Instream Flow Council Instream flow and stream ecology literature OctoberApril 104, 2016 hb



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Campbell, K.L., S. Kumar, and H.P. Johnson. 1972. Stream straightening effects on flood-runoff characteristics. Transactions of the ASAE (American Society of Agricultural Engineers) 15: 94-98.
Campbell, R.F., and B.R. Eddy. 1988. Verification of habitat utilization criteria for juvenile fall chinook in the North Fork of the Lewis River, Washington. Pages 364389 in: K. Bovee and J.R. Zuboy, editors. Proceedings of a workshop on the development and evaluation of habitat suitability criteria. U.S. Fish and Wildlife Service Biological Report 88 (11). 407 pp.
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Capone, T.A., and J.A. Kushlan. 1991. Fish community structure in dry-season stream pools. Ecology 72 (3): 983-992.
Capra, H. 1995. Amelioration des modeles predictifs d’habitat de la truite fario: Echelles d’echantillonnage - Integration des chroniques hydrologiques. Diplome de Doctorat, Universite Claude Bernard, Lyon I. 281 pp.
Capra, H., P. Breil, and Y. Souchon. 1995. A new tool to interpret magnitude and duration of fish habitat variations. Regulated Rivers: Research and Management 10: 281-289.
Capra, H., C. Sabaton, V. Gouraud, Y. Souchon, and P. Lim. 2003. A population dynamics model and habitat simulation as a tool to predict brown trout demography in natural and bypassed stream reaches. Rivers Research and Applications 19: 551-568. Doi: 10.1002/rra.729
Cardinale, B.J., E.R. Gelman, and M.A. Palmer. 2004. Net spinning caddisflies as stream ecosystem engineers: the influence of Hydropsyche on benthic substrate stability. Functional Ecology 18: 381-387,
Cardinale, B.J., M.A. Palmer, A.R. Ives, and S.S. Brooks. 2005. Diversity-productivity relationships in streams vary as a function of the natural disturbance regime. Ecology 86: 716-726.
Cardinale, B.J., M.A. Palmer, C.M. Swan, S. Brooks, and N.L. Poff. 2002. The influence of substrate heterogeneity on biofilm metabolism in a stream ecosystem. Ecology 83 (2): 412-422.
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Carline, R.F. 1980. Features of successful spawning site development for brook trout in Wisconsin ponds. Transactions of the American Fisheries Society 109: 453-457.
Carline, R.F. 2006. Regulation of an unexploited brown trout population in Spruce Creek, Pennsylvania. Transactions of the American Fisheries Society 135 (4): 943-954.
Carline, R.F., and B.J. McCullough. 2003. Effects of floods on brook trout populations in the Monongahela National Forest, West Virginia. Transactions of the American Fisheries Society 132 (5): 1014-1020.
Carling, P.A. 1987. Bed stability in gravel streams, with reference to stream regulation and ecology. Pp. 321-347 in: K.S. Richards (ed), River channels: environment and process. Basil Blackwell, Oxford, U.K.
Carling, P. 1988. The concept of dominant discharge applied to two gravel-bed streams in relation to channel stability thresholds. Earth Surface Processes and Landforms 13: 355-367.
Carling, P. 1995. Implications of sediment transport for instream flow modeling of aquatic habitat. Pp. 17-31 in: D.M. Harper and A.J.D. Ferguson, editors, The Ecological Basis for River Management. Wiley. Chichester, New York. 614 pp.

Carling, P.A., and C.P. McMahon. 1987. Natural siltation of brown trout (Salmo trutta) spawning gravels during low-flow conditions. Pp. 229-244 in: J.F. Craig and B.J. Kemper, editors. Regulated streams: advances in ecology. Plenum Press, New York.


Carlisle, D.M., J. Falcone, D.M. Wolock, M.R. Meador, and R.H. Norris. 2010. Predicting the natural flow regime: models for assessing hydrological alteration in streams. River Research and Applications 26: 118-136. Doi: 10.1002/rra.1247.
Carlisle, D.M., D.M. Wolock, and M.R. Meador. 2011. Alteration of streamflow magnitudes and potential ecological consequences: a multiregional assessment. Frontiers in Ecology and the Environment 9 (5): 264-270. Doi:10.1890/100053
Carlsen, K.T., O.K. Berg. B. Finstad, and T.G. Heggberget. 2004. Diel periodicity and environmental influence on the smolt migration of Arctic charr, Salvelinus alpinus, Atlantic salmon, Salmo salar, and brown trout, Salmo trutta, in northern Norway. Environ. Biol. Fishes 70 (4): 405-413. Doi: 10.1023/B:EBFI.0000035438.8585321.fa
Carlson, A.J., and F.J. Rahel. 2010. Annual intrabasin movement and mortality of adult Bonneville cutthroat trout among complementary riverine habitats. Transactions of the American Fisheries Society 139 (5): 1360-1371.
Carlson, S.M., and B.H. Letcher. 2003. Variation in brook and brown trout survival within and among seasons, species, and age classes. J. Fish Biol. 63: 780-794. Doi:10.1046/j.1095-8649.2003.00191.x.
Carlson, S.M., and T.P. Quinn. 2007. Ten years of varying lake level and selection on size-at-maturity in sockeye salmon. Ecology 88 (10): 2620-2629.
Carlston, C.W. 1965. The relation of free meander geometry to stream discharge and its geomorphic implications. American Journal of Science 263: 864-885.
Carmack, E.C., C.B.J. Gray, C.H. Pharo, and R.J. Daley. 1979. Importance of lake-river interaction on seasonal patterns in the general circulation of Kamloops Lake, British Columbia. Limnol. Oceanography 24 (4): 634-644. Doi: 10.4319/lo.1979.24.4.0634.
Carpenter, S.R., S,G, Fisher, N.B. Grimm, and J.F. Kitchell. 1992. Global change and freshwater ecosystems. Annual Review of Ecology and Systematics 23: 119-139.
Carstens, T. 1966. Experiments with supercooling and ice formation in flowing water. Geofysiske Publikasjoner 26: 3-18.
Carter, J.G., R.A. Valdez, R.J. Ryel, and V.A. Lamarra. 1985. Fisheries habitat dynamics in the upper Colorado River. J. of Freshwater Ecol. 3: 249-264.
Carter, R.W., and I.E. Anderson. 1963. Accuracy of current meter measurements. Journal of the Hydraulics Division, American Society of Civil Engineers 89 (HY4): 105-115.
Caruso, B.S. 2001. Regional river flow, water quality, aquatic ecological impacts and recovery from drought. Hydrological Sciences Journal 46: 677-699.
Carvajal-Escobar, Y. 2008. Environmental flow regime in the framework of integrated water resource management strategy. Ecohydrology 8: 307-315.
Casado, C., D. Garcia de Jalon, C.M. Delolmo, E. Barcelo, and F. Menes. 1989. The effect of an irrigation and hydroelectric reservoir on its downstream communities. Regulated Rivers: Research and Management 4: 275-284.
Case, R.A., and G.M. MacDonald. 2003. Tree ring reconstructions of streamflow for three Canadian prairie rivers. Journal of the American Water Resources Association 39: 703-716.
Casillas, E. 1999. Role of the Columbia River estuary and plume in salmon productivity. Pages 55-64 in: G.A. Bisbal, editor. Ocean Conditions and the Management of Columbia River Salmon: Proceedings of a Symposium, Portland, Oregon, 1 July 1999. Northwest Power Planning Council, Portland, Ore.
Casper, A.F., B. Dixon, J. Earls, and J.A. Gore. 2011. Linking a spatially explicit watershed model (SWAT) with an in-stream fish habitat model (PHABSIM): a case study of setting minimum flows and levels in a low gradient, sub-tropical river. River Research and Applications 27 (3): 269-282. Doi:10.1002/rra.1355
Cassinelli, J.D., and C.M. Moffitt. 2009. Comparison of growth and stress in resident redband trout held in laboratory simulations of montane and desert summer temperature cycles. Transactions of the American Fisheries Society 139 (2): 339-352. Doi:10.1577/T08-247.1
Castella, F., M. Bickerton, P. Armitage, and G. Petts. 1995. The effects of water abstractions on invertebrate communities in UK streams. Hydrobiologia 308: 167-182.
Castelli, R.M., J.C. Chambers, and R.J. Tausch. 2000. Soil-plant relations along a soil-water gradient in Great Basin riparian meadows. Wetlands 20: 251-266.
Casterlin, M.E., and W.W. Reynolds. 1978. Habitat selection by bluegill sunfish, Lepomis macrochirus. Hydrobiologia 59: 75-79.
Castillo, M.M., J.D. Allan, and S. Brunzell. 2000. Nutrient concentrations and discharges in a midwestern agricultural catchment. J. Environ. Qual. 29 (4): 1142-1151.
Castleberry, D.T., J.J. Cech, Jr., D.C. Erman, D.H. Hankin, M. Healy, G.M. Kondolf, M. Mangel, M. Mohr, P.B. Moyle, J. Nielsen, T.P. Speed, and J.G. Williams. 1996. Uncertainty and instream flow standards. Fisheries 21 (8): 20-21.
Castro, J.M., and P.L. Jackson. 2001. Bankfull discharge recurrence intervals and regional hydraulic geometry relationships: patterns in the Pacific Northwest, USA. Journal of the American Water Resources Association 37: 1249-1262.
Castro-Santos, T. 2004. Quantifying the combined effects of attempt rate and swimming capacity on passage through velocity barriers. Canadian Journal of Fisheries and Aquatic Sciences 61: 1602-1615.
Castro-Santos, T. 2005. Optimal swim speeds for traversing velocity barriers: an analysis of volitional high-speed swimming behavior of migratory fishes. Journal of Experimental Biology 208: 421-432. Doi: 10.1242/jeb.01380.
Castro-Santos, T. 2006. Modeling the effect of varying swim speeds on fish passage through velocity barriers. Transactions of the American Fisheries Society 135: 1230-1237.
Castro-Santos, T., F.J. Sanz-Ronda, and J. Ruiz-Legazpi. 2013. Breaking the speed limit – comparative sprinting performance of brook trout (Salvelinus fontinalis) and brown trout (Salmo trutta). Canadian Journal of Fisheries and Aquatic Sciences 70 (2): 280-293. Doi: 10.1139/cjfas-2012-0186.
Catalano, M.J., M.S. Allen, and D.J. Murie. 2006. Effects of variable flows on water chemistry gradients and fish communities at the Hillsborough River, Florida. North American Journal of Fisheries Management 26 (1): 108-118.
Cattaneo, F., G. Carrel, N. Lamouroux, and P. Breil. 2001. Relationship between hydrology and cyprinid reproductive success in the lower Rhone at Montelimar, France. Arch. Hydrobiol. 151: 427-450.
Cattaneo, F., N. Lamouroux, P. Breil, and H. Capra. 2002. The influence of hydrological and biotic processes on brown trout (Salmo trutta) population dynamics. Canadian Journal of Fisheries and Aquatic Sciences 59 (1): 12-22. Doi: 10.1139/101-186
Cavendish, M.G., and M.I. Duncan. 1986. Use of the Instream Flow Incremental Methodology: a tool for negotiation. Environmental Impact Assessment Review 6: 347-363.
Cayan, D.R., T. Das, D.W. Pierce, T.P. Barnett, M. Tyree, and A. Gershunov. 2009. Future dryness in the southwest US and the hydrology of the early 21st century drought. Proceedings of the National Academy of Sciences of the USA 107: 21271-21276.
Cayan, D.R., and D.H. Peterson. 1989. The influence of North Pacific atmospheric circulation on streamflow in the West. Geophysical Monograph 55: 375-397.
Cayan, D.R., K.T. Redmond, and L.G. Riddle. 1999. ENSO and hydrological extremes in the western United States. J. Clim. 12: 2881-2893.
Cayan, D.R., L.G. Riddle, and E. Aquado. 1993. The influence of precipitation and temperature on seasonal streamflow in California. Water Resources Research 29: 1127-1140.
Cayan, D.R., and R.H. Webb. 1992. El Nino/Southern Oscillation and streamflow in the western United States. Pp. 29-68 in: H.F. Diaz and V. Markgraf. El Nino: Historical and Paleoclimatic Aspects of the Southern Oscillation. Cambridge University Press, New York.
Cazaubon, A., and J. Giudicelli. 1999. Impact of the residual flow on the physical characteristics and benthic community (algae, invertebrates) of a regulated Mediterranean river: the Durance, France. Regulated Rivers: Research & Management 15: 441—461. Doi: 10.1002/(SICI)1099-1646(199909/10)15:5<441::AID-RRR558>3.3.CO;2-9.
Cedergren, H.R. 1989. Seepage, drainage, and flow nets. John Wiley & Sons, New York.
Cederholm, C.J., R.E. Bilby, P.A. Bisson, T.W. Bumstead, B.R. Fransen, W.J. Scarlett, and J.W. Ward. 1997. Response of juvenile coho salmon and steelhead to placement of large woody debris in a coastal Washington stream. North American Journal of Fisheries Management 17 (4): 947-963.
Cereghino, R., and P. Lavandier. 1998. Influence of hypolimnetic hydropeaking on the distribution and population dynamics of Ephemeroptera in a mountain stream. Freshw. Biol. 40: 385-399. Doi: 10.1046/j.1365-2427.1998.00353.x.
Cerny, J., G.H. Copp, V. Kovac. et al. 2003. Initial impact of the Gabcikovo hydroelectric scheme on the species richness and composition of fish assemblages in the Slovak flood plain, River Danube. River Res. Appl. 19: 749-766.
Chadwick, M.A., and A.D. Huryn. 2005. Response of stream macroinvertebrate production to atmospheric nitrogen deposition and channel drying. Limnology and Oceanography 50 (1): 228-236.
Chadwick, M.A. , and A.D. Huryn. 2007. Role of habitat in determining macroinvertebrate production in an intermittent-stream system. Freshw. Biol. 52 (2): 240-251.
Chagnaud, B.P., H. Bleckmann, and M.H. Hoffmann. 2008. Lateral line nerve fibers do not code bulk water flow direction in turbulent flow. Zoology 111: 204-217.
Chagnaud, B.P., C. Brucker, M.H. Hofmann, and H. Bleckmann. 2008. Measuring flow velocity and flow direction by spatial and temporal analysis of flow fluctuations. Journal of Neuroscience 28: 4479-4487.
Chalupnicki, M.A., J.H. Johnson, J.E. McKenna, Jr., and D.A. Dittman. 2010. Habitat selection and spawning success of walleyes in a tributary to Owasco Lake, New York. North American Journal of Fisheries Management 30 (1): 170-178. Doi:10.1577/M09-033.1
Chambers, P.A., E.E. Prepas, H.R. Hamilton, and M.L. Bothwell. 1991. Current velocity and its effect on aquatic macrophytes in flowing waters. Ecological Applications 1 (3): 249-257.
Champion, P.D., and C.C. Tanner. 2001. Seasonality of macrophytes and interaction with flow in a New Zealand lowland stream. Hydrobiologia 441: 1-12.
Chan, M.D., E.D. Dibble, and K.J. Kilgore. 1997. A laboratory examination of water velocity and substrate preference by age-0 Gulf sturgeons. Transactions of the American Fisheries Society 126: 330-333.
Chan, T.U., and D.P. Hamilton. 2001. The effect of freshwater flow on the succession and biomass of phytoplankton in a seasonal estuary. Marine and Freshwater Research 52: 869-884.
Chan, T.U., D.P. Hamilton, B.J. Robson, B.R. Hodges, and C. Dallimore. 2002. Impacts of hydrological changes on phytoplankton succession in the Swan River, Western Australia. Estuaries 25 (6B): 1406-1415.
Chan, T.U., B.T. Hart, M.J. Kennard, B.J. Pusey, W. Shenton, M.M. Douglas, E. Valentinec, and S. Patel. 2010. Bayesian network models for environmental flow decision making in the Daly River, Northern Territory, Australia. River Research and Applications 28: 283-301. doi: 10.1002/rra.1456.
Chanton, J., and F.G. Lewis. 1999. Plankton and dissolved inorganic carbon isotopic composition in a river-dominated estuary: Apalachicola Bay, Florida. Estuaries 22: 575-583.
Chanton, J., and F.G. Lewis. 2002. Examination of coupling between primary and secondary production in a river-dominated estuary: Apalachicola Bay, Florida, U.S.A. Limnology and Oceanography 47(3): 683-697.
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Chapin, D.M., R.L. Beschta, and H.W. Shen. 2002. Relationship between flood frequencies and riparian plant communities in the upper Klamath Basin, Oregon. Journal of the American Water Resources Association 38: 603-617.
Chapman, D.W. 1966. Food and space as regulators of salmonid populations in streams. American Naturalist 100 (913): 345-357. Doi: 10.1086/282427.
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Chapman, D.W., and E. Knudsen. 1980. Channelization and livestock impacts on salmonid habitat and biomass in western Washington. Transactions of the American Fisheries Society 109 (4): 357-363.
Chapman, D.W., and K.P. McLeod. Development of criteria for fine sediment in the Northern Rockies Ecoregion. Don Chapman Consultants, Work Assignment 2-73, Final Report, Boise, Idaho.

Chapman, D.W., D.E. Weitkamp, T.L. Welsh, M.B. Bell, and T.H. Schadt. 1986. Effects of river flow on the distribution of Chinook salmon (Oncorhynchus tshawytscha) redds. Transactions of the American Fisheries Society 115: 537547.


Chapman, L.J., and D.L. Kramer. 1991. The consequences of flooding for the dispersal and fate of a poeciliid fish in an intermittent tropical stream. Oecologia 87: 299-306.
Chapman, R.J., T.M. Hinckley, L.C. Lee, and R.O. Teskey. 1982. Impact of water level changes on woody riparian and wetland communities. Vol. 10. U.S. Fish and Wildlife Service. OBS-82/83. Kearneysville, WV.
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Charlton, R. 2008. Fundamentals of fluvial geomorphology. Routledge, London & New York.
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Chase, J.M. 2007. Drought mediates the importance of stochastic community assembly. Proceedings of the National Academy of Sciences USA 104: 17430-17434.
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Cheslak, E.F., and A.S. Jacobson. 1990. Integrating the Instream Flow Incremental Methodology with a population response model. Rivers 1 (4): 264-288.
Chessman, B.C. 2013. Identifying species at risk from climate change: traits predict the drought vulnerability of freshwater fishes. Biological Conservation 160: 40-49.
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