyces hanse... 49 1e-004 ref|XP_468498.1| putative disease resistance protein Hcr2-5... 49 2e-004 >ref|XP_359987.1| hypothetical protein MG05362.4 [Magnaporthe grisea 70-15] Length = 1626 Score = 60.1 bits (144), Expect = 7e-008 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Frame = +1
+ L+ HN L +PP +G CT L L L +N IHTLP E+G LH ++ ++GNPL+ + Sbjct: 1147 RILDASHNMLKDLPPEIGMCTSLKQLLLFNNQIHTLPHEVGSLHHLEQLGIEGNPLDPEI 1206
M +
Sbjct: 1207 MSV 1209 ------------- gnl|ti|818423459 name:POAA-aaa79a08.g1 mate_pair:818422433 (830 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA67586.1| hypothetical protein FG01473.1 [Gibberella z... 151 2e-035 ref|XP_370207.1| hypothetical protein MG06704.4 [Magnaporth... 145 1e-033 emb|CAC36922.1| SPAPB1E7.05 [Schizosaccharomyces pombe] >gi... 123 9e-027 pir||T42379 PHO85-like protein - fission yeast (Schizosacch... 120 7e-026 emb|CAB92623.1| related to multifunctional cyclin-dependent... 115 2e-024 ref|NP_942074.1| hypothetical protein LOC362219 [Rattus nor... 114 4e-024 ref|XP_635906.1| hypothetical protein DDB0188719 [Dictyoste... 113 9e-024 emb|CAE67763.1| Hypothetical protein CBG13338 [Caenorhabdit... 111 3e-023 emb|CAE48507.1| Hypothetical protein T05H10.7b [Caenorhabdi... 109 1e-022 emb|CAA87796.1| Hypothetical protein T05H10.7a [Caenorhabdi... 109 1e-022 >gb|EAA67586.1| hypothetical protein FG01473.1 [Gibberella zeae PH-1] ref|XP_381649.1| hypothetical protein FG01473.1 [Gibberella zeae PH-1] Length = 1173
Identities = 96/285 (33%), Positives = 147/285 (51%), Gaps = 42/285 (14%) Frame = +2
QG + PIM S+FDV+GTV F++ VITPF H ++ +R+ + K L+GHRG G Sbjct: 752 QGDVCVPIMSSNFDVIGTVNFNFLVITPFHHPNMEVTSRQTYWKKLESTMLIGHRGLGKN 811
+ + + ENTL SF A +GA +VEFD LT D VPVIYHDF +S +GI + Sbjct: 812 -----LTSNKSLQLGENTLPSFIAAANLGAHYVEFDVQLTKDHVPVIYHDFLVSETGIDA 866
P+H+L+LE+F + S R + +F+ + P+ P Sbjct: 867 PVHTLTLEQFLHINSDKSRDSQQQAKKKPPHSGVPGDFRARSNSVAPKRSQSMGFAGSGP 926
D ++ F F TL++ +++P ++GFN+E+KYP E E Sbjct: 927 DDLDERMKHTKDFKEQGFKGNTRGNFIQAPFATLEDLFRELPEHVGFNIEMKYPMLHESE 986
H + + N++ D +L V++ + +R I+FSSF+P I L CL Sbjct: 987 EHEMDTYAVELNSFCDTVLSKVYDLSGERHIIFSSFNPDICL-CL 1030 -------------- gnl|ti|818422447 name:POAA-aaa79c18.b1 mate_pair:818423473 (912 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAP45180.1| unknown [Solanum bulbocastanum] 92 3e-017 gb|AAT76373.1| putative Mob1/phocein family protein [Oryz... 91 4e-017 ref|XP_463026.1| putative Mob1-like protein [Oryza sativa (... 91 4e-017 ref|XP_629473.1| hypothetical protein DDB0184547 [Dictyoste... 86 2e-015 ref|XP_629005.1| hypothetical protein DDB0219874 [Dictyoste... 81 4e-014 gb|AAY41047.1| unknown [Homo sapiens] 72 2e-011 ref|NP_081011.1| MOB1, Mps One Binder kinase activator-like... 72 2e-011 ref|XP_420601.1| PREDICTED: similar to MOB1, Mps One Binder... 72 2e-011 ref|XP_341195.2| PREDICTED: similar to Mps one binder kinas... 72 2e-011 ref|XP_393046.2| PREDICTED: similar to CG13852-PA [Apis mel... 72 4e-011 >gb|AAP45180.1| unknown [Solanum bulbocastanum] Length = 218 Score = 91.7 bits (226), Expect = 3e-017 Identities = 50/125 (40%), Positives = 62/125 (49%) Frame = -2
QL + + ATLGSG+L A++LPPGEDINEWLAVN+ Sbjct: 27 QLRKHIDATLGSGNLREAVRLPPGEDINEWLAVNT------------------------- 61
+DFFNQVNLLYG++ EFCTP++CP M+AGPKY Sbjct: 62 ----------------------------VDFFNQVNLLYGTLTEFCTPENCPTMTAGPKY 93
V Y
Sbjct: 94 VQYEY 98 -------------------- gnl|ti|818422455 name:POAA-aaa79e12.b1 mate_pair:818423481 (906 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAA93630.1| G protein alpha subunit [Halocynthia roretzi] 60 1e-007 gb|AAB24072.2| G-protein alpha i subunit [Homarus americanus] 58 4e-007 sp|P41776|GNAI_HOMAM Guanine nucleotide-binding protein G(i... 58 4e-007 emb|CAA47019.1| G protein alpha subunit [Asterina pectinife... 57 1e-006 dbj|BAA81705.1| G protein a subunit 9 [Ephydatia fluviatilis] 56 2e-006 emb|CAA78807.1| GTP-binding protein alpha-i subunit [Lymnae... 56 2e-006 sp|P51876|GNAI_HELTI Guanine nucleotide-binding protein G(i... 56 2e-006 gb|AAS38581.1| guanine nucleotide-binding protein G(i) alph... 55 3e-006 pdb|1GIT| Structure Of Gtp-Binding Protein >gi|1942391|pdb... 54 6e-006 gb|AAF60904.1| G protein, alpha subunit protein 16 [Caenorh... 54 1e-005 >dbj|BAA93630.1| G protein alpha subunit [Halocynthia roretzi] Length = 357 Score = 59.7 bits (143), Expect = 1e-007 Identities = 25/54 (46%), Positives = 37/54 (68%) Frame = +3
L +D + +P YIPT D+LRTRV+TTGI E T+ Y N+NFT + ++ ++K Sbjct: 158 LDALDRLCSPDYIPTEQDVLRTRVKTTGIIETTFQYKNLNFTLIDVGGQRSERK 211 -------------- gnl|ti|818423487 name:POAA-aaa79g02.g1 (480 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAA53039.1| heat shock protein (hsc70) [Dictyostelium d... 50 3e-005 ref|XP_646617.1| heat shock cognate protein Hsc70-1 [Dictyo... 50 3e-005 gb|AAA33219.1| heat shock protein 50 3e-005 gb|AAF75877.1| heat shock protein 70 [Cryptosporidium serpe... 49 6e-005 emb|CAA67867.1| heat shock protein hsp70 [Pisum sativum] >g... 49 6e-005 gb|AAC72002.1| heat shock protein 70 [Toxoplasma gondii] 49 8e-005 gb|AAD09230.1| heat shock protein 70 [Toxoplasma gondii] >g... 49 8e-005 gb|AAC26629.1| heat shock protein 70 [Toxoplasma gondii] 49 8e-005 ref|XP_629089.1| hypothetical protein DDB0192086 [Dictyoste... 49 8e-005 dbj|BAB20284.1| hsp70 [Toxoplasma gondii] 49 8e-005 >emb|CAA53039.1| heat shock protein (hsc70) [Dictyostelium discoideum] sp|P36415|HSP7C_DICDI Heat shock cognate protein (Aginactin) Length = 640
Identities = 22/41 (53%), Positives = 33/41 (80%) Frame = +1
Yüklə 3,49 Mb. Dostları ilə paylaş:
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