Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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| gb|AAL31950.1| CDH1-D [Gallus gallus] 50 6e-005
ref|XP_453852.1| unnamed protein product [Kluyveromyces lac... 42 0.010 ref|XP_453846.1| unnamed protein product [Kluyveromyces lac... 42 0.010 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.029 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.029 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 39 0.085 ref|ZP_00396973.1| hypothetical protein DgeoDRAFT_0651 [Dei... 39 0.11 ref|ZP_00395909.1| hypothetical protein DgeoDRAFT_1879 [Dei... 39 0.11 gb|AAT97411.1| AC1147 [Rattus norvegicus] 35 2.1 ref|XP_577968.1| PREDICTED: similar to Ac1147 [Rattus norve... 35 2.1 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451 Score = 49.7 bits (117), Expect = 6e-005 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = -3
++A VS VIGINQTN+STN ERPCTTT+ IE LS Sbjct: 405 KHARVSFVIGINQTNRSTNKERPCTTTHGIEKELS 439
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -1
+RAGT+ST+ D LL IPR IIA P G PR +GT S C+ Sbjct: 308 QRAGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSP 367
R +Q G D PVI ------------ gnl|ti|818417890 name:POAA-aaa52n15.g1 mate_pair:820219077 (824 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 62 3e-008 gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 50 7e-005 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 9e-005 ref|XP_453836.1| unnamed protein product [Kluyveromyces lac... 41 0.055 gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 37 0.80 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 1.8 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 3.0 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 3.0 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 34 6.8 gb|EAA16548.1| hypothetical protein [Plasmodium yoelii yoelii] 34 6.8 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102 Score = 61.6 bits (148), Expect = 3e-008 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -1
++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 Score = 34.3 bits (77), Expect = 5.2 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -3 Query: 639 ACHVRSRKTTSYA*VGRSQEKSWWKVV 559 + VR+RK +YA GRSQ K WW+ V Sbjct: 43 SARVRTRKMVNYAWAGRSQRKLWWRSV 69 ------------ gnl|ti|818417697 name:POAA-aaa53b10.b1 mate_pair:820218878 (898 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_525925.1| PREDICTED: similar to rRNA intron-encoded ... 59 2e-007 ref|XP_523367.1| PREDICTED: similar to rRNA intron-encoded ... 57 9e-007 gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Ory... 56 2e-006 gb|AAL31950.1| CDH1-D [Gallus gallus] 50 1e-004 ref|XP_453852.1| unnamed protein product [Kluyveromyces lac... 42 0.022 ref|XP_453846.1| unnamed protein product [Kluyveromyces lac... 42 0.022 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.064 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.064 ref|ZP_00396973.1| hypothetical protein DgeoDRAFT_0651 [Dei... 39 0.24 ref|ZP_00395909.1| hypothetical protein DgeoDRAFT_1879 [Dei... 39 0.24 >ref|XP_525925.1| PREDICTED: similar to rRNA intron-encoded homing endonuclease [Pan troglodytes] Length = 128
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 6/81 (7%) Frame = +2
+A A K + ++QERKL VR+RSDTVVI TINDA+ V P LG + S Sbjct: 44 RAKAFAKNVFINQERKLEVRRRSDTVVIPTINDADWRCGGVIPMTRWAASKKPVLGFLGS 103
GSMVA+LKLKGID RA Sbjct: 104 ----KGSMVAKLKLKGIDRRA 120 --------------- gnl|ti|818417700 name:POAA-aaa53b16.b1 mate_pair:820218881 (513 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_395007.2| PREDICTED: similar to hect (homologous to ... 67 2e-010 ref|XP_698091.1| PREDICTED: similar to hect (homologous to ... 64 2e-009 ref|XP_637470.1| hypothetical protein DDB0187197 [Dictyoste... 64 3e-009 ref|XP_413753.1| PREDICTED: similar to guanine nucleotide e... 64 3e-009 ref|XP_236362.3| PREDICTED: similar to potential ubiquitin ... 64 3e-009 ref|NP_003913.2| guanine nucleotide exchange factor p532 [H... 63 4e-009 ref|XP_358383.2| hect (homologous to the E6-AP (UBE3A) carb... 63 4e-009 ref|XP_618229.2| PREDICTED: similar to guanine nucleotide e... 63 4e-009 ref|XP_686789.1| PREDICTED: similar to Herc2 protein [Danio... 63 4e-009 ref|XP_620756.1| PREDICTED: hect (homologous to the E6-AP (... 63 4e-009 >ref|XP_395007.2| PREDICTED: similar to hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2, partial [Apis mellifera] Length = 3746 Score = 67.4 bits (163), Expect = 2e-010 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Frame = +3
PH K+ F GE+V+ GG Y + ++ ELQ G LPLL+P PN + NRD ++ Sbjct: 3357 PHRIWKVKFIGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDNGTNRDCFLLN 3416
P DS LH+ M+ FLG LMG+ Sbjct: 3417 PIADSPLHMNMFRFLGILMGI 3437 ------------ gnl|ti|820218881 name:POAA-aaa53b16.g1 mate_pair:818417700 (946 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_698091.1| PREDICTED: similar to hect (homologous to ... 63 2e-008 ref|XP_413753.1| PREDICTED: similar to guanine nucleotide e... 62 3e-008 ref|XP_236362.3| PREDICTED: similar to potential ubiquitin ... 62 3e-008 gb|AAH40929.1| HERC1 protein [Homo sapiens] 62 4e-008 gb|AAD12586.1| p532 [Homo sapiens] 62 4e-008 ref|NP_003913.2| guanine nucleotide exchange factor p532 [H... 62 4e-008 ref|XP_358383.2| hect (homologous to the E6-AP (UBE3A) carb... 62 4e-008 ref|XP_618229.2| PREDICTED: similar to guanine nucleotide e... 62 4e-008 ref|XP_544717.2| PREDICTED: similar to guanine nucleotide e... 62 4e-008 ref|XP_620756.1| PREDICTED: hect (homologous to the E6-AP (... 62 4e-008 >ref|XP_698091.1| PREDICTED: similar to hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 [Danio rerio] Length = 4239 Score = 62.8 bits (151), Expect = 2e-008 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Frame = -2
P + K+ GE + GG + T++ +EL+ GV+ LL+P PNA A+V +NRD+++ Sbjct: 3886 PSRAWKVKLVGEGADDAGGVFDDTITEMCQELETGVVDLLIPSPNAAAEVGYNRDRFLLN 3945
PS HL ++FLG LMG+ KK Sbjct: 3946 PSACLEEHLLQFKFLGILMGVAIRTKK 3972 ---------- gnl|ti|818417701 name:POAA-aaa53b18.b1 mate_pair:820218882 (908 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL31950.1| CDH1-D [Gallus gallus] 83 1e-014 ref|XP_428325.1| PREDICTED: similar to Ac1147, partial [Gal... 63 2e-008 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 57 7e-007 ref|XP_520857.1| PREDICTED: hypothetical protein XP_520857 ... 57 7e-007 ref|XP_358030.2| PREDICTED: similar to Ac1147 [Mus musculus] 57 1e-006 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 43 0.013 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 43 0.013 ref|XP_578905.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.065 ref|XP_578906.1| PREDICTED: similar to Ac1147 [Rattus norve... 39 0.19 ref|XP_578847.1| PREDICTED: similar to Ac1147 [Rattus norve... 39 0.19 >gb|AAL31950.1| CDH1-D [Gallus gallus] Length = 451 Score = 82.8 bits (203), Expect = 1e-014 Identities = 61/132 (46%), Positives = 70/132 (53%), Gaps = 1/132 (0%) Frame = -3
NDP+A SPT TLLRLLLPL V + + V P L +PIGSSDGRCVQR Sbjct: 250 NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309
AGT+ST+ D LL IPR IIA P G PR +GT S C+ R Sbjct: 310 AGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSPRT 369
+Q G D PVI Sbjct: 370 SQ---GRDRPVI 378
Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = -2
++A VS VIGINQTN+STN ERPCTTT+ IE LS Sbjct: 405 KHARVSFVIGINQTNRSTNKERPCTTTHGIEKELS 439 ------------- gnl|ti|820218882 name:POAA-aaa53b18.g1 mate_pair:818417701 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 62 3e-008 gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 50 8e-005 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 1e-004 ref|XP_453836.1| unnamed protein product [Kluyveromyces lac... 41 0.063 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.24 gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 37 0.70 ref|YP_056023.1| exodeoxyribonuclease V beta chain [Propion... 37 0.92 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 2.0 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 3.5 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 35 3.5 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102 Score = 61.6 bits (148), Expect = 3e-008 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -3
++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 Score = 34.3 bits (77), Expect = 5.9 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 785 ACHVRSRKTTSYA*VGRSQEKSWWKVV 705 + VR+RK +YA GRSQ K WW+ V Sbjct: 43 SARVRTRKMVNYAWAGRSQRKLWWRSV 69 ----------- gnl|ti|818417710 name:POAA-aaa53d14.b1 (384 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_795116.1| PREDICTED: similar to dynein, axonemal, he... 63 4e-009 ref|XP_791640.1| PREDICTED: similar to dynein, axonemal, he... 63 4e-009 gb|AAA63584.1| dynein heavy chain isotype 3A 62 5e-009 ref|XP_532130.2| PREDICTED: similar to dynein, axonemal, he... 61 1e-008 gb|EAA03542.3| ENSANGP00000012927 [Anopheles gambiae str. P... 60 2e-008 ref|XP_419480.1| PREDICTED: similar to axonemal dynein heav... 60 2e-008 ref|XP_701077.1| PREDICTED: similar to dynein, axonemal, he... 60 2e-008 ref|XP_692532.1| PREDICTED: similar to dynein, axonemal, he... 60 2e-008 ref|XP_622820.1| PREDICTED: similar to axonemal dynein heav... 60 3e-008 ref|XP_228058.3| PREDICTED: similar to axonemal dynein heav... 60 3e-008 >ref|XP_795116.1| PREDICTED: similar to dynein, axonemal, heavy chain 5 [Strongylocentrotus purpuratus] Length = 2365
Identities = 25/51 (49%), Positives = 38/51 (74%) Frame = +1
+K+ Y ++ AA+E +++E LV+HPPW K I+LYE VRHG++ +GPSG Sbjct: 24 DKAGYPEIEAAIEKQIREAGLVHHPPWTLKLIQLYETQNVRHGMMTLGPSG 74 -------------- gnl|ti|818417711 name:POAA-aaa53d16.b1 mate_pair:820218891 (757 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_788695.1| PREDICTED: similar to predicted CDS, rever... 118 2e-025 tpe|CAJ00236.1| TPA: endonuclease-reverse transcriptase [Sc... 117 5e-025 ref|XP_796255.1| PREDICTED: similar to predicted CDS, rever... 109 8e-023 ref|XP_792610.1| PREDICTED: similar to predicted CDS, endon... 109 8e-023 pir||T24354 hypothetical protein T02D1.1 - Caenorhabditis e... 109 1e-022 pir||T29335 hypothetical protein F44E8.1 - Caenorhabditis e... 107 4e-022 ref|XP_793350.1| PREDICTED: similar to predicted CDS, rever... 106 7e-022 ref|XP_798836.1| PREDICTED: similar to predicted CDS, endon... 106 7e-022 pir||A89723 protein F47C8.1 [imported] - Caenorhabditis ele... 105 2e-021 pir||H88671 protein F28E10.3 [imported] - Caenorhabditis el... 105 2e-021 >ref|XP_788695.1| PREDICTED: similar to predicted CDS, reverse transcriptase family member (1O881) [Strongylocentrotus purpuratus] Length = 766
Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 5/212 (2%) Frame = -3
++ G + GPDNI IK T +E L K+ N TC+ +KIP +WK++ + ++K Sbjct: 306 QMKRGKSPGPDNILIDTIKEGGDT--ITEELAKLYNACTCMQTRKIPHQWKEATMIILHK 363
KG+ D NYRPI+L+ YK+Y+ IT RL +++NQ Q GFR+ T I T Sbjct: 364 KGDKRDLKNYRPISLLSNLYKLYTKIITNRLEKILDNNQ--PREQAGFRRGFSTMDHIHT 421
+ + E L V F+D +KA+DSVE +A+ L G +N + I+ DI C+N Sbjct: 422 INQLKEKCQEFNIPLCVAFVDYEKAFDSVETYAVLKALQDQGINNTYIKILKDIYSDCYN 481
T + + S+ I I + VRQGD SP F Sbjct: 482 T----VRMHKASNKIMIRKGVRQGDTGSPKFF 509 --------------- gnl|ti|818417728 name:POAA-aaa53h12.b1 mate_pair:820218907 (752 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_785301.1| PREDICTED: similar to polynucleotide kinas... 47 9e-004 gb|AAW41315.1| conserved hypothetical protein [Cryptococcus... 42 0.016 emb|CAG06446.1| unnamed protein product [Tetraodon nigrovir... 42 0.028 ref|XP_697947.1| PREDICTED: similar to Bifunctional polynuc... 40 0.061 gb|EAL88537.1| polynucleotide kinase-3'-phosphatase [Asperg... 40 0.10 ref|XP_328857.1| hypothetical protein [Neurospora crassa] >... 40 0.10 ref|XP_364889.1| hypothetical protein MG09734.4 [Magnaporth... 39 0.14 ref|XP_657497.1| polynucleotide kinase-3'-phosphatase, puta... 39 0.14 ref|XP_874535.1| PREDICTED: similar to polynucleotide kinas... 39 0.14 ref|XP_887726.1| PREDICTED: similar to polynucleotide kinas... 39 0.14 >ref|XP_785301.1| PREDICTED: similar to polynucleotide kinase 3-phosphatase [Strongylocentrotus purpuratus] Length = 905
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Frame = -3
+IY+ A P + + K FS+S R FA+NVGI F+TPEE+FLG++ F++ FDP Sbjct: 665 SIYVGDAAGRPADWTPKRKKDFSMSDRLFALNVGIPFKTPEEFFLGYKPAKFNMPAFDPT 724
+++
Sbjct: 725 TVS 727 --------------- nl|ti|820218907 name:POAA-aaa53h12.g1 mate_pair:818417728 (529 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAD25772.1| URACYL DNA GLYCOSYLASE [Encephalitozoon cun... 60 3e-008 ref|ZP_00532669.1| Uracil-DNA glycosylase [Chlorobium phaeo... 58 1e-007 ref|NP_299969.2| uracil-DNA glycosylase [Xylella fastidiosa... 57 4e-007 gb|AAF85489.1| uracil-DNA glycosylase [Xylella fastidiosa 9... 57 4e-007 ref|YP_270938.1| uracil-DNA glycosylase [Colwellia psychrer... 57 4e-007 ref|NP_702036.1| uracil-DNA glycosylase, putative [Plasmodi... 56 5e-007 ref|NP_873548.1| uracil-DNA glycosylase [Haemophilus ducrey... 56 5e-007 ref|ZP_00684070.1| Uracil-DNA glycosylase [Xylella fastidio... 55 1e-006 ref|YP_207912.1| putative uracil-DNA glycosylase [Neisseria... 55 1e-006 ref|ZP_00683786.1| Uracil-DNA glycosylase [Xylella fastidio... 55 1e-006 >emb|CAD25772.1| URACYL DNA GLYCOSYLASE [Encephalitozoon cuniculi GB-M1] ref|NP_586168.1| URACYL DNA GLYCOSYLASE [Encephalitozoon cuniculi GB-M1] Length = 286
Identities = 24/45 (53%), Positives = 32/45 (71%) Frame = +1
+N + H VL HPSPLS + F+GCKHFS+ N+YL HG S ++W Sbjct: 240 INRNKHLVLTCGHPSPLSSSHFFGCKHFSKANKYLMDHGKSPVEW 284 -------------- gnl|ti|818417732 name:POAA-aaa53h24.b1 mate_pair:820218910 (857 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL91497.1| ABC transporter AbcG11 [Dictyostelium discoi... 66 2e-009 ref|XP_646079.1| ABC transporter G family protein [Dictyost... 66 2e-009 ref|XP_646646.1| ABC transporter G family protein [Dictyost... 66 2e-009 ref|XP_629126.1| ABC transporter G family protein [Dictyost... 66 2e-009 gb|AAL91500.1| ABC transporter AbcG15 [Dictyostelium discoi... 65 3e-009 gb|AAL91499.1| ABC transporter AbcG14 [Dictyostelium discoi... 65 3e-009 gb|AAG49401.1| unknown [Dictyostelium discoideum] 65 3e-009 ref|XP_647273.1| ABC transporter G family protein [Dictyost... 65 3e-009 ref|XP_646070.1| ABC transporter G family protein [Dictyost... 65 3e-009 ref|XP_646647.1| ABC transporter G family protein [Dictyost... 64 5e-009 >gb|AAL91497.1| ABC transporter AbcG11 [Dictyostelium discoideum] Length = 1441 Score = 65.9 bits (159), Expect = 2e-009 Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 1/55 (1%) Frame = +3
G++LI MPQ I RE FKRD++SKFYS PFA++I+ VE+P++V +I+F+C Sbjct: 1187 GILLIFVVMPQLIIQREYFKRDFASKFYSWFPFAISIVVVELPFIVISGTIFFFC 1241 ---------- gnl|ti|820218939 name:POAA-aaa53n24.g1 mate_pair:818417756 (876 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA75417.1| hypothetical protein FG11207.1 [Gibberella z... 47 7e-004 ref|NP_989882.1| inversin [Gallus gallus] >gi|18448956|gb|A... 47 9e-004 sp|Q8UVC3|INVS_CHICK Inversin 47 9e-004 ref|XP_789983.1| PREDICTED: similar to CG7462-PC, isoform C... 47 0.001 ref|XP_783211.1| PREDICTED: similar to ankyrin 3, epithelia... 45 0.003 gb|EAN26780.1| Ankyrin [Magnetococcus sp. MC-1] >gi|6926271... 45 0.004 ref|NP_660278.2| fibronectin type III and ankyrin repeat do... 45 0.004 gb|AAQ88521.1| CG3104 hlg [Homo sapiens] 45 0.004 emb|CAG11933.1| unnamed protein product [Tetraodon nigrovir... 44 0.006 ref|XP_790010.1| PREDICTED: similar to ankyrin 3, epithelia... 44 0.006 >gb|EAA75417.1| hypothetical protein FG11207.1 [Gibberella zeae PH-1] ref|XP_391383.1| hypothetical protein FG11207.1 [Gibberella zeae PH-1] Length = 1343
Identities = 23/49 (46%), Positives = 33/49 (67%) Frame = +1
L+ GA VD D++ RTPLHY+ + G E+ +LLILN A+V + N +Q Sbjct: 1189 LLRLGATVDSRDYTYRTPLHYACQEGHHEIVQLLILNNADVNATNDLDQ 1237 ------------- gnl|ti|818423919 name:POAA-aaa54c05.g1 mate_pair:820221399 (917 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_642011.1| SWIRM domain containing protein [Dictyoste... 102 2e-020 ref|NP_001012945.1| myb-like, SWIRM and MPN domains 1 [Gall... 95 4e-018 emb|CAI12031.1| novel protein similar to human KIAA1915 [Da... 94 9e-018 ref|XP_700360.1| PREDICTED: similar to CG4751-PA, partial [... 94 9e-018 ref|XP_689723.1| PREDICTED: similar to CG4751-PA [Danio rerio] 94 9e-018 emb|CAH70737.1| novel protein [Homo sapiens] >gi|56417882|e... 92 3e-017 dbj|BAB67808.1| KIAA1915 protein [Homo sapiens] 92 3e-017 ref|XP_593335.2| PREDICTED: similar to CG4751-PA [Bos taurus] 92 3e-017 ref|XP_055481.3| PREDICTED: KIAA1915 protein [Homo sapiens] 92 3e-017 ref|XP_546688.2| PREDICTED: similar to CG4751-PA [Canis fam... 91 4e-017 >ref|XP_642011.1| SWIRM domain containing protein [Dictyostelium discoideum] gb|EAL68136.1| myb domain-containing protein [Dictyostelium discoideum] Length = 1217 Score = 102 bits (253), Expect = 2e-020 Identities = 43/78 (55%), Positives = 59/78 (75%) Frame = +1
I +TEV+G+LGG ++ DT H+ + LA+PC S SS +QC+MDP SQ+ A+E + + GL +V Sbjct: 794 ISSTEVIGMLGGKFNPDTNHITILLAIPCNSISSDIQCDMDPNSQIAAKEMVNSIGLDIV 853
GWYHSHP F P PS+R I Sbjct: 854 GWYHSHPNFEPIPSLRDI 871 ------------- gnl|ti|818423925 name:POAA-aaa54c19.g1 mate_pair:820221406 (911 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAU10782.1| putative serine protease [Oryza sativa (japo... 67 9e-010 ref|NP_566115.1| DEGP2; serine-type peptidase/ trypsin [Ara... 67 9e-010 ref|NP_568543.1| serine-type endopeptidase/ serine-type pep... 65 2e-009 emb|CAI73735.1| serine protease (zymogen-like), putative [T... 64 6e-009 ref|NP_564857.1| protein binding / serine-type endopeptidas... 64 6e-009 gb|AAB60913.1| F5I14.17 gene product [Arabidopsis thaliana] 64 6e-009 dbj|BAB08526.1| unnamed protein product [Arabidopsis thaliana] 63 1e-008 ref|NP_568583.1| serine-type endopeptidase/ serine-type pep... 63 1e-008 ref|NP_564856.1| serine-type endopeptidase/ serine-type pep... 57 7e-007 gb|AAB60923.1| F5I14.16 [Arabidopsis thaliana] 57 7e-007 >gb|AAU10782.1| putative serine protease [Oryza sativa (japonica cultivar-group)] gb|AAT77386.1| putative serine protease [Oryza sativa (japonica cultivar-group)] Length = 614 Score = 67.0 bits (162), Expect = 9e-010 Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 1/57 (1%) Frame = +1
D NS +L LQE++ V+GYP GGD+ISVTKGVVSRVE T Y+HG +L+AIQ+ Sbjct: 222 DGMNSLELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSRVEPTQYAHGATQLMAIQI 278 Yüklə 3,49 Mb. Dostları ilə paylaş:
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