Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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FK +DE+ K+RVE+KNKLENY FTV++++ D ++ K S+S Sbjct: 523 FKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDS 563 Score = 47.4 bits (111), Expect = 2e-004 Identities = 20/40 (50%), Positives = 32/40 (80%) Frame = +1 Query: 121 KIKDEEAKERVEAKNKLENYVYTVRSTLNDPALSDKFSNS 240 K +DE+ K+RVE+KNKLENY +TV++++ D ++ K S+S Sbjct: 524 KQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDS 563 ------------------ gnl|ti|818423493 name:POAA-aaa79g22.g1 mate_pair:818422468 (908 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAC63276.1| apocytochrome b [Physarum polycephalum] >gi|... 87 1e-015 ref|ZP_00142183.1| cytochrome b [Rickettsia sibirica 246] >... 54 6e-006 ref|NP_220656.1| CYTOCHROME B (petB) [Rickettsia prowazeki... 54 6e-006 ref|NP_359996.1| cytochrome b [Rickettsia conorii str. Mali... 54 6e-006 ref|ZP_00153407.1| COG1290: Cytochrome b subunit of the bc ... 54 6e-006 gb|AAY61860.1| Cytochrome b [Rickettsia felis URRWXCal2] >g... 54 7e-006 ref|ZP_00340070.1| COG1290: Cytochrome b subunit of the bc ... 54 7e-006 ref|YP_067225.1| Complex III (mitochondrial electron transp... 52 3e-005 ref|ZP_00871427.1| ubiquinol-cytochrome c reductase, cytoch... 51 5e-005 ref|YP_222220.1| PetB, ubiquinol-cytochrome c reductase, cy... 51 6e-005 >gb|AAC63276.1| apocytochrome b [Physarum polycephalum] gb|AAC63275.1| apocytochrome b [Physarum polycephalum] Length = 392
Identities = 85/186 (45%), Positives = 94/186 (50%), Gaps = 11/186 (5%) Frame = +2
RSIDEI F + FF + SFIPNS I EHIV Sbjct: 212 RSIDEIPFHPYYTIKDFFSVILFIAIIIFFVSFIPNSLGHPDNYIPANPDQTPEHIVPEW 271
F F + + S NKLLGVIALVASII +LL + F SVYK + L I Sbjct: 272 YFLPF-YAILRSIPNKLLGVIALVASII----FLLILPFIDRPLTRSSVYKPFIAKLNIL 326
++ F GQSPLEE F I F IIVSQIDRYFLKAVQKLPDNIV Sbjct: 327 FIADCFVLGYIGQSPLEEPFLFLGRLTTLIYFAYFFVFIIVSQIDRYFLKAVQKLPDNIV 386
YNSLSK
Sbjct: 387 YNSLSK 392 ------------------ gnl|ti|818422469 name:POAA-aaa79g24.b1 mate_pair:818423494 (482 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_326309.1| CELL DIVISION CONTROL PROTEIN 42 HOMOLOG (... 61 2e-008 emb|CAD27475.1| putative RHO small GTPase [Anopheles gambiae] 60 3e-008 gb|EAA00947.3| ENSANGP00000022835 [Anopheles gambiae str. P... 60 3e-008 gb|EAL38571.1| ENSANGP00000026005 [Anopheles gambiae str. P... 60 3e-008 emb|CAC88352.1| small GTPase [Drosophila melanogaster] >gi|... 60 3e-008 gb|EAL27028.1| GA18989-PA [Drosophila pseudoobscura] 60 3e-008 ref|XP_624520.1| PREDICTED: similar to ENSANGP00000022835 [... 59 6e-008 dbj|BAE40049.1| unnamed protein product [Mus musculus] 59 8e-008 gb|AAX89406.1| CDC42 [Phallusia mammilata] 58 1e-007 gb|AAH75761.1| Cdc42l protein [Danio rerio] >gi|28856238|gb... 58 1e-007 >ref|XP_326309.1| CELL DIVISION CONTROL PROTEIN 42 HOMOLOG (CDC42SP) [Neurospora crassa]
gb|EAA28109.1| CELL DIVISION CONTROL PROTEIN 42 HOMOLOG (CDC42SP) [Neurospora crassa]
Length = 207 Score = 60.8 bits (146), Expect = 2e-008 Identities = 31/80 (38%), Positives = 48/80 (60%) Frame = +3
+T V L+ F VA SF+ +S+KWAPE+ HCPG PF++V T+ DLR S K Sbjct: 87 QTDVFLICFSVASPASFENVSQKWAPEVNHHCPGVPFLIVGTQKDLR----------SDK 136
+ KL + +Q+ + ++G+ Sbjct: 137 ELRDKLAQRKQSMIEFKQGE 156 ----------------- gnl|ti|818423497 name:POAA-aaa79i08.g1 mate_pair:818422472 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_642363.1| hypothetical protein DDB0205452 [Dictyoste... 77 8e-013 ref|XP_639991.1| hypothetical protein DDB0218665 [Dictyoste... 69 2e-010 ref|XP_787177.1| PREDICTED: similar to splicing factor, arg... 53 1e-005 ref|NP_190918.3| RSZ32; nucleic acid binding [Arabidopsis t... 52 3e-005 gb|AAK92735.1| putative transformer-SR ribonucleoprotein [A... 50 1e-004 ref|NP_563787.2| RNA binding / nucleic acid binding [Arabid... 50 1e-004 emb|CAG06358.1| unnamed protein product [Tetraodon nigrovir... 49 2e-004 gb|AAF79558.1| F22G5.31 [Arabidopsis thaliana] 47 9e-004 emb|CAI76433.1| RNA-binding protein, putative [Theileria an... 47 0.001 gb|AAH77393.1| MGC81677 protein [Xenopus laevis] 45 0.003 >ref|XP_642363.1| hypothetical protein DDB0205452 [Dictyostelium discoideum] gb|EAL68389.1| hypothetical protein DDB0205452 [Dictyostelium discoideum] Length = 463
Identities = 52/121 (42%), Positives = 61/121 (50%), Gaps = 7/121 (5%) Frame = -1
RS RD G DS CYNC +SGH ARDC E PRNP YADT+GT D R Sbjct: 285 RSDRRDNGGPPMSKFDSI-CYNCRKSGHYARDCQERPRNPNYADTKGTL------KDSGR 337
+ DR + + R YD D RRS D + +RD+ D S RDRD+YS Sbjct: 338 FHPYTNDRRGNNFSPRRRYD-DDRRSGDHQRERDFDNND------------SGRDRDNYS 384
S ------------------ gnl|ti|818422478 name:POAA-aaa79k06.b1 mate_pair:818423504 (915 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAR82779.1| LD31436p [Drosophila melanogaster] 65 3e-009 gb|AAL65911.1| multiple ankyrin repeat single KH domain pro... 65 3e-009 gb|AAO41601.1| CG33106-PB, isoform B [Drosophila melanogast... 65 3e-009 gb|EAL40577.1| ENSANGP00000026224 [Anopheles gambiae str. P... 65 3e-009 ref|XP_341552.2| PREDICTED: similar to Ankyrin repeat and S... 64 1e-008 ref|NP_840068.1| ankyrin repeat and SOCS box-containing pro... 63 2e-008 ref|XP_850745.1| PREDICTED: similar to ankyrin repeat and S... 63 2e-008 emb|CAH72614.1| ankyrin repeat and SOCS box-containing 13 [... 62 3e-008 ref|XP_507635.1| PREDICTED: similar to Ankyrin repeat and S... 62 3e-008 emb|CAH72615.1| ankyrin repeat and SOCS box-containing 13 [... 62 3e-008 >gb|AAR82779.1| LD31436p [Drosophila melanogaster] Length = 2851
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 4/91 (4%) Frame = -3
+ E A ++V+L+L H + C TPLM AC G ++VVKVLLK GA +E + Sbjct: 59 LMEAASAGHLDIVKLLLNHNADVNAHCATGNTPLMFACAGGQVDVVKVLLKHGANVEEQN 118
G+T PL+EA +G+ VA++L+ +GA + Sbjct: 119 ENGHT--PLMEAASAGHVEVAKVLLEHGAGI 147 Score = 54.3 bits (129), Expect = 6e-006 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 3/90 (3%) Frame = -3 Query: 532 IYEVACETDAELVELMLQHGESPDTCLQS--GTPLMIACRKGNIEVVKVLLKFGAKIEHK 359 + E A E+ +++L+HG +T + L +AC KG++++V+ LL+ GA EHK Sbjct: 125 LMEAASAGHVEVAKVLLEHGAGINTHSNEFKESALTLACYKGHLDMVRFLLQAGADQEHK 184
L+EA G+ VARLL+++GAQV Sbjct: 185 TDEMHTALMEASMDGHVEVARLLLDSGAQV 214 ------------------- gnl|ti|818422490 name:POAA-aaa79m12.b1 mate_pair:818423518 (877 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAR37819.1| membrane protein, putative [uncultured bacte... 65 3e-009 gb|AAO51176.1| similar to Mus musculus (Mouse). Adult male ... 65 4e-009 ref|XP_642802.1| hypothetical protein DDB0217924 [Dictyoste... 65 4e-009 ref|XP_640680.1| hypothetical protein DDB0205585 [Dictyoste... 63 1e-008 ref|XP_784522.1| PREDICTED: similar to putative protein, wi... 58 4e-007 dbj|BAC30675.1| unnamed protein product [Mus musculus] 58 5e-007 dbj|BAC30271.1| unnamed protein product [Mus musculus] 58 5e-007 gb|AAH88041.1| Hypothetical protein LOC496770 [Xenopus trop... 58 5e-007 ref|YP_001329.1| C-5 sterol desaturase [Leptospira interrog... 58 5e-007 dbj|BAE37216.1| unnamed protein product [Mus musculus] 58 5e-007 >gb|AAR37819.1| membrane protein, putative [uncultured bacterium 443] Length = 403
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 7/81 (8%) Frame = +1
GG + +L + F+P+ L +++ L Y HR GH + L WA+H HH S+ Sbjct: 56 GGSVYAWLMTITPFAPWRLDGWMGWVLAFILYDLCYYWSHRAGHEIKLFWASHVVHHQSE 115
DYNLSTALRQ + +LFG +F Sbjct: 116 DYNLSTALRQTSTGFLFGWIF 136 ------------------- gnl|ti|820219568 name:POAA-aaa80b05.b1 (837 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAO52551.1| similar to Dictyostelium discoideum (Slime m... 73 1e-011 ref|XP_644094.1| hypothetical protein DDB0217527 [Dictyoste... 73 1e-011 ref|XP_647201.1| hypothetical protein DDB0189441 [Dictyoste... 70 1e-010 ref|XP_638002.1| hypothetical protein DDB0215861 [Dictyoste... 40 0.075 gb|EAM74994.1| ABC transporter [Kineococcus radiotolerans S... 40 0.075 pir||T49494 condensin complex component cnd2 related protei... 39 0.17 ref|NP_473073.2| hypothetical protein PFB0725c [Plasmodium ... 39 0.22 ref|XP_802840.1| syntaxin [Trypanosoma cruzi] >gi|70865055|... 35 2.4 >gb|AAO52551.1| similar to Dictyostelium discoideum (Slime mold). Histidine kinase A Length = 1752
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 3/81 (3%) Frame = -2
YLP+++L NFIT W A A + KQ +D DY+RM +Q R KIPL D PW + W Sbjct: 990 YLPSSVLKNFITVLWKNAIATKKIIKQPQRDSDYVRMVEQFEYREKIPLLDLPWGASKPW 1049
T +D+R+D+D +L+ FY+ + Sbjct: 1050 TLVDLRDDYDEDLMVRFYNEL 1070 ---------------- gnl|ti|820219590 name:POAA-aaa80f05.b1 mate_pair:818420654 (672 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAD73789.1| putative uncharacterized hypothalamus prote... 70 6e-011 ref|NP_915364.1| putative uncharacterized hypothalamus prot... 70 6e-011 ref|NP_179618.1| nucleic acid binding [Arabidopsis thaliana... 66 1e-009 ref|XP_664526.1| hypothetical protein AN6922.2 [Aspergillus... 64 3e-009 gb|EAL91225.1| CCCH finger DNA binding protein, putative [A... 60 6e-008 ref|XP_502512.1| hypothetical protein [Yarrowia lipolytica]... 60 8e-008 ref|XP_721769.1| hypothetical protein CaO19_1697 [Candida a... 59 2e-007 ref|XP_629591.1| hypothetical protein DDB0184365 [Dictyoste... 58 2e-007 dbj|BAB24173.1| unnamed protein product [Mus musculus] 57 4e-007 emb|CAG00335.1| unnamed protein product [Tetraodon nigrovir... 57 4e-007 >dbj|BAD73789.1| putative uncharacterized hypothalamus protein HT010 [Oryza sativa (japonica cultivar-group)] dbj|BAD73384.1| putative uncharacterized hypothalamus protein HT010 [Oryza sativa (japonica cultivar-group)] Length = 366 Score = 70.1 bits (170), Expect = 6e-011 Identities = 30/42 (71%), Positives = 35/42 (83%) Frame = +3
I+CE+FKVGQC KG KCK+SHDL V+ K KIDIYTD+R AE Sbjct: 94 IVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIYTDKRDAE 135 --------------------- gnl|ti|818420679 name:POAA-aaa80j19.g1 mate_pair:820219616 (868 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK21974.1| rRNA promoter binding protein [Rattus norveg... 67 6e-010 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 51 5e-005 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 47 9e-004 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 44 0.006 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 43 0.012 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 41 0.047 gb|EAA21327.1| putative senescence-associated protein [Plas... 40 0.10 pir||A35664 PpoI endonuclease - slime mold (Physarum polyce... 40 0.14 gb|AAB65764.1| endonuclease [Physarum polycephalum] 40 0.14 ref|XP_767406.1| hypothetical protein GLP_748_1200_211 [Gia... 37 0.68 >gb|AAK21974.1| rRNA promoter binding protein [Rattus norvegicus] ref|NP_671477.1| rRNA promoter binding protein [Rattus norvegicus] Length = 295 Score = 67.4 bits (163), Expect = 6e-010 Identities = 43/83 (51%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = -2
AS+ A PA L P+ TQP+EPILIPKLRIRLA+FPY PE HLGDLLRI Sbjct: 135 ASSSRGARPAPLRAPARPTQPLEPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRI--W 192
G +P F G R RT Sbjct: 193 VRPGARFTPSPPDFQGPARAHRT 215 ----------------------- gnl|ti|820219631 name:POAA-aaa80n07.b1 mate_pair:818420693 (798 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 97 6e-019 ---------- gnl|ti|820219634 name:POAA-aaa80n13.b1 mate_pair:818420696 (402 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_107562.1| dihydroxy-acid dehydratase [Mesorhizobium ... 75 9e-013 ref|YP_348956.1| Dihydroxy-acid dehydratase [Pseudomonas fl... 74 2e-012 ref|YP_370802.1| Dihydroxy-acid dehydratase [Burkholderia s... 73 4e-012 ref|YP_275724.1| dihydroxy-acid dehydratase, putative [Pseu... 72 6e-012 emb|CAB61588.1| putative dihydroxy-acid dehydratase [Strept... 72 6e-012 ref|ZP_00691752.1| Dihydroxy-acid dehydratase [Rhodoferax f... 71 1e-011 ref|ZP_00856328.1| Dihydroxy-acid dehydratase [Shewanella s... 71 1e-011 ref|ZP_00852745.1| Dihydroxy-acid dehydratase [Shewanella s... 71 1e-011 ref|ZP_00815461.1| Dihydroxy-acid dehydratase [Shewanella p... 71 1e-011 ref|ZP_00471698.1| Dihydroxy-acid dehydratase [Chromohaloba... 69 5e-011 >ref|NP_107562.1| dihydroxy-acid dehydratase [Mesorhizobium loti MAFF303099] dbj|BAB53348.1| dihydroxy-acid dehydratase [Mesorhizobium loti MAFF303099] Length = 575
Identities = 35/43 (81%), Positives = 39/43 (90%) Frame = -3
+L RNL+SMDVEESIR NPIDGV+LL GCDKTTPA+LMGAA C Sbjct: 96 MLFRNLVSMDVEESIRGNPIDGVILLVGCDKTTPALLMGAASC 138 Score = 32.7 bits (73), Expect = 4.1 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -1 Query: 87 NADLPTILLSGGPMLNESTRGRD 19 + +LPTI +SGGPMLN RG D Sbjct: 137 SCNLPTITVSGGPMLNGKFRGHD 159 ---------- gnl|ti|820219637 name:POAA-aaa80n19.b1 mate_pair:818420699 (915 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P54697|MYOJ_DICDI Myosin IJ heavy chain >gi|1150766|gb|A... 91 7e-017 ref|XP_645195.1| myosin heavy chain [Dictyostelium discoide... 90 1e-016 gb|AAA79858.1| myosin 90 1e-016 ref|XP_346082.2| PREDICTED: similar to 40S ribosomal protei... 87 6e-016 emb|CAH65073.1| hypothetical protein [Gallus gallus] 82 3e-014 prf||2210342A myosin:SUBUNIT=heavy chain 82 3e-014 gb|AAC16467.1| unknown protein [Arabidopsis thaliana] 81 4e-014 emb|CAE59383.1| Hypothetical protein CBG02739 [Caenorhabdit... 81 4e-014 gb|AAH84352.1| LOC495149 protein [Xenopus laevis] 79 2e-013 gb|AAF19255.1|AC004858_3 U1 small ribonucleoprotein 1SNRP h... 79 2e-013 >sp|P54697|MYOJ_DICDI Myosin IJ heavy chain gb|AAA85186.1| myosin heavy chain Length = 2245
Identities = 43/71 (60%), Positives = 58/71 (81%) Frame = -1
E +P+CILTLLDE P++ L+ KLY+K+T H++FEKPRFS++AFTI+HYAGKVT Sbjct: 548 EKNPICILTLLDEETMFPKATPQTLA-TKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVT 606
Y+T+ FL+KNK Sbjct: 607 YETDQFLDKNK 617 Score = 50.4 bits (119), Expect = 8e-005 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 20/79 (25%) Frame = -2 Query: 344 QDYIIPEQLAVLQKSDFPFMKTLIK---AVVQAQGGQQSGT-----------------KF 225 +D+IIPEQ+++LQ+S+F F+K L+ Q+ GG G KF Sbjct: 617 KDFIIPEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKF 676
SVG+QF+TSL +K +S Sbjct: 677 LSVGSQFSTSLATLMKTIS 695 ---------- gnl|ti|818420702 name:POAA-aaa80p01.g1 mate_pair:820219640 (515 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_689550.1| PREDICTED: similar to Anaphase promoting c... 53 5e-006 emb|CAG02261.1| unnamed protein product [Tetraodon nigrovir... 49 8e-005 dbj|BAE41951.1| unnamed protein product [Mus musculus] 48 2e-004 dbj|BAC98161.1| mKIAA1406 protein [Mus musculus] 48 2e-004 gb|AAI07472.1| Unknown (protein for IMAGE:7446651) [Rattus ... 48 2e-004 ref|NP_780509.1| anaphase-promoting complex subunit 2 [Mus ... 48 2e-004 gb|AAH27351.1| Anapc2 protein [Mus musculus] 48 2e-004 dbj|BAE32605.1| unnamed protein product [Mus musculus] 48 2e-004 ref|XP_215994.3| PREDICTED: similar to mKIAA1406 protein [R... 48 2e-004 ref|XP_548357.2| PREDICTED: similar to Anaphase promoting c... 47 2e-004 >ref|XP_689550.1| PREDICTED: similar to Anaphase promoting complex subunit 2 (APC2) (Cyclosome subunit 2) [Danio rerio] Length = 793
Identities = 22/43 (51%), Positives = 33/43 (76%) Frame = -3
RI E+FS+I DFPES P ++DL CL +T+Q + L+A+LK ++ Sbjct: 309 RIEELFSIIRDFPESTPAIEDLKFCLERTNQRQQLLASLKSAF 351 --------- gnl|ti|818420703 name:POAA-aaa80p05.g1 mate_pair:820219641 (518 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00832047.1| COG2017: Galactose mutarotase and relate... 63 5e-009 gb|EAM75090.1| Aldose 1-epimerase [Kineococcus radiotoleran... 62 9e-009 ref|ZP_00829491.1| COG2017: Galactose mutarotase and relate... 61 1e-008 ref|ZP_00578895.1| Aldose 1-epimerase [Sphingopyxis alasken... 60 3e-008 gb|AAW29083.1| aldose 1-epimerase [Entamoeba histolytica] >... 59 6e-008 gb|AAV89513.1| aldose 1-epimerase precursor [Zymomonas mobi... 59 9e-008 gb|AAO78635.1| aldose 1-epimerase precursor [Bacteroides th... 58 1e-007 gb|AAD35370.1| aldose 1-epimerase [Thermotoga maritima MSB8... 58 2e-007 ref|ZP_00820946.1| COG2017: Galactose mutarotase and relate... 58 2e-007 ref|ZP_00824476.1| COG2017: Galactose mutarotase and relate... 57 2e-007 >ref|ZP_00832047.1| COG2017: Galactose mutarotase and related enzymes [Yersinia intermedia ATCC 29909] Length = 354
Identities = 27/54 (50%), Positives = 37/54 (68%) Frame = +3
A+ DKT N+TNHAY+NLDG GL + ++ +FAD YLP D +P+GE+ V Sbjct: 169 AQVDKTCPVNLTNHAYFNLDGEGLDVRAHRLQLFADRYLPVDSEGIPSGELANV 222 --------- gnl|ti|818419831 name:POAA-aaa81d10.g1 mate_pair:818419521 (364 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_876835.1| PREDICTED: similar to tRNA isopentenyltran... 50 3e-005 ref|XP_614975.2| PREDICTED: similar to tRNA isopentenyltran... 50 3e-005 emb|CAI19406.1| tRNA isopentenyltransferase 1 [Homo sapiens] 49 4e-005 dbj|BAD97198.1| tRNA isopentenyltransferase 1 variant [Homo... 49 4e-005 gb|AAI07570.1| Unknown (protein for MGC:104350) [Homo sapie... 49 4e-005 gb|AAW63401.1| tRNA isopentenylpyrophosphate transferase is... 49 4e-005 gb|AAW63395.1| tRNA isopentenylpyrophosphate transferase is... 49 4e-005 gb|AAW63394.1| tRNA isopentenylpyrophosphate transferase is... 49 4e-005 gb|AAL14107.1| tRNA isopentenyl transferase [Homo sapiens] 49 4e-005 ref|XP_417825.1| PREDICTED: similar to tRNA isopentenyltran... 49 5e-005 >ref|XP_876835.1| PREDICTED: similar to tRNA isopentenyltransferase 1 isoform 3 [Bos taurus]
Length = 441 Score = 49.7 bits (117), Expect = 3e-005 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = -1
IEDIFARD+IPI+VGGT+Y+ SLLW V+A Sbjct: 106 IEDIFARDKIPIVVGGTNYYIESLLWKVLVNA 137 ----------- gnl|ti|818419838 name:POAA-aaa81f02.g1 mate_pair:818419528 (912 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_786787.1| PREDICTED: similar to Aldehyde dehydrogena... 54 6e-006 ref|XP_638906.1| hypothetical protein DDB0218543 [Dictyoste... 52 3e-005 gb|AAF80471.1| class I aldehyde dehydrogenase [Taeniopygia ... 50 8e-005 gb|AAL99613.1| mitochondrial aldehyde dehydrogenase RF2B [Z... 50 1e-004 ref|XP_641074.1| hypothetical protein DDB0206068 [Dictyoste... 50 1e-004 dbj|BAB92018.1| mitochondrial aldehyde dehydrogenase [Sorgh... 50 1e-004 gb|AAL99614.2| mitochondrial aldehyde dehydrogenase RF2B [Z... 50 1e-004 ref|XP_575817.1| PREDICTED: aldehyde dehydrogenase 1 family... 49 2e-004 ref|NP_001011975.1| aldehyde dehydrogenase 1 family, member... 49 2e-004 gb|AAX27911.1| unknown [Schistosoma japonicum] 49 2e-004 >ref|XP_786787.1| PREDICTED: similar to Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2) (ALDHI) (ALDH-E2) [Strongylocentrotus purpuratus] Length = 538 Score = 54.3 bits (129), Expect = 6e-006 Identities = 23/34 (67%), Positives = 28/34 (82%) Frame = -1
DLD A E SH AIFWNMGQAC AGSR FV+++++ Sbjct: 320 DLDHAVEQSHSAIFWNMGQACCAGSRTFVEDKIY 353 Score = 33.9 bits (76), Expect = 8.1 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = -2 Query: 302 QIYDQFLAKIAEKAKQRIAGDRKDPKTNFGPQV 204 +IYD+F+ + E+AK ++ GD D + GPQ+ Sbjct: 351 KIYDEFVERSVERAKSKVVGDPFDMSKDQGPQI 383 ---------- PP24_Resultat gnl|ti|818419554 name:POAA-aaa81j18.b1 mate_pair:818419866 (895 letters) Score E
Sequences producing significant alignments: (bits) Value Yüklə 3,49 Mb. Dostları ilə paylaş:
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