Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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mate_pair:818410749 (916 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_502101.1| hypothetical protein [Yarrowia lipolytica]... 67 7e-010 gb|AAO51574.1| similar to Arabidopsis thaliana (Mouse-ear c... 66 1e-009 ref|XP_645553.1| hypothetical protein DDB0216865 [Dictyoste... 66 1e-009 gb|AAS50267.1| AAL099Cp [Ashbya gossypii ATCC 10895] >gi|45... 64 6e-009 gb|AAL13918.1| LD40801p [Drosophila melanogaster] 63 1e-008 gb|AAF59191.2| CG1925-PA [Drosophila melanogaster] >gi|1109... 63 1e-008 ref|XP_479444.1| DNA polymerase zeta catalytic subunit-like... 63 1e-008 gb|EAL24900.1| GA15135-PA [Drosophila pseudoobscura] 63 1e-008 gb|EAA01813.3| ENSANGP00000009889 [Anopheles gambiae str. P... 62 3e-008 ref|XP_595591.2| PREDICTED: similar to DNA polymerase zeta ... 62 4e-008 >ref|XP_502101.1| hypothetical protein [Yarrowia lipolytica] emb|CAG82421.1| unnamed protein product [Yarrowia lipolytica CLIB122] Length = 1338
Identities = 28/33 (84%), Positives = 33/33 (100%) Frame = +1
R+YTSPVLVLDFQSLYPS+I+A+NYCY+TCLGK Sbjct: 805 RLYTSPVLVLDFQSLYPSVILAHNYCYSTCLGK 837 Score = 65.9 bits (159), Expect = 2e-009 Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = +1 Query: 388 RMYTSPVLVLDFQSLYPSIIIAHNYCYTTCLRRVVPADK 504 R+YTSPVLVLDFQSLYPS+I+AHNYCY+TCL + +K Sbjct: 805 RLYTSPVLVLDFQSLYPSVILAHNYCYSTCLGKWTDFEK 843 Score = 34.3 bits (77), Expect = 6.2 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +1 Query: 214 NPVLVLDFQSLYPPIIIAY 270 +PVLVLDFQSLYP +I+A+ Sbjct: 809 SPVLVLDFQSLYPSVILAH 827 ------------------- gnl|ti|818411111 name:POAA-aaa95f06.g1 mate_pair:818410770 (886 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAG04172.1| unnamed protein product [Tetraodon nigrovir... 127 4e-028 gb|AAH68393.1| Unknown (protein for IMAGE:6961702) [Danio r... 125 3e-027 ref|NP_955934.1| hypothetical protein LOC323452 [Danio reri... 125 3e-027 emb|CAD71035.1| probable methionyl aminopeptidase [Neurospo... 122 2e-026 ref|XP_323646.1| hypothetical protein [Neurospora crassa] >... 122 2e-026 ref|XP_624161.1| PREDICTED: similar to CG4008-PA [Apis mell... 122 2e-026 gb|AAC05144.1| methionine aminopeptidase [Drosophila melano... 121 3e-026 gb|AAF52807.1| CG4008-PA [Drosophila melanogaster] >gi|1501... 121 3e-026 ref|XP_368278.1| hypothetical protein MG00966.4 [Magnaporth... 120 5e-026 gb|EAL33421.1| GA17851-PA [Drosophila pseudoobscura] 120 5e-026 >emb|CAG04172.1| unnamed protein product [Tetraodon nigroviridis] Length = 486 Score = 127 bits (320), Expect = 4e-028 Identities = 59/80 (73%), Positives = 64/80 (80%) Frame = +3
N G+ FPTGCSLNH AAHYTPN GD TVLQYDDV KIDFG H+ GRIID AFT NP+Y Sbjct: 209 NAGLAFPTGCSLNHCAAHYTPNAGDTTVLQYDDVCKIDFGTHINGRIIDCAFTVTFNPKY 268
LLEAVREATN GI+ AG+ Sbjct: 269 DKLLEAVREATNTGIKNAGI 288 Score = 63.2 bits (152), Expect = 1e-008 Identities = 30/45 (66%), Positives = 33/45 (73%) Frame = +2 Query: 587 VMKTDFGVHVRGRIIDSAFTWAANPRYANLLEAVREATNAGIRTA 721 V K DFG H+ GRIID AFT NP+Y LLEAVREATN GI+ A Sbjct: 242 VCKIDFGTHINGRIIDCAFTVTFNPKYDKLLEAVREATNTGIKNA 286 Score = 56.2 bits (134), Expect = 1e-006 Identities = 26/39 (66%), Positives = 30/39 (76%) Frame = +2 Query: 428 HVRGRIIDSAFTWAANPRYANLLEAVREATNAGIRTAGM 544 H+ GRIID AFT NP+Y LLEAVREATN GI+ AG+ Sbjct: 250 HINGRIIDCAFTVTFNPKYDKLLEAVREATNTGIKNAGI 288 --------------------- gnl|ti|818410773 name:POAA-aaa95f11.b1 mate_pair:818411116 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|YP_309947.1| IS1 ORF [Shigella sonnei Ss046] >gi|738550... 394 e-108 ref|NP_417902.1| IS1 protein InsB [Escherichia coli K12] >g... 349 8e-095 ------------ gnl|ti|818411116 name:POAA-aaa95f11.g1 mate_pair:818410773 (906 letters) Score E
Sequences producing significant alignments: (bits) Value gb|ABB04063.1| SacB [Shuttle/allelic-replacement vector pMQ... 172 1e-041 sp|P94468|SACB_BACST Levansucrase precursor (Beta-D-fructof... 172 1e-041 ------------ gnl|ti|818410784 name:POAA-aaa95g10.b1 mate_pair:818411126 (898 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 413 e-114 ------------ gnl|ti|818411126 name:POAA-aaa95g10.g1 mate_pair:818410784 (892 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 213 5e-054 ---------- gnl|ti|818414394 name:POAA-aaa96a04.b1 (912 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_636677.1| hypothetical protein DDB0219355 [Dictyoste... 123 8e-027 ref|ZP_00657754.1| Amine oxidase [Nocardioides sp. JS614] >... 60 1e-007 ref|YP_119289.1| putative oxidoreductase [Nocardia farcinic... 55 4e-006 ref|NP_962162.1| hypothetical protein MAP3228 [Mycobacteriu... 52 4e-005 ref|NP_856840.1| PROBABLE FLAVIN-CONTAINING MONOAMINE OXIDA... 51 5e-005 ref|NP_442072.1| amine oxidase [Synechocystis sp. PCC 6803]... 51 5e-005 ref|ZP_00770351.1| COG1231: Monoamine oxidase [Mycobacteriu... 51 5e-005 gb|AAK47598.1| amine oxidase, flavin-containing [Mycobacter... 51 5e-005 ref|YP_382202.1| Amine oxidase (flavin-containing) [Synecho... 50 8e-005 emb|CAD89351.1| monoamine oxidase A [Crassostrea gigas] 50 1e-004 >ref|XP_636677.1| hypothetical protein DDB0219355 [Dictyostelium discoideum] gb|EAL63176.1| hypothetical protein DDB0219355 [Dictyostelium discoideum] Length = 456 Score = 123 bits (309), Expect = 8e-027 Identities = 69/139 (49%), Positives = 79/139 (56%) Frame = -3
Y P MPP RDELTQR+PMG+VIKTI +Y D+PFWR Sbjct: 274 YSPSMPPRRDELTQRMPMGSVIKTITIY--------------------------DEPFWR 307
GYSAEAISD+GPIFICYDDSS HDDKK AIVGFIA Sbjct: 308 KEGYSAEAISDKGPIFICYDDSS------------------------HDDKKTAIVGFIA 343
A+AAK+WA+K EER+R + Sbjct: 344 ASAAKDWAEKSPEERKRAV 362 Score = 37.4 bits (85), Expect = 0.73 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%) Frame = -1 Query: 780 PVRRIVQERSHVRVYTDH-DVYIARFAIVALPPALAGRL 667 PVR I+Q+ + + TD+ Y +++ +VA+PP LAGR+ Sbjct: 234 PVRSIIQDANQCTIKTDNGSTYRSKYIVVAIPPTLAGRI 272 ------------------- gnl|ti|818414399 name:POAA-aaa96a10.b1 mate_pair:818414733 (894 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 ------------- gnl|ti|818414733 name:POAA-aaa96a10.g1 mate_pair:818414399 (893 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 259 7e-068 ------------ gnl|ti|818414754 name:POAA-aaa96c07.g1 mate_pair:818414419 (943 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_638511.1| hypothetical protein DDB0186078 [Dictyoste... 86 2e-015 gb|AAF53189.1| CG6388-PA [Drosophila melanogaster] >gi|1529... 83 1e-014 gb|EAL33617.1| GA19557-PA [Drosophila pseudoobscura] 81 5e-014 gb|EAA14208.3| ENSANGP00000010185 [Anopheles gambiae str. P... 80 1e-013 ref|XP_790648.1| PREDICTED: similar to Probable N(2),N(2)-d... 77 9e-013 ref|XP_685886.1| PREDICTED: similar to Probable N(2),N(2)-d... 77 9e-013 ref|NP_920982.1| putative tRNA (Guanine-N2-)-Methyltransfer... 76 2e-012 dbj|BAD43211.1| hypothetical protein [Arabidopsis thaliana]... 76 2e-012 ref|NP_197085.2| RNA binding / S-adenosylmethionine-depende... 76 2e-012 ref|NP_186881.2| RNA binding / S-adenosylmethionine-depende... 76 2e-012 >ref|XP_638511.1| hypothetical protein DDB0186078 [Dictyostelium discoideum] gb|EAL65156.1| hypothetical protein DDB0186078 [Dictyostelium discoideum] Length = 604 Score = 85.9 bits (211), Expect = 2e-015 Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 1/58 (1%) Frame = -1
GLLCVTATD AVLCGSYP CF KY SVP+ +A CHEMGLRILLH I HA +Y+ H Sbjct: 208 GLLCVTATDTAVLCGSYPEACFHKYQSVPVHRAGFCHEMGLRILLHSIEQHANRYKRH 265 Score = 61.2 bits (147), Expect = 5e-008 Identities = 28/40 (70%), Positives = 35/40 (87%), Gaps = 2/40 (5%) Frame = -2 Query: 546 SLVMMQNR--SNQFDVVDLDPYGSPTQFLDPAVQCIADGG 433 ++VMM+NR S Q+DVVD+DPYG+PTQFLD AVQ +ADGG Sbjct: 169 TMVMMENRTHSKQYDVVDVDPYGAPTQFLDSAVQAVADGG 208 ----------------- gnl|ti|818414423 name:POAA-aaa96c12.b1 mate_pair:818414759 (902 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00131788.2| COG4947: Uncharacterized protein conserv... 71 4e-011 ref|ZP_00123236.1| COG4947: Uncharacterized protein conserv... 71 4e-011 gb|AAU38730.1| unknown [Mannheimia succiniciproducens MBEL5... 68 5e-010 ref|ZP_00732731.1| hypothetical protein AsucDRAFT_0443 [Act... 65 4e-009 ref|ZP_00134461.2| COG4947: Uncharacterized protein conserv... 64 5e-009 ref|NP_721689.1| hypothetical protein SMU.1319c [Streptococ... 59 2e-007 ref|ZP_00403707.1| COG0627: Predicted esterase [Streptococc... 55 3e-006 ref|NP_104045.1| hypothetical protein mll2788 [Mesorhizobiu... 55 3e-006 ref|ZP_00333012.1| COG4947: Uncharacterized protein conserv... 54 7e-006 gb|AAM06274.1| predicted protein [Methanosarcina acetivoran... 39 0.25 >ref|ZP_00131788.2| COG4947: Uncharacterized protein conserved in bacteria [Haemophilus somnus 2336] Length = 250 Score = 71.2 bits (173), Expect = 4e-011 Identities = 29/53 (54%), Positives = 36/53 (67%) Frame = -2
G WEE+ I D+ L SKGI + W+D WGH+VDHDWPWW+ QMP L K+ Sbjct: 193 GAWEEQHIADTKRLEEAFRSKGI-EGWFDYWGHDVDHDWPWWRVQMPFFLSKL 244 -------------- gnl|ti|818414766 name:POAA-aaa96d08.g1 mate_pair:818414431 (914 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 74 5e-012 pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 70 1e-010 gb|AAR02632.1| conserved hypothetical protein [Salmonella t... 48 5e-004 sp|P03845|YPA1_ECOLI Hypothetical protein 1 46 0.002 ref|NP_995570.1| hypothetical protein pPCP04 [Yersinia pest... 45 0.003 ref|XP_731684.1| hypothetical protein PC403386.00.0 [Plasmo... 45 0.003 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 45 0.004 gb|AAB59125.1| 13.8 kd ORF [Plasmid ColE1] >gi|9507258|ref|... 45 0.004 gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 42 0.030 ref|YP_355421.1| hypothetical protein pCollet_06 [Escherich... 41 0.051 >sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein Length = 84
Identities = 37/47 (78%), Positives = 39/47 (82%) Frame = -1
+HE VQP R ALSGNYR ESN VRH+LSPLAAAT NR SRARYVGG Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGG 47 Score = 37.0 bits (84), Expect = 0.96 Identities = 16/19 (84%), Positives = 17/19 (89%) Frame = -2 Query: 523 RRTKFGICALLKPKTFGKK 467 RRT FGICALLKP TFGK+ Sbjct: 62 RRTVFGICALLKPVTFGKR 80 -------------- gnl|ti|818414774 name:POAA-aaa96e07.g1 mate_pair:818414440 (856 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAB62039.1| putative protein [Arabidopsis thaliana] 55 4e-006 ref|NP_190232.2| iron ion binding / isopenicillin-N synthas... 55 4e-006 ref|ZP_00111869.1| COG3491: Isopenicillin N synthase and re... 54 5e-006 ref|ZP_00814692.1| 2OG-Fe(II) oxygenase superfamily [Shewan... 54 7e-006 emb|CAB62320.1| putative protein [Arabidopsis thaliana] 54 9e-006 emb|CAB62300.1| flavonol synthase-like protein [Arabidopsis... 53 2e-005 gb|AAX79969.1| iron/ascorbate oxidoreductase family protein... 53 2e-005 ref|NP_566930.1| iron ion binding / isopenicillin-N synthas... 53 2e-005 gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis ... 53 2e-005 ref|ZP_00832337.1| COG3491: Isopenicillin N synthase and re... 52 2e-005 >emb|CAB62039.1| putative protein [Arabidopsis thaliana] Length = 297
Identities = 22/36 (61%), Positives = 32/36 (88%) Frame = +3
GFFYVT+HG+SEEL+ + E S++FFALP+EEK+++ Sbjct: 42 GFFYVTNHGISEELKDEAFEQSKKFFALPLEEKMKV 77 ------------------- gnl|ti|818414775 name:POAA-aaa96e08.g1 mate_pair:818414441 (892 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_999817.1| kinesin II 95 kDa [Strongylocentrotus purp... 326 8e-088 ref|XP_792044.1| PREDICTED: similar to Kinesin-like protein... 326 8e-088 ref|NP_001007567.1| kinesin family member 3B [Ciona intesti... 325 1e-087 ref|NP_032470.2| kinesin family member 3B [Mus musculus] >g... 320 3e-086 dbj|BAC65540.1| mKIAA0359 protein [Mus musculus] 320 4e-086 ref|NP_004789.1| kinesin family member 3B [Homo sapiens] >g... 320 4e-086 dbj|BAE27933.1| unnamed protein product [Mus musculus] >gi|... 320 4e-086 dbj|BAE28411.1| unnamed protein product [Mus musculus] 320 4e-086 dbj|BAA20815.2| KIAA0359 [Homo sapiens] 320 4e-086 ref|XP_585173.2| PREDICTED: similar to Kinesin-like protein... 320 5e-086 >ref|NP_999817.1| kinesin II 95 kDa [Strongylocentrotus purpuratus] sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit (KRP-85/95 95 kDa subunit) gb|AAA87393.1| SPKINESIN-II (KRP85/95) - 95kD subunit Length = 742
Identities = 175/268 (65%), Positives = 204/268 (76%), Gaps = 3/268 (1%) Frame = +3
GLVEV P +P K FTFDTVYDWNS Q +YD T +VESVL G+NGTIFAYGQT Sbjct: 38 GLVEVTNPKGPPGEPNKSFTFDTVYDWNSKQIDLYDETFRSLVESVLQGFNGTIFAYGQT 97
GTGKT TM GV NPELRG+ PN+FEHIF+ IA Q +++LVRASYLEIY EEIRDLL+K Sbjct: 98 GTGKTFTMEGVRSNPELRGVIPNSFEHIFTHIARTQNQQFLVRASYLEIYQEEIRDLLAK 157
+Q K L LKE PD GV+VKDLS FV K +EI+ +M G NR VG+T+MN SSRSH+I Sbjct: 158 DQKKRLDLKERPDTGVYVKDLSSFVTKSVKEIEHVMTVGNNNRSVGSTNMNEHSSRSHAI 217
F ITIE S G DG+ I+ GKL+LVDLAGSERQ+KTGATG RL E INLSLSALGNV Sbjct: 218 FIITIECSELGVDGENHIRVGKLNLVDLAGSERQAKTGATGDRLKEATKINLSLSALGNV 277
ISALVDGK+ HI +++ +R+ DSLG Sbjct: 278 ISALVDGKSSHIPYRDSKLTRLLQDSLG 305 ------------------- gnl|ti|818414459 name:POAA-aaa96g04.b1 mate_pair:818414791 (902 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 465 e-129 ----------- nl|ti|818414791 name:POAA-aaa96g04.g1 mate_pair:818414459 (892 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 258 1e-067 ref|NP_758764.1| hypothetical protein pEA28_01 [Erwinia amy... 241 2e-062 ---------- gnl|ti|818413452 name:POAA-aaa97a09.g1 mate_pair:820217324 (930 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_659303.1| hypothetical protein AN1699.2 [Aspergillus... 73 1e-011 gb|EAL89939.1| acyl-CoA dehydrogenase, putative [Aspergillu... 72 2e-011 gb|EAA75144.1| hypothetical protein FG10790.1 [Gibberella z... 69 3e-010 gb|AAK63186.1| probable acyl-CoA dehydrogenase [Glomus intr... 67 9e-010 ref|XP_663432.1| hypothetical protein AN5828.2 [Aspergillus... 67 9e-010 gb|EAL91193.1| cytochrome b5, putative [Aspergillus fumigat... 65 3e-009 gb|EAL93069.1| cytochrome b5, putative [Aspergillus fumigat... 65 3e-009 ref|XP_360875.1| hypothetical protein MG03418.4 [Magnaporth... 65 3e-009 ref|XP_331063.1| hypothetical protein [Neurospora crassa] >... 64 6e-009 ref|XP_328978.1| hypothetical protein [Neurospora crassa] >... 62 2e-008 >ref|XP_659303.1| hypothetical protein AN1699.2 [Aspergillus nidulans FGSC A4] gb|EAA64819.1| hypothetical protein AN1699.2 [Aspergillus nidulans FGSC A4] Length = 564
Identities = 40/111 (36%), Positives = 57/111 (51%) Frame = +2
T S ++V K+NK WI+VD Y++TKF EHP Sbjct: 4 TFSKEDVAKNNKPDSLWIIVDEDVYDLTKFQDEHPAPR---------------------- 41
+GGKK+L RVAGKDA+++F K+HN E +++KY QL +GS+ Sbjct: 42 ----------IGGKKILTRVAGKDASKQFWKYHN-EGILKKYKSQLQIGSL 81 ----------- gnl|ti|820217345 name:POAA-aaa97c09.b1 mate_pair:818413476 (900 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 489 e-137 gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 469 e-131 ---------- gnl|ti|818413476 name:POAA-aaa97c09.g1 mate_pair:820217345 (908 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 249 7e-065 gb|AAR02632.1| conserved hypothetical protein [Salmonella t... 225 2e-057 ------------ gnl|ti|820217352 name:POAA-aaa97d04.b1 mate_pair:818413483 (860 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAH66694.1| Ubiquitin specific protease 5 [Danio rerio] 73 1e-011 ref|NP_999920.2| ubiquitin specific protease 5 [Danio rerio... 73 1e-011 emb|CAA62690.1| de-ubiquitinase [Homo sapiens] 72 2e-011 gb|AAH04889.1| Ubiquitin isopeptidase T [Homo sapiens] >gi|... 72 3e-011 gb|AAH05139.1| USP5 protein [Homo sapiens] >gi|1732412|gb|A... 72 3e-011 ref|NP_003472.1| Ubiquitin isopeptidase T [Homo sapiens] >g... 72 3e-011 ref|XP_543845.2| PREDICTED: similar to Ubiquitin carboxyl-t... 72 3e-011 ref|XP_867414.1| PREDICTED: similar to Ubiquitin isopeptida... 72 3e-011 ref|XP_867393.1| PREDICTED: similar to Ubiquitin isopeptida... 72 3e-011 gb|AAP36190.1| Homo sapiens ubiquitin specific protease 5 (... 72 3e-011 >gb|AAH66694.1| Ubiquitin specific protease 5 [Danio rerio] Length = 834 Score = 73.2 bits (178), Expect = 1e-011 Identities = 37/92 (40%), Positives = 49/92 (53%) Frame = +2
++ I +L +R+P +++KDEC +SF +P ESEGGLYVC Sbjct: 4 VSEILMSVLSAIRVPRPGDRVHKDECAFSFSSP------------------ESEGGLYVC 45
MN FLGF KYVD H+ KT + YL I K Sbjct: 46 MNSFLGFGSKYVDRHHAKTGQRAYLHITRTRK 77 ------------ gnl|ti|818413486 name:POAA-aaa97d08.g1 mate_pair:820217355 (894 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAC15596.1| acid alpha-glucosidase [Coturnix japonica] ... 56 2e-006 ref|ZP_00600428.1| Alpha-glucosidase [Rubrobacter xylanophi... 55 3e-006 emb|CAH92351.1| hypothetical protein [Pongo pygmaeus] 55 4e-006 gb|AAH40431.1| GAA protein [Homo sapiens] 55 4e-006 pir||A32609 alpha-glucosidase (EC 3.2.1.20) precursor, lyso... 55 4e-006 ref|NP_000143.1| acid alpha-glucosidase preproprotein [Homo... 55 4e-006 ref|XP_511723.1| PREDICTED: acid alpha-glucosidase [Pan tro... 55 4e-006 emb|CAA68764.1| 70 kD alpha-glucosidase [Homo sapiens] 55 4e-006 ref|XP_672587.1| hypothetical protein PB108610.00.0 [Plasmo... 54 6e-006 dbj|BAE23960.1| unnamed protein product [Mus musculus] >gi|... 54 1e-005 >dbj|BAC15596.1| acid alpha-glucosidase [Coturnix japonica] dbj|BAA25890.2| acid alpha glucosidase [Coturnix japonica] Length = 873
Identities = 28/53 (52%), Positives = 32/53 (60%) Frame = -3
PQEPYAFS P Q M SA + SL PY YTL ++A G V PLF FP+ Sbjct: 619 PQEPYAFSLPAQDAMRSALRLRYSLLPYLYTLFHRAHMAGDTVARPLFLEFPK 671 ------------ PP28_Resultat gnl|ti|820217368 name:POAA-aaa97f01.b1 mate_pair:818413499 (898 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAL31950.1| CDH1-D [Gallus gallus] 52 2e-005 gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Ory... 52 4e-005 ref|XP_525925.1| PREDICTED: similar to rRNA intron-encoded ... 50 1e-004 emb|CAH00948.1| unnamed protein product [Kluyveromyces lact... 42 0.022 emb|CAH00942.1| unnamed protein product [Kluyveromyces lact... 42 0.022 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.064 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.064 ref|ZP_00396973.1| hypothetical protein DgeoDRAFT_0651 [Dei... 39 0.24 gb|EAL83773.1| hypothetical protein DgeoDRAFT_1879 [Deinoco... 39 0.24 gb|AAN36071.1| hypothetical protein PF11_0493 [Plasmodium f... 37 1.2 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451 Score = 52.4 bits (124), Expect = 2e-005 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 3/87 (3%) Frame = -3
R PRTS+G ++ + + L+ + GG +T ++A VS V Sbjct: 363 RACSPRTSQGRDRPVIAQSRVAERHLSLKEVGRRPLGGRVTS----------KHARVSFV 412
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