Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|XP_624425.1| PREDICTED: similar to ENSANGP00000016944 [... 73 1e-011 ref|XP_779962.1| PREDICTED: similar to dimethyladenosine tr... 71 6e-011 emb|CAI76514.1| dimethyladenosine transferase, putative [Th... 69 3e-010 pir||T20417 hypothetical protein E02H1.1 - Caenorhabditis e... 67 1e-009 gb|EAN31827.1| dimethyladenosine transferase, putative [The... 65 3e-009 ref|XP_745929.1| dimethyladenosine transferase, putative [P... 65 4e-009 gb|EAA19302.1| dimethyladenosine transferase, putative [Pla... 65 4e-009 ref|XP_677650.1| dimethyladenosine transferase, putative [P... 64 6e-009 >gb|AAP52468.1| hypothetical protein LOC_Os10g10440 [Oryza sativa (japonica cultivar-group)] ref|NP_920181.1| putative dimethyladenosine transferse [Oryza sativa (japonica cultivar-group)] gb|AAM47293.1| Putative dimethyladenosine transferse [Oryza sativa (japonica cultivar-group)] gb|AAL78109.1| Putative dimethyladenosine transferse [Oryza sativa] Length = 233
Identities = 54/135 (40%), Positives = 69/135 (51%), Gaps = 11/135 (8%) Frame = +1
PL P S +EWDGLVRLCF RKNKTLGAIFKQ VL+LLE NYKT +L Sbjct: 88 PLPPVSFKEWDGLVRLCFNRKNKTLGAIFKQKRVLELLEKNYKTMQSLQLTSDAEKGEEK 147
+ L + ++ + + ++ V K+K+M IL D Sbjct: 148 MSPDDVALLSSMVDDMNMESSYENDDDDEMEMDDADM---VVESRACFKEKIMGILQQGD 204
FAEKR+SKL +FL Sbjct: 205 FAEKRASKLSQVDFL 219 -------------- gnl|ti|818418800 name:POAA-aaa64p11.g1 mate_pair:818421050 (897 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_788695.1| PREDICTED: similar to predicted CDS, rever... 107 4e-022 tpe|CAJ00236.1| TPA: endonuclease-reverse transcriptase [Sc... 100 9e-020 ref|XP_785177.1| PREDICTED: similar to endonuclease/exonucl... 98 3e-019 ref|XP_783384.1| PREDICTED: similar to predicted CDS, endon... 98 4e-019 gb|AAW25617.1| SJCHGC02887 protein [Schistosoma japonicum] 96 1e-018 gb|AAB04627.1| reverse transcriptase [Chironomus tentans] 95 3e-018 gb|AAB26437.2| reverse transcriptase homolog [Chironomus th... 94 5e-018 ref|XP_793350.1| PREDICTED: similar to predicted CDS, rever... 92 2e-017 pir||A89723 protein F47C8.1 [imported] - Caenorhabditis ele... 92 3e-017 ref|XP_782073.1| PREDICTED: similar to predicted CDS, rever... 92 3e-017 >ref|XP_788695.1| PREDICTED: similar to predicted CDS, reverse transcriptase family member (1O881) [Strongylocentrotus purpuratus] Length = 766 Score = 107 bits (268), Expect = 4e-022 Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 5/188 (2%) Frame = +2
E+ + I ++ G + GPDNI + IK T +E L K+ N TC+ +KIP +WK++ Sbjct: 299 EVQHAINQMKRGKSPGPDNILIDTIKEGGDT--ITEELAKLYNACTCMQTRKIPHQWKEA 356
+ ++KKG+ D NYRPI+L+ YK+Y+ +IT RL +++NQ Q FR+ Sbjct: 357 TMIILHKKGDKRDLKNYRPISLLSNLYKLYTKIITNRLEKILDNNQ--PREQAGFRRGFS 414
T I T+ + E L V F+D +KA+DSVE +A+ L G + I+ D Sbjct: 415 TMDHIHTINQLKEKCQEFNIPLCVAFVDYEKAFDSVETYAVLKALQDQGINNTYIKILKD 474
I C+NT
Sbjct: 475 IYSDCYNT 482 --------------- gnl|ti|820219665 name:POAA-aaa65d08.b1 mate_pair:818420726 (912 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_190357.2| ATATH1; ATPase, coupled to transmembrane m... 78 4e-013 dbj|BAB10073.1| unnamed protein product [Arabidopsis thaliana] 78 5e-013 dbj|BAB09013.1| unnamed protein product [Arabidopsis thaliana] 78 5e-013 ref|NP_200981.1| ATATH11; ATPase, coupled to transmembrane ... 78 5e-013 ref|XP_482243.1| putative ABC transporter [Oryza sativa (ja... 73 2e-011 ref|XP_652529.1| ABC transporter, putative [Entamoeba histo... 64 7e-009 ref|XP_650825.1| ABC transporter [Entamoeba histolytica HM-... 63 1e-008 ref|XP_482246.1| putative ABC transporter [Oryza sativa (ja... 60 8e-008 gb|AAM20516.1| ABC-type transport protein-like protein [Ara... 59 2e-007 ref|NP_190363.2| ATATH7; ATPase, coupled to transmembrane m... 59 2e-007 >ref|NP_190357.2| ATATH1; ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] gb|AAO63876.1| putative ABC transporter protein [Arabidopsis thaliana] gb|AAO42215.1| putative ABC transporter protein [Arabidopsis thaliana] Length = 983 Score = 78.2 bits (191), Expect = 4e-013 Identities = 46/124 (37%), Positives = 59/124 (47%) Frame = -3
++FLDEPTTGMD + +R VWD+IQ+ KKG +ILTTH+MEEA Sbjct: 685 LVFLDEPTTGMDPITRRHVWDIIQETKKGRAIILTTHSMEEA------------------ 726
+IL D+IGI+ G L+ IGTS+ LK R Sbjct: 727 ---------------------------------DILSDRIGIMAKGRLRCIGTSIRLKSR 753
F TG
Sbjct: 754 FGTG 757 ---------------------- gnl|ti|820219667 name:POAA-aaa65d12.b1 (548 letters) Score E
Sequences producing significant alignments: (bits) Value dbj|BAE43955.1| beta-glucosidase [Physarum polycephalum] 70 3e-011 gb|EAL21770.1| hypothetical protein CNBC4720 [Cryptococcus ... 50 3e-005 gb|AAW42237.1| beta-glucosidase, putative [Cryptococcus neo... 50 3e-005 gb|AAF21242.1| beta-glucosidase precursor [Coccidioides imm... 47 3e-004 ref|XP_762222.1| hypothetical protein UM06075.1 [Ustilago m... 47 4e-004 gb|EAL86858.1| beta-D-glucoside glucohydrolase [Aspergillus... 45 0.001 ref|XP_362854.1| hypothetical protein MG08583.4 [Magnaporth... 44 0.002 ref|XP_760179.1| hypothetical protein UM04032.1 [Ustilago m... 44 0.002 sp|P48825|BGL1_ASPAC Beta-glucosidase 1 precursor (Gentiobi... 44 0.002 gb|AAQ76093.1| beta-D-glucoside glucohydrolase [Trichoderma... 44 0.003 >dbj|BAE43955.1| beta-glucosidase [Physarum polycephalum] Length = 1248
Identities = 33/33 (100%), Positives = 33/33 (100%) Frame = -3
IEAVASVNNRTVVVLHVVGPVVMPWADHPNVTA Sbjct: 502 IEAVASVNNRTVVVLHVVGPVVMPWADHPNVTA 534 Score = 50.8 bits (120), Expect = 2e-005 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = -3 Query: 465 ITVEGNQGDRNNLNLFHNGNALVRI*IAAKYRDISIV 355 ITVEGN+GDRNNLNLFHNGNAL+ + R + ++ Sbjct: 480 ITVEGNEGDRNNLNLFHNGNALIEAVASVNNRTVVVL 516 ------------------ PP19_Resultat
(718 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_795541.1| PREDICTED: similar to Moloney leukemia vir... 80 8e-014 ref|XP_415982.1| PREDICTED: similar to MOV10-like 1; Mov10 ... 79 1e-013 ref|XP_794121.1| PREDICTED: similar to Potential helicase M... 79 1e-013 ref|XP_531690.2| PREDICTED: similar to MOV10-like 1 [Canis ... 77 5e-013 ref|XP_540337.2| PREDICTED: similar to Mov10, Moloney leuke... 75 3e-012 ref|NP_112550.1| Moloney leukemia virus 10-like 1 [Mus musc... 74 5e-012 dbj|BAE29375.1| unnamed protein product [Mus musculus] 74 5e-012 dbj|BAE40978.1| unnamed protein product [Mus musculus] 74 5e-012 gb|AAP60176.1| cardiac specific isoform of Mov10 like-1 [Mu... 74 5e-012 dbj|BAC39279.1| unnamed protein product [Mus musculus] 74 5e-012 >ref|XP_795541.1| PREDICTED: similar to Moloney leukemia virus 10-like 1 [Strongylocentrotus purpuratus] Length = 1637
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Frame = +3
VLAGDP QLGPV+ S A G+ GL +SLLER++ Y+RD F +G YN L+TK Sbjct: 650 VLAGDPMQLGPVLASSQA---GELGLEQSLLERMMKRDMYQRDSKTFRDHGGYNPLLVTK 706
LVNNYRSHP +L +P+Q Sbjct: 707 LVNNYRSHPALLKLPSQ 723 --------------------- gnl|ti|820219683 name:POAA-aaa65f22.b1 mate_pair:818420739 (786 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_172286.1| unknown protein [Arabidopsis thaliana] >gi... 60 8e-008 dbj|BAD67155.1| PPR986-12 [Physcomitrella patens] 59 2e-007 ref|XP_470148.1| hypothetical protein [Oryza sativa (japoni... 57 5e-007 dbj|BAD34344.1| putative pentatricopeptide (PPR) repeat-con... 57 7e-007 ref|NP_195043.1| unknown protein [Arabidopsis thaliana] >gi... 57 9e-007 ref|NP_565377.1| unknown protein [Arabidopsis thaliana] >gi... 56 1e-006 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] 56 1e-006 ref|NP_188975.2| unknown protein [Arabidopsis thaliana] 56 1e-006 dbj|BAD67154.1| PPR868-14 [Physcomitrella patens] 55 2e-006 ref|NP_199702.1| unknown protein [Arabidopsis thaliana] >gi... 55 2e-006 >ref|NP_172286.1| unknown protein [Arabidopsis thaliana] gb|AAF79838.1| T6D22.15 [Arabidopsis thaliana] Length = 741
Identities = 27/46 (58%), Positives = 33/46 (71%) Frame = -2
L HHSE LAIA+G+I T P T +TI NLR+C NCH + K SK+Y Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIY 715 Score = 38.5 bits (88), Expect = 0.26 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -1 Query: 333 YNRNITVRDAARFHHFQNGKCSCGE 259 Y R I RD RFHHF++G CSC + Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCND 739 --------------- gnl|ti|818420763 name:POAA-aaa65l18.g1 mate_pair:820219714 (446 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAA15708.1| EG:30B8.4 [Drosophila melanogaster] 63 3e-009 gb|EAL41356.1| ENSANGP00000029021 [Anopheles gambiae str. P... 63 4e-009 gb|EAA06040.3| ENSANGP00000005643 [Anopheles gambiae str. P... 63 4e-009 ref|XP_784764.1| PREDICTED: similar to pecanex-like 3, part... 61 1e-008 ref|XP_787862.1| PREDICTED: similar to Pecanex-like protein... 61 1e-008 emb|CAI22241.1| pecanex-like 2 (Drosophila) [Homo sapiens] ... 60 3e-008 emb|CAI18866.1| pecanex-like 2 (Drosophila) [Homo sapiens] ... 60 3e-008 dbj|BAA23708.2| KIAA0435 [Homo sapiens] 60 3e-008 ref|XP_525094.1| PREDICTED: similar to KIAA0435 [Pan troglo... 60 3e-008 ref|XP_226571.3| PREDICTED: similar to RIKEN cDNA E330039K1... 60 3e-008 >emb|CAA15708.1| EG:30B8.4 [Drosophila melanogaster] Length = 3345 Score = 63.2 bits (152), Expect = 3e-009 Identities = 28/45 (62%), Positives = 34/45 (75%) Frame = +2
+GR G V +GD FVL +D L +HIIEL NG CTFQ+RGLEF+G Sbjct: 2068 MGRWGNVNQGDCFVLASDDLNCLVHIIELGNGLCTFQMRGLEFRG 2112 --------------- gnl|ti|818421682 name:POAA-aaa66a09.b1 mate_pair:818423376 (903 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_421904.1| PREDICTED: similar to axonemal dynein heav... 67 8e-010 gb|EAL24531.1| CG17866-PA.3 [Drosophila melanogaster] >gi|6... 66 1e-009 gb|AAG29545.1| 1-beta dynein [Drosophila melanogaster] 66 1e-009 dbj|BAC26619.1| unnamed protein product [Mus musculus] 65 3e-009 gb|AAX33611.1| AT15593p [Drosophila melanogaster] 65 3e-009 gb|AAF53626.1| CG5526-PA [Drosophila melanogaster] >gi|1764... 65 3e-009 emb|CAI52011.1| novel protein similar to dynein [Mus muscul... 65 3e-009 ref|XP_541831.2| PREDICTED: similar to axonemal dynein heav... 65 3e-009 ref|XP_354799.3| PREDICTED: similar to dynein, axonemal, he... 65 3e-009 ref|XP_612278.2| PREDICTED: similar to dynein, axonemal, he... 65 4e-009 >ref|XP_421904.1| PREDICTED: similar to axonemal dynein heavy chain 7 [Gallus gallus] Length = 4028 Score = 67.0 bits (162), Expect = 8e-010 Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Frame = -2
+++P V+ I Q LG +F++PP L++A+ S +PL+ +L PG DP+ Sbjct: 3434 KIIPMVQEFIVQNLGRSFIEPPPFD----LSRAFSDSHSCTPLIFVLSPGA----DPMAA 3485
L + A+ + + +L +LS+GQGQGP+A + I +AV G ++ +C L S Sbjct: 3486 LVKFADDQGYSDTKLSSLSLGQGQGPIAMKMIEKAVKEGSWIVLQNCHLAS 3536 ---------------- gnl|ti|818423376 name:POAA-aaa66a09.g1 mate_pair:818421682 (899 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ09048.1| dynein heavy chain, putative [Leishmania ma... 77 8e-013 gb|EAN77952.1| dynein heavy chain, putative [Trypanosoma br... 75 3e-012 gb|EAN98187.1| dynein heavy chain, putative [Trypanosoma cr... 74 5e-012 gb|EAL39116.1| ENSANGP00000028243 [Anopheles gambiae str. P... 68 4e-010 gb|EAA14424.2| ENSANGP00000020894 [Anopheles gambiae str. P... 68 4e-010 ref|XP_608502.2| PREDICTED: similar to CG7092-PA, partial [... 66 1e-009 ref|XP_395072.2| PREDICTED: similar to CG7092-PA [Apis mell... 66 2e-009 emb|CAJ05746.1| dynein heavy chain, putative [Leishmania ma... 65 2e-009 ref|XP_795116.1| PREDICTED: similar to dynein, axonemal, he... 65 3e-009 dbj|BAB21788.2| KIAA1697 protein [Homo sapiens] 65 4e-009 >emb|CAJ09048.1| dynein heavy chain, putative [Leishmania major] Length = 4172 Score = 77.0 bits (188), Expect = 8e-013 Identities = 37/94 (39%), Positives = 54/94 (57%) Frame = +1
ML AA Q+ Y GPFT YR++++ L EL SIL ++ D ++ WI N Sbjct: 3047 MLVAAGQIAYCGPFTSVYREELLELWGKELDQRSILHRAQYSIYHTLQDAVETREWILNG 3106
LP D S+ENA+ A +P+++DPQ Q NR++ Sbjct: 3107 LPMDTLSIENALFAKSARRWPLLIDPQTQGNRWI 3140 ------------------ gnl|ti|818421713 name:POAA-aaa66g11.b1 mate_pair:818423409 (880 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_637165.1| bifunctional aspartokinase/homoserine dehy... 72 3e-011 ref|YP_243462.1| aspartokinase/homoserine dehydrogenase I [... 72 3e-011 ref|YP_200881.1| aspartokinase; homoserine dehydrogenase I ... 72 3e-011 ref|YP_363597.1| bifunctional aspartokinase/homoserine dehy... 72 3e-011 ref|NP_642146.1| aspartokinase [Xanthomonas axonopodis pv. ... 72 3e-011 ref|NP_069534.1| aspartate kinase (lysC) [Archaeoglobus ful... 70 1e-010 dbj|BAB19799.1| aspartate kinase-homoserine dehydrogenase [... 69 2e-010 ref|ZP_00731921.1| Aspartate kinase., Homoserine dehydrogen... 69 2e-010 ref|ZP_00838865.1| Aspartate kinase [Shewanella sp. PV-4] >... 67 6e-010 gb|AAM03585.1| aspartate kinase [Methanosarcina acetivorans... 67 8e-010 >ref|NP_637165.1| bifunctional aspartokinase/homoserine dehydrogenase I [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41089.1| bifunctional aspartokinase/homoserine dehydrogenase I [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 835 Score = 72.0 bits (175), Expect = 3e-011 Identities = 31/54 (57%), Positives = 41/54 (75%) Frame = -3
V E V L +S++EA ELAYFGAK++HPQ M+PA++ +PI IRN F PE PG+ Sbjct: 256 VPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGT 309 -------------- gnl|ti|818423409 name:POAA-aaa66g11.g1 mate_pair:818421713 (556 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_637165.1| bifunctional aspartokinase/homoserine dehy... 67 3e-010 ref|YP_243462.1| aspartokinase/homoserine dehydrogenase I [... 67 3e-010 ref|YP_200881.1| aspartokinase; homoserine dehydrogenase I ... 67 3e-010 ref|YP_363597.1| bifunctional aspartokinase/homoserine dehy... 67 3e-010 ref|NP_642146.1| aspartokinase [Xanthomonas axonopodis pv. ... 67 3e-010 dbj|BAB19799.1| aspartate kinase-homoserine dehydrogenase [... 64 4e-009 ref|NP_069534.1| aspartate kinase (lysC) [Archaeoglobus ful... 63 5e-009 ref|ZP_00838865.1| Aspartate kinase [Shewanella sp. PV-4] >... 62 8e-009 ref|ZP_00680599.1| Aspartate kinase [Xylella fastidiosa Ann... 62 1e-008 ref|ZP_00731921.1| Aspartate kinase., Homoserine dehydrogen... 62 1e-008 >ref|NP_637165.1| bifunctional aspartokinase/homoserine dehydrogenase I [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM41089.1| bifunctional aspartokinase/homoserine dehydrogenase I [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 835 Score = 67.0 bits (162), Expect = 3e-010 Identities = 27/44 (61%), Positives = 36/44 (81%) Frame = -3
S++EA ELAYFGAK++HPQ M+PA++ +PI IRN F PE PG+ Sbjct: 266 SYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGT 309 ----------------- nl|ti|818421722 name:POAA-aaa66i09.b1 mate_pair:818423417 (707 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_646136.1| putative histone-like transcription factor... 67 7e-010 ref|XP_759306.1| hypothetical protein UM03159.1 [Ustilago m... 55 2e-006 ref|NP_851061.1| transcription factor [Arabidopsis thaliana... 55 2e-006 ref|NP_001031927.1| unknown protein [Arabidopsis thaliana] 55 2e-006 pir||S53582 TATA-binding protein-associated phosphoprotein ... 55 2e-006 emb|CAB93720.1| DR1-like protein [Arabidopsis thaliana] 54 4e-006 ref|NP_568190.1| DNA binding / transcription factor [Arabid... 54 4e-006 gb|AAL73489.1| repressor protein [Glycine max] 54 6e-006 gb|AAL73485.1| repressor protein [Oryza sativa] 50 5e-005 gb|AAL73486.1| repressor protein [Triticum aestivum] 50 7e-005 >ref|XP_646136.1| putative histone-like transcription factor [Dictyostelium discoideum] gb|EAL72169.1| putative histone-like transcription factor [Dictyostelium discoideum] Length = 178 Score = 66.6 bits (161), Expect = 7e-010 Identities = 37/61 (60%), Positives = 42/61 (68%), Gaps = 2/61 (3%) Frame = -2
M DK+D +NLSLPK ATVSKLIKEMLP+D+KCSN+TRDLILECC Sbjct: 1 MGDKNDKEDNLSLPK----------------ATVSKLIKEMLPQDVKCSNETRDLILECC 44
V Sbjct: 45 V 45 Score = 51.6 bits (122), Expect = 2e-005 Identities = 22/33 (66%), Positives = 30/33 (90%) Frame = -1
+EFIHL+SSEAND+ +E+K+TIA EHV+KAL+ Sbjct: 45 VEFIHLISSEANDICGREQKRTIAAEHVIKALT 77 ------------ gnl|ti|818423449 name:POAA-aaa66o07.g1 mate_pair:818421753 (900 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK23333.1| enoyl-CoA hydratase/isomerase family protein... 56 1e-006 ref|XP_637021.1| hypothetical protein DDB0187604 [Dictyoste... 54 6e-006 emb|CAB78378.1| 3-hydroxyisobutyryl-coenzyme A hydrolase-li... 54 7e-006 ref|NP_193072.2| catalytic [Arabidopsis thaliana] 54 7e-006 ref|NP_108497.1| 3-hydroxyisobutyryl-Coenzyme A hydrolase [... 54 1e-005 gb|AAK89890.1| AGR_L_2647p [Agrobacterium tumefaciens str. ... 54 1e-005 ref|NP_534002.1| enoyl-CoA hydratase [Agrobacterium tumefac... 54 1e-005 ref|NP_001026414.1| 3-hydroxyisobutyryl-Coenzyme A hydrolas... 53 1e-005 emb|CAJ08899.1| 3-hydroxyisobutyryl-coenzyme a hydrolase, p... 52 2e-005 ref|ZP_00375774.1| enoyl-CoA hydratase/isomerase family pro... 52 2e-005 >gb|AAK23333.1| enoyl-CoA hydratase/isomerase family protein [Caulobacter crescentus CB15] ref|NP_420165.1| enoyl-CoA hydratase/isomerase family protein [Caulobacter crescentus CB15] Length = 350 Score = 56.2 bits (134), Expect = 1e-006 Identities = 24/49 (48%), Positives = 34/49 (69%) Frame = -1
KHDF EGVRAV++DK + RW P +E+V++ + + FA LPP E+ P Sbjct: 300 KHDFIEGVRAVIVDKDNAPRWSPARVEDVTDAALAEIFAPLPPGEEWTP 348 ------------- gnl|ti|818423454 name:POAA-aaa66o17.g1 mate_pair:818421758 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 9e-009 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 1e-006 gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005 ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 46 0.002 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.004 gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282
Identities = 32/36 (88%), Positives = 34/36 (94%) Frame = +2
VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114 Score = 39.7 bits (91), Expect = 0.14 Identities = 26/51 (50%), Positives = 27/51 (52%) Frame = +3 Query: 339 SAYTIGLNHWFLSY*SDLLSGHTAAPKRLLVVK*EGKTNLSHDGLNPAHVP 491 SA T N FLSY +LL H GKTNLSHDGL PAHVP Sbjct: 34 SAMTNCANQRFLSYYVELLLRHCHQ---------WGKTNLSHDGLIPAHVP 75 ------------------- gnl|ti|818421301 name:POAA-aaa67a08.b1 mate_pair:820219905 (905 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_636652.1| villin [Dictyostelium discoideum] >gi|6046... 63 2e-008 emb|CAD20809.1| villidin [Dictyostelium discoideum] >gi|264... 63 2e-008 ref|ZP_00638514.1| hypothetical protein SfriDRAFT_2667 [She... 61 6e-008 ref|XP_779074.1| hypothetical protein GLP_49_96114_97016 [G... 54 1e-005 ref|XP_655822.1| villin-related protein [Entamoeba histolyt... 52 4e-005 ref|XP_640228.1| hypothetical protein DDB0204950 [Dictyoste... 52 4e-005 gb|AAU88242.1| ubiquitous gelsolin; U-gelsolin [Danio rerio... 51 5e-005 Yüklə 3,49 Mb. Dostları ilə paylaş:
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