Alagappa university


Unit - IV Role of ethnobotany in conservation



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Unit - IV
Role of ethnobotany in conservation: Sacred grooves, taboos and deity associated, ecological role, Elementary account on the sacred grooves in Tamilnadu. Sthalavrikshas and its importance, Role of ethnic groups in conservation of plant genetic resources. Endangered taxa and forest management (participatory forest management).
Unit – V
Ethnobotany and legal aspects: Ethnobotany as a tool to protect interests of ethnic groups. Sharing of wealth concept with few examples from India. Biopiracy, Intellectual Property Rights and Traditional Knowledge.
Suggested Readings:

  1. S.K. Jain, Manual of Ethnobotany, Scientific Publishers, Jodhpur, 1995.

  2. S.K. Jain (ed.) Glimpses of Indian. Ethnobotny, Oxford and I B H, New Delhi – 1981.

Lone et al,. Palaeoethnobotany

  1. S.K. Jain (ed.) 1989. Methods and approaches in ethnobotany. Society of ethnobotanists, Lucknow, India.

  2. S.K. Jain, 1990. Contributions of Indian ethnobotny. Scientific publishers, Jodhpur.

  3. Colton C.M. 1997. Ethnobotany – Principles and applications. John Wiley and sons –_Chichester

  4. Rama Ro, N and A.N. Henry (1996). The Ethnobotany of Eastern Ghats in Andhra Pradesh, India. Botanical Survey of India. Howrah.

  5. Rajiv K. Sinha – Ethnobotany The Renaissance of Traditional Herbal Medicine – INA –SHREE Publishers, Jaipur-1996.

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I YEAR – II SEMESTER

COURSE CODE: 7MBO2C1
CORE COURSE - VI – TAXONOMY OF ANGIOSPERMS AND ECONOMIC BOTANY

Course Objectives

  1. To demonstrate proficiency with the basic terminology of plant morphology.

  2. To recognize and identify major families of plants and their economic importance


Unit – I

History and principles of classification - : System of classification with merits and demerits: Artificial System: John Ray, Linnaeus: Natural Systems: Jussie, de Candolle, Bentham and Hooker Phylogenetic systems: Engler and Prantle, Hutchinson; Takhtajan. Phylogeny of Angiosperms: Origin, evolution and interrelationship.


Unit – II

Modern trends in classification: Taximetrics, Chemotaxonomy (Micromolecules (Primary and secondary metabolites), Macromolecules (Proteins, nucleic acids, polysaccharides))and Biosystematics. Taxonomy in relation to Anatomy, floral anatomy, Palynology, Embryology Ecology, Serology and Cytology (each 3 examples) - Molecular Taxonomy - RFLP, 18S ribosomal RNA. Plant identification: Methods of Identification. Keys: types of keys, rules for construction of Keys, advantages and disadvantages.


Unit – III

Nomenclature: International code of Botanical Nomenclature (ICBN), Typification, Priority, Publication, Author citation and retention, choice and rejection of names, current changes. Botanical Survey of India (B.S.I) – Organization, function and contribution. National and International Herbaria and Botanical gardens. Taxonomic literature – taxonomic index, monographs and revisions. Bibliographies, catalogues and review serials, periodicals, glossaries, dictionaries, icons and floras.


Unit – IV

A Study of the following families and their economic importances: (1) Menispermaceae, (2) Capparidaceae, (3) Polygalaceae, (4) Pedaliaceae, (5) Portulacaceae, (6) Caryophyllaceae, (7) Vitaceae, (8) Combreataceae, (9) Onagraceae, (10) Aizoaceae, (11) Rhamnaceae, (12) Sapindaceae, (13) Oleaceae, (14) Rosaceae (15) Moringaceae, (16) Sapotaceae, (17) Gentianaceae, (18) Boraginaceae, (19) Verbenaceae, (20) Nytaginaceae, (21) Loranthaceae, (22) Aristolochiaceae, (23) Bignoniaceae, (24) Scrophulariaceae, (25) Lythraceae.


Unit – V

A Study of the following families and their economic importances: (26) Casuarinaceae, (27) Orchidaceae, (28) Commelinaceae, (29) Liliaceae, (30) Amaryllidaceae (31) Typhaceae, (32) Cyperaceae and (33) Poaceae. Economic Botany - Fibre types and Fibre yielding plants, Principal woods of India. Medicinal plants: Drugs obtained from roots, underground stems, barks, stems, leaves, flowers, fruits, seeds and entire plants. Spices and condiments: Spices obtained from roots, underground stems, barks, flower buds and flower, fruits, seed and leaves - Fatty oils: Drying and semidrying oils, Non-drying oils, Vegetable fats - Essential oils: Types, oil yielding plants.


Suggested Readings:


  1. Subramaniyam, N.S. (1995) Modern Plant Taxonomy. Vikas Publishing House, New Delhi.

  2. Raychudhuri, S.P 1991. (Ed.) Recent advances in Medicinal aromatic and spice crops Vol.1 Today & Tomorrow’s printers and publishers, New Delhi.

  3. Vashista, P.C. (1990) – Taxonomy of Angiosperms – S.Chand & Co., New Delhi.

Singh, V. and Jain, V.K. (1989) Taxonomy of Angiosperms. Rastogi Publication, Meerut.

  1. Sivarajan, V.V. (1989) Introduction to principles of plant Taxonomy. Oxford and IBH, New Delhi.

  2. Hutchinson, J. (1973) The families of flowering plants. Oxford University Press, London.

  3. Heywood, V.H. (1967) Plant Taxonomy. Edward Arnold, Great Britain.

  4. Gamble, J.S. and Fisher, L.E.F. (1967) The Flora of the presidency of Madras (Vol. I – III). Botanical Survey of India, Calcutta.

  5. Davis, P.H. and Heywood, V.M. (1965) Principles of Angiosperm Taxonomy. Oliver and Boyd Edinburgh.

  6. Lawrence, G.H.M. (1955) The Taxonomy of vascular plants (Vol. I-IV). Central Book Depot, Allahabad Jeffery, C. An Introduction to Plant Taxonomy. J & A Churchill Ltd., London.

  7. Rendle, A.B. The Classification of flowering plants (Vol. I-II).

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I YEAR – II SEMESTER

COURSE CODE: 7MBO2C2
CORE COURSE - VII – GENETICS AND EVOLUTION

Course Objectives

  1. To study the progress made in the field of Genetics and evolution.

  2. To study basic molecular mechanism in organisms and how the genes unravel themselves in conferring the traits on the organism.

  3. To understand the principal, the hereditary mechanism, the structure and functions of genetic materials


Unit – I

Mendelian principles (Dominance, segregation, independent assortment), Concept of gene(Allele, multiple alleles, pseudoallele, complementation tests, fine structure analysis of genes), Extensions of Mendelian principles: Codominance, incomplete dominance, gene interactions, pleiotropy, genomic imprinting, penetrance and expressivity, phenocopy, linkage and crossing over, sex linkage, sex limited and sex influenced characters. Recombination (Homologous and non-homologous recombination including transposition).



Unit – II

Gene mapping methods(Linkage maps, tetrad analysis, mapping with molecular markers, mapping genes by interrupted mating, mapping by using somatic cell hybrids, development of mapping population in plants), Quantitative genetics (Polygenic inheritance, heritability and its measurements, QTL mapping), Extra chromosomal inheritance (Inheritance of Mitochondrial and chloroplast genes, maternal inheritance).


Unit - III

Human genetics (Pedigree analysis, lod score for linkage testing, karyotypes, genetic disorders), Mutation (Types, causes and detection, mutant types – lethal, conditional, biochemical, loss of function, gain of function, germinal verses somatic mutants, insertional mutagenesis), Structural and numerical alterations of chromosomes( Deletion, duplication, inversion, translocation, ploidy and their genetic implications).


Unit - IV

Evolution - Emergence of evolutionary thoughts (Lamarck; Darwin–concepts of variation, adaptation, struggle, fitness and natural selection), Origin of cells and unicellular evolution - Origin of basic biological molecules; Abiotic synthesis of organic monomers and polymers; Concept of Oparin and Haldane; Experiement of Miller (1953); The first cell; Evolution of prokaryotes; Origin of eukaryotic cells; Evolution of unicellular eukaryotes; Anaerobic metabolism, photosynthesis and aerobic metabolism.


Unit – V

Molecular Evolution - Concepts of neutral evolution, molecular divergence and molecular clocks; Molecular tools in phylogeny, classification and identification; Protein and nucleotide sequence analysis; origin of new genes and proteins; Gene duplication and divergence. The Mechanisms - Population genetics – Populations, Gene pool, Gene frequency; Hardy-Weinberg Law; concepts and rate of change in gene frequency through natural selection, migration and random genetic drift; Adaptive radiation; Isolating mechanisms; Speciation; Allopatricity and Sympatricity; Convergent evolution; Sexual selection; Co-evolution.



Suggested Readings:


  1. Gupta, P.K. (1994). Genetics. Rastogi Publication, Meerut, India.

  2. Graham, L.E. 1993. Origin of Land Plants. John Wiley & Sons, Inc. New York.

  3. Gifford, E.M. and E.S. foster. 1989. Morphology and Evolution of Vascular Plants. Third Edition. W.H. Freeman and Company. New York.

  4. Gensel, P.G., AND H.N. andrews. 1984. Plant Life in the Devonian. Praeger Publishers. New York.

  5. W.R.Atchlay & D.S. Woodnuff 1981. Evolution and speciation, Cambridge University Press, Cambridge.

  6. Gilber, N.W. (1978). Organellar Heredity, Revan Press, New York.

  7. Strickberger, M.V. (1977). Genetics, Mac Milian, New York.

  8. Gardener, E.J. (1975). Genetics, 5th Ed. Principles of Genetics, Johanwiley, New York.

  9. King, R.C. (1975). A Hand book of Genetics, Plenium Press, New York.

  10. Banks, H.P. 1970. Evolution and Plants of the Past. Wadsworth Publishing Co., Ic., Belmont. Calif.

  11. Delevoryas, T. 1962. Morphology and Evolution of Fossil Plants. Holt, Rinehart and Winston. New York.

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I YEAR – II SEMESTER

COURSE CODE: 7MBO2C3
CORE COURSE -VIII – FUNDAMENTAL PROCESSES, CELL COMMUNICATION AND CELL SIGNALING
Course Objectives

  1. To impart acquaintance about Fundamental Processes

  2. To provide familiarity in Cell Communication And Cell Signaling


Unit – I

DNA replication, repair and recombination (Unit of replication, enzymes involved, replication origin and replication fork, fidelity of replication, extrachromosomal replicons, DNA damage and repair mechanisms, homologous and site-specific recombination). RNA synthesis and processing (transcription factors and machinery, formation of initiation complex, transcription activator and repressor, RNA polymerases, capping, elongation, and termination, RNA processing, RNA editing, splicing, and polyadenylation, structure and function of different types of RNA, RNA transport).


Unit – II

Protein synthesis and processing (Ribosome, formation of initiation complex, initiation factors and their regulation, elongation and elongation factors, termination, genetic code, aminoacylation of tRNA, tRNA-identity, aminoacyltRNA synthetase, and translational proof-reading, translational inhibitors, Post- translational modification of proteins). Control of gene expression at transcription and translation level (regulating the expression of phages, viruses, prokaryotic and eukaryotic genes, role of chromatin in gene expression and gene silencing).


Unit – III

Cellular communication Regulation of hematopoiesis, general principles of cell communication, cell adhesion and roles of different adhesion molecules, gap junctions, extracellular matrix, integrins, neurotransmission and its regulation.

Cell signaling Hormones and their receptors, cell surface receptor, signaling through G-protein coupled receptors, signal transduction pathways, second messengers, regulation of signaling pathways, bacterial and plant two component systems, light signaling in plants, bacterial chemotaxis and quorum sensing.
Unit - IV

Innate and adaptive immune system Cells and molecules involved in innate and adaptive immunity, antigens, antigenicity and immunogenicity. B and T cell epitopes, structure and function of antibody molecules. Generation of antibody diversity, monoclonal antibodies, antibody engineering, antigen-antibody interactions.


Unit – V

MHC molecules, antigen processing and presentation, activation and differentiation of B and T cells, B and T cell receptors, humoral and cell mediated immune responses, primary and secondary immune modulation, the complement system, Toll-like receptors, cell-mediated effector functions, inflammation, hypersensitivity and autoimmunity, immune response during bacterial (tuberculosis), parasitic (malaria) and viral (HIV) infections, congenital and acquired immunodeficiencies, vaccines.



Suggested Readings:


  1. James D Watson, Tania A. Baker, Stephen P. Bell, Alexander Gann, Michael Levine and Richard Losick (2004) Benjamin Cummings Molecular Biology of the Gene

  2. G. M. Malacinski (2002) Essentials of Molecular Biology, Fourth Edition by, Jones & Bartlett Publishers.

  3. Ernst JM Helmreich (2001) The Biochemistry of cell signaling, Oxford University Press.

  4. Geoffrey M. Cooper (2000) The Cell – A Molecular Approach, Second edition, published by Sinauer Associates

  5. Harvey Lodish (2000) Molecular Biology of the Cell, Fourth edition, published by W.H. Freeman and Company.

  6. Archana Sharma. (1985). 2nd Ed. Chromosomes. Oxoford and IBH Publishing company.

  7. P. Aducci, Signal Transduction in Plants (Molecular and Cell Biology Updates)

  8. Heribert Hirt – Stress Response and Signal Transduction of Plants – URGV – Plant Genomics Research – Unité de Recherche en Génomique Végétale.htm

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I YEAR – II SEMESTER

COURSE CODE: 7MBO2P1
CORE COURSE - IX – PRACTICAL – II (Covering Core Courses VI, VII & VIII)
Taxonomy
Study of the plants belonging to the following families (Description, V.S. flower, section of ovary, floral diagram/s, floral formula/e and systematic position according to Bentham & Hooker’s system of classification):

Menispermaceae Capparidaceae Polygalaceae Pedaliaceae Portulacaceae Caryophyllaceae Vitaceae Combreataceae Onagraceae Aizoaceae Rhamnaceae Sapindaceae

Oleaceae Rosaceae Moringaceae Sapotaceae

Gentianaceae Boraginaceae Verbenaceae Nytaginaceae Loranthaceae Aristolochiaceae Bignoniaceae Scrophulariaceae Lythraceae Orchidaceae Commelinaceae Liliaceae Amaryllidaceae Typhaceae Cyperaceae Poaceae.


Submission of 30 herbarium specimens (Mounting of a properly dried and pressed specimen of any wild plant with herbarium label) with field note book and tour report in Certified record note is must for External Practical exam.
Study tour for 5 days is mandatory for plant collection from different habitats: Mandatory
Economic Botany
Study of economically useful plants in theory part (in Taxonomy and Economic botany) – their binomial, family name and morphology of Useful parts are to be studied.
Submission of 20 economically useful plants parts with their binomial, family name and uses is must for External Practical exam.
CORE COURSE VII - GENETICS AND EVOLUTION

Simple problems
segregation and independent assortment and gene interaction based on theory.

Incomplete dominance and gene interaction through seed ratios (9:7, 9:6:1, 13:3,

15:1, 12:3:1, 9:3:4).

Chromosome mapping from three point test cross – data, calculation and interference [Linkage and crossing over percentage].

Pedigree analysis for dominant and recessive autosomal and sex linked traits.

Problems from population genetics – Hardy Weinberg law


Photographs/Permanent Slides
Structural and numerical alterations of chromosomes

Down’s, Klinefelter’s and Turner’s syndromes

Translocation Ring, Laggards and Inversion Bridge.

Lamarck concepts of Evolution

Darwin–concepts of Evolution

Genetic drift

Adaptive radiation

Speciation

Allopatricity and Sympatricity
CORE COURSE VIII - FUNDAMENTAL PROCESSES, CELL COMMUNICATION AND CELL SIGNALING
Photographs/ Charts

DNA Replication

DNA damage and repair

RNA synthesis

Types of RNA

Protein synthesis

Prokaryotic Gene regulation and expression

Eukaryotic Gene regulation and expression

Cell communication

Cell adhesion

Gap junctions

Neurotransmission

Cell signaling Hormones and their receptors

Signal transduction pathways

Bacterial and plant two component systems

Light signaling in plants

Bacterial chemotaxis and quorum sensing.

Structure of antibodies

Monoclonal antibodies

Antibody engineering

Antigen-antibody interactions.

Demonstration

Blood group determination


RECORD/HERBARIUM: Duly certified record note, 30 Herbarium sheets and 15 Economic important plants should be submitted for the practical examination and those who do not submit the records need not be permitted to write the practical examination.
FIELD STUDY/ TOUR : The students should undertake as part of their course an institutional visit to BSI and a field study and plant collection for herbarium under the guidance of the staff for not less than FIVE DAYS with in the state and neighbouring state. Students who have not undertake the above activities shall forfeit the appropriated marks for this purpose (06 marks) for the practical examination.
For CC - IX – 45 marks for practical, 02 marks for Field Report, 04 for Herbarium, 04 for Economic botany and 05 marks for Record.
CORE COURSE - IX – PRACTICAL QUESTION

1. Dissect and Observe the floral characters of the specimen A and B. Identify its family, Genus and species.

Express the floral characters in technical terms. Draw labelled diagram of flower L.S, floral diagram &floral formula. Submit the slide with floral parts for evaluation.

(2 X 6 = 12 Marks)

2. Observe the morphological and floral characters of the given specimens C and identify its family through elimination process. Prepare an indented key. (Sketches not required)



(1 X 3 = 03 Marks)

3. Write the binomial of specimen D & E with author citation (2 X 1 = 02 Marks)

4. Write the names of the genus, species, family, morphology of the useful part and Economic importance of F,G, H & I (4 X 2 = 08 Marks)

5. As per your lot, Solve the given Genetic problem J. Tabulate the data observed and report the results. (1X5= 05 Marks)

6. Write notes of interest on K, L, M, N and O (5 X 3 = 15 Marks)

7. Tour report 02 Marks

8. Herbarium 04 Marks

9. Record 05 Marks

10. Economic botany 04 Marks

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60 Marks

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CORE COURSE - IX – PRACTICAL KEY
A - Polypetalae

B - Gamopetalae

C - 6 Different plants for key preparation

D - Polypetalae

E - Gamopetalae

F - Medicinal plant

G - Cereals/ Spices

H - Wood/ Fibre

I - Oil yielding plants

J - Genetic problem

K - Genetics

L - Evolution

M - Fundamental process

N - Cell communication

O - Cell signalling
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I YEAR – II SEMESTER

COURSE CODE: 7MBO2E1
ELECTIVE COURSE - II (A) – HERBAL BOTANY
Course Objectives



  1. To study the history and importance of Indian traditional system of medicine.

  2. To acquaint therapeutical and pharmaceutical knowledge about medicinal plants.

  3. To know the Pharmacological aspects of medicinal plants.

  4. To understand the cultivation aspects of medicinal plants.

  5. To acquire the knowledge in herbal cosmetology.


Unit – I

History of Medicinal plants. Importance and relevance of herbal drugs in Indian system of medicine. Traditional and Native Medicinal systems: Ayurveda, Siddha, Unani, Naturopathy and Folklore. Definition of Drug – Classification of natural drugs (Alphabetical, Morphological, Pharmacological, Chemical and Chemotaxonomical). Botanical description and active principle of root, rhizome, woods, bark, leaves, flowers, fruits, seeds and entire plants as drugs. Taxonomy study of some selected herbals.


Unit – II

Poisonous plants: Types of plant poison - action of poisons - treatment of poisons - some poisonous plants - their toxicity and action. Collection and preparation of natural drugs, Macroscopic and microscopic characters (Physical and Organoleptic), chemical constituents, adulterants, therapeutical and pharmaceutical uses of the following medicinal plants: Adadhoda, Aloe, Centella, Eugenia, Datura, Piper nigrum, Allium sativum, Azadirachta indica, Ocimum, Strychnos seeds, Senna leaf and Vinca.


Unit – III

Pharmacognosy: Definition and Scope - branches of Pharmacognosy; Phytochemicals - reserve materials - Secretory and Excretory materials. Adulteration of crude drugs and its detection - methods of adulteration - types of adulteration. Drug evaluation (Chemical, Physical and Biological), Phytochemical investigations, standardization and quality control of herbal drugs. Chemical tests for the active constituents of the following plants - Allium sativum, Acorus calamus, Curcuma longa, Senna angustifolia, Strychnos nuxvomica, Eugenia caryophyllata.


Unit – IV

Medicinal gardening: Gardens in the Hills and plains - house gardens - plants for gardening -

Medicinal plants of exports values - Rejuvenating herbs - medicinal uses of non flowering plants. Cultivation practices with reference to soil, propagation methods, irrigation, manuring, harvesting, processing, storage, pests, diseases, marketing and utilization of selected medicinal plants – Allium sativum, Acorus calamus, Bacopa monnieri, Cassia senna, Curcuma longa, Gloriosa superba, Phyllanthus amarus and Rauwolfia serpentina. National Medicinal Plants Board of India.


Unit – V

Herbal Cosmetology: Plant antioxidants - antioxidant vitamins (vitamin C and E) - Use of antioxidants in cosmetics. Application of herbs in the following herbal cosmetics: Herbal Shampoo, Herbal Hair Dye/ Herbal Hair Oil/Hair Cream/Hair Gel, Herbal Face Mask, Herbal Bath Oil. Current status of Herbal Cosmetic Industry in India, Problems and Future prospects of Herbal Cosmetic Industry in India. Estimation of vitamin C from given herb - Study of SOD activity of the given plant material. Preparation of the following herbal products - Face mask, Bath oil, Hair wash powder.


Suggested Readings:


  1. Sharma, O.P. (2004) Economic Botany. TATA McGraw Hill Publication, New Delhi.

  2. Gokhale, S.B., Kokate, C.K. and Purohit, A.P. (2003) Pharmacognosy. Nirali Prakashan, Pune.

  3. Treas, G.E. and Evans, W.C. (2000) Pharmacognosy. ELBS Publication, London.

  4. Arumugam, K.R. and Murugesh, N. (1990) Text book of Pharmacognosy. Sathya Publishers, Chinnalapatti (Tamilnadu) – 624 201.

  5. Agarwal, S.S. and Paridhave, M. (2007) Herbal Drug Technology. University Press, New Delhi. Chaudhuri, A.B. (2007) Endangered Medicinal Plants. Daya Publishing House, New Delhi

  6. Biswas, P.K. (2006) Encyclopedia of Medicinal plants (Vol. I-VII). Dominant Publishers, New Delhi.

  7. Trivedi, P.C. (2006) Herbal Medicine: Traditional practices. Aarishkar Publishers, Jaipur.

  8. Bhattacharjee, S.K. (2004) Hand Book of Medicinal plants. Pointer Publishers, Jaipur. Anonymous, (2004) Cultivation of Selected Medicinal Plants. National Medicinal Plants Board, Govt. of India, New Delhi.Prajapathi, Purohit, Sharma and Kumar. (2003) A Hand book of Medicinal plants, Agrobios Publications, Jodhpur.

  9. John Jothi Prakash, E. (2003) Medicinal Botany and Pharmacognosy. JPR Publication, Vallioor, Tirunelveli.

  10. Varrier, P.S (2000) (Arya Vaidya Sala). Indian Medicinal plants: A compendium of 500 Species (Vol. I-V). Orient Longman.

  11. Anonymous, (1999) Pharmacognosy of Indigenous Drugs (Vol. I-III). Central Council for Research in Ayurvedha and Siddha, New Delhi. Harbourne, J. B. (1998) Phytochemical methods: A Guide to Modern Techniques of Plant Analysis (3rd edition). Chapman and Hill Co., New York.

  12. Nandkarni,K.M.(1998)Indian Materia Medica (Vol. I-III).Popular Prakasam,New Delhi.

  13. Handa, S. S. and V. K. Kapoor (1993) Pharmacognosy. Vallabh Prakashan. New Delhi.

  14. Raychaudri, S.P. (1991) Recent advances in Medicinal, Aromatic and Spice crops (Vol.I). Today & Tomorrow publication, New Delhi. Agarwal (1985) Drug plants in India. Kalyani Publishers, Ludhiyana.Dhavan, B.N. Ayurvedic Research on Medicinal plants in India. INSA, New Delhi.

  15. Sathyarathi, (1982) Indian Medicinal plants (Vol. I-III). ICMR, New Delhi.

  16. Chopra, R.N. (1980) Glossary of Indian Medicinal plants. CSIR, New Delhi.

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