Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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>ref|XP_635642.1| hypothetical protein DDB0188946 [Dictyostelium discoideum] gb|EAL62133.1| hypothetical protein DDB0188946 [Dictyostelium discoideum] Length = 745
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 7/146 (4%) Frame = +3
++ + +P + L +G F+ PI +L S+THLT S F D LP T+THLT +FN Sbjct: 468 SNTNTIPLSVQHLQVGKNFNQPINNLSSSITHLTWNSEFKLKEDQLPMTITHLTFGDNFN 527
+ LP S+T + G F+HP+ P SLT L G KFNK + LPPSLTHL L Sbjct: 528 KLVKGHLPNSITRIDFGNFFNHPIPKSYFPQSLTQLNLGYKFNKQIQPFVLPPSLTHLTL 587
+NQ + +LP SL +L++G F Sbjct: 588 SNDYNQNLLPGTLPQSLKYLSMGQSF 613 -------------- gnl|ti|818422028 name:POAA-aaa75c16.g1 mate_pair:818423044 (640 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_640564.1| leucine-rich repeat-containing protein (LR... 61 3e-008 ref|XP_647094.1| putative tyrosine kinase-like protein [Dic... 55 2e-006 ref|XP_635392.1| cyclic GMP-binding protein [Dictyostelium ... 55 2e-006 ref|NP_200660.1| ATP binding / kinase/ protein kinase/ prot... 54 3e-006 gb|AAF70839.1| F24O1.13 [Arabidopsis thaliana] 54 4e-006 ref|NP_176430.1| ATP binding / kinase/ protein kinase/ prot... 54 4e-006 ref|XP_549852.1| putative protein kinase [Oryza sativa (jap... 54 5e-006 ref|NP_200569.1| ATP binding / protein kinase/ protein seri... 52 1e-005 gb|ABA99175.1| Protein kinase domain, putative [Oryza sativ... 52 1e-005 ref|XP_647238.1| putative protein tyrosine kinase [Dictyost... 52 2e-005 >ref|XP_640564.1| leucine-rich repeat-containing protein (LRR) [Dictyostelium discoideum] gb|EAL66540.1| tyrosine kinase-like (TKL) protein [Dictyostelium discoideum] Length = 1288 Score = 60.8 bits (146), Expect = 3e-008 Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Frame = +1
K CG +APE+LA E+ T K YS+ I+LWEL TR IPY ++ ++VV I G Sbjct: 1005 KTMCGTTGWVAPEVLA-EEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRSIDRGE 1063
R P+P CPP + + + Sbjct: 1064 RLPMPAWCPPKYAALMNR 1081 Score = 41.2 bits (95), Expect = 0.026 Identities = 18/44 (40%), Positives = 26/44 (59%) Frame = +1 Query: 325 WELYTRQIPYTNEHPIRVVTKILCGYRPPIPVGCPPSLSQVKRK 456 WEL TR IPY ++ ++VV I G R P+P CPP + + + Sbjct: 1038 WELLTRLIPYAGKNTMQVVRSIDRGERLPMPAWCPPKYAALMNR 1081 Score = 38.5 bits (88), Expect = 0.17 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 503 WELYMRQIPYTNEHPIRVVTKILCGYRPPIPVGCPP 610 WEL R IPY ++ ++VV I G R P+P CPP Sbjct: 1038 WELLTRLIPYAGKNTMQVVRSIDRGERLPMPAWCPP 1073 ------------------------- gnl|ti|818423045 name:POAA-aaa75c18.b1 mate_pair:818422029 (407 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_330731.1| hypothetical protein [Neurospora crassa] >... 46 4e-004 ref|XP_362103.1| hypothetical protein MG04548.4 [Magnaporth... 46 5e-004 ref|XP_638380.1| hypothetical protein DDB0186166 [Dictyoste... 45 8e-004 emb|CAE57848.1| Hypothetical protein CBG00883 [Caenorhabdit... 44 0.001 ref|XP_638381.1| hypothetical protein DDB0218636 [Dictyoste... 43 0.004 ref|XP_638379.1| hypothetical protein DDB0186164 [Dictyoste... 43 0.004 ref|YP_372175.1| AMP-dependent synthetase and ligase [Burkh... 42 0.007 ref|XP_447677.1| unnamed protein product [Candida glabrata]... 42 0.007 gb|EAA74898.1| hypothetical protein FG11075.1 [Gibberella z... 42 0.007 ref|XP_759375.1| hypothetical protein UM03228.1 [Ustilago m... 41 0.011 >ref|XP_330731.1| hypothetical protein [Neurospora crassa] gb|EAA34985.1| hypothetical protein [Neurospora crassa] Length = 560
Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = +1
EVGELW+KGPNV Y + KE DG+F TG HI Sbjct: 392 EVGELWIKGPNVFKGYYKSPERTKEAFSEDGYFKTGDMFHI 432 ---------------- gnl|ti|818422030 name:POAA-aaa75c20.g1 mate_pair:818423046 (837 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_640564.1| leucine-rich repeat-containing protein (LR... 61 5e-008 ref|XP_647094.1| putative tyrosine kinase-like protein [Dic... 55 4e-006 ref|XP_635392.1| cyclic GMP-binding protein [Dictyostelium ... 55 4e-006 ref|NP_200660.1| ATP binding / kinase/ protein kinase/ prot... 54 5e-006 gb|AAF70839.1| F24O1.13 [Arabidopsis thaliana] 54 7e-006 ref|NP_176430.1| ATP binding / kinase/ protein kinase/ prot... 54 7e-006 ref|XP_549852.1| putative protein kinase [Oryza sativa (jap... 54 9e-006 ref|NP_200569.1| ATP binding / protein kinase/ protein seri... 52 2e-005 gb|ABA99175.1| Protein kinase domain, putative [Oryza sativ... 52 2e-005 ref|XP_647238.1| putative protein tyrosine kinase [Dictyost... 52 2e-005 >ref|XP_640564.1| leucine-rich repeat-containing protein (LRR) [Dictyostelium discoideum] gb|EAL66540.1| tyrosine kinase-like (TKL) protein [Dictyostelium discoideum] Length = 1288 Score = 60.8 bits (146), Expect = 5e-008 Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Frame = +2
K CG +APE+LA E+ T K YS+ I+LWEL TR IPY ++ ++VV I G Sbjct: 1005 KTMCGTTGWVAPEVLA-EEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRSIDRGE 1063
R P+P CPP + + + Sbjct: 1064 RLPMPAWCPPKYAALMNR 1081 Score = 41.2 bits (95), Expect = 0.044 Identities = 18/44 (40%), Positives = 26/44 (59%) Frame = +2 Query: 323 WELYTRQIPYTNEHPIRVVTKILCGYRPPIPVGCPPSLSQVKRK 454 WEL TR IPY ++ ++VV I G R P+P CPP + + + Sbjct: 1038 WELLTRLIPYAGKNTMQVVRSIDRGERLPMPAWCPPKYAALMNR 1081 Score = 38.5 bits (88), Expect = 0.28 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 501 WELYMRQIPYTNEHPIRVVTKILCGYRPPIPVGCPP 608 WEL R IPY ++ ++VV I G R P+P CPP Sbjct: 1038 WELLTRLIPYAGKNTMQVVRSIDRGERLPMPAWCPP 1073 --------
gnl|ti|818422038 name:POAA-aaa75e16.g1 mate_pair:818423054 (440 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAM75110.1| Aldo/keto reductase [Kineococcus radiotolera... 100 1e-020 ref|NP_822773.1| putative oxidoreductase [Streptomyces aver... 99 6e-020 ref|ZP_00566891.1| Aldo/keto reductase [Frankia sp. EAN1pec... 98 1e-019 ref|ZP_00463962.1| Aldo/keto reductase [Burkholderia cenoce... 97 2e-019 emb|CAD55277.1| putative aldo/keto reductase; putative oxid... 97 2e-019 ref|ZP_00279967.1| COG0667: Predicted oxidoreductases (rela... 96 3e-019 ref|ZP_00245680.1| COG0667: Predicted oxidoreductases (rela... 96 4e-019 ref|NP_883906.1| putative oxidoreductase [Bordetella parape... 96 5e-019 ref|NP_889637.1| putative oxidoreductase [Bordetella bronch... 96 5e-019 emb|CAB72221.1| putative oxidoreductase [Streptomyces coeli... 95 7e-019 >gb|EAM75110.1| Aldo/keto reductase [Kineococcus radiotolerans SRS30216] ref|ZP_00617155.1| Aldo/keto reductase [Kineococcus radiotolerans SRS30216] Length = 360
Identities = 50/94 (53%), Positives = 64/94 (68%) Frame = -2
G VRY+GASSM+AWQF+KALHL ++ +FVTMQ+HY+LLYREEEREM+PLC DEG Sbjct: 189 GKVRYLGASSMWAWQFAKALHLQELHGWTRFVTMQDHYNLLYREEEREMLPLCADEG--- 245
+GV+P+ PL RG L R++ Sbjct: 246 ----------------IGVIPWSPLARGKLTRDW 263 ---------- gnl|ti|818422079 name:POAA-aaa75m16.g1 mate_pair:818423092 (278 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_641606.1| hypothetical protein DDB0205993 [Dictyoste... 110 2e-023 gb|AAM89290.1| histone acetyltransferase protein HAC108 [Ze... 103 1e-021 gb|AAL33649.1| histone aceytl-transferase HAC108 [Zea mays] 103 1e-021 gb|AAM63720.1| embryogenic callus protein-like [Arabidopsis... 103 1e-021 dbj|BAC41804.1| putative embryogenic callus protein [Arabid... 103 1e-021 ref|NP_196536.1| chromatin binding / nucleic acid binding /... 103 1e-021 ref|XP_643810.1| hypothetical protein DDB0167422 [Dictyoste... 103 1e-021 dbj|BAA32822.1| 181 [Daucus carota] 103 1e-021 gb|AAQ24535.1| MYST-type acetyltransferase [Solanum chacoense] 103 2e-021 ref|NP_201266.1| chromatin binding / nucleic acid binding /... 102 4e-021 >ref|XP_641606.1| hypothetical protein DDB0205993 [Dictyostelium discoideum] gb|EAL67624.1| hypothetical protein DDB0205993 [Dictyostelium discoideum] Length = 1361
Identities = 54/65 (83%), Positives = 61/65 (93%) Frame = +1
I+ +YELSKKE+KVGTPEKPLSDLGLLSFRSYWTQVLLEILRKHKGNLSI DIS MT+I+ Sbjct: 535 ISFSYELSKKESKVGTPEKPLSDLGLLSFRSYWTQVLLEILRKHKGNLSILDISNMTSIR 594
TE ++
Sbjct: 595 TEDVI 599 -------------- gnl|ti|818422089 name:POAA-aaa75o12.g1 mate_pair:818423100 (400 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_395824.1| PREDICTED: similar to transcription factor... 49 4e-005 emb|CAG10816.1| unnamed protein product [Tetraodon nigrovir... 49 5e-005 ref|XP_797175.1| PREDICTED: similar to CG5343-PA [Strongylo... 49 5e-005 gb|AAH74631.1| MGC69557 protein [Xenopus tropicalis] >gi|49... 48 1e-004 gb|AAT84373.1| transcription factor 2B [Bos taurus] >gi|739... 48 1e-004 gb|EAA14543.2| ENSANGP00000016579 [Anopheles gambiae str. P... 48 1e-004 ref|XP_511001.1| PREDICTED: hypothetical protein XP_511001 ... 48 1e-004 gb|AAH99768.1| Gtl3_predicted protein [Rattus norvegicus] 48 1e-004 ref|XP_797150.1| PREDICTED: similar to transcription factor... 48 1e-004 dbj|BAE43087.1| unnamed protein product [Mus musculus] 48 1e-004 >ref|XP_395824.1| PREDICTED: similar to transcription factor IIB [Apis mellifera] Length = 193 Score = 49.3 bits (116), Expect = 4e-005 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = +1
M++N FQSGFLSILYSIGSKPL+ W+ H I N + L + +L SN Sbjct: 1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEILGSNVSTTYIT 60
C Sbjct: 61 C 61 -------------- gnl|ti|820219402 name:POAA-aaa76b15.b1 mate_pair:818420479 (869 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_659220.1| hypothetical protein AN1616.2 [Aspergillus... 55 3e-006 ref|XP_363787.1| hypothetical protein MG01713.4 [Magnaporth... 52 3e-005 sp|Q01752|AAD_PHACH Aryl-alcohol dehydrogenase [NADP+] (AAD... 49 2e-004 ref|XP_662435.1| hypothetical protein AN4831.2 [Aspergillus... 48 4e-004 ref|XP_328429.1| hypothetical protein [Neurospora crassa] >... 48 4e-004 gb|EAA74573.1| hypothetical protein FG06217.1 [Gibberella z... 48 5e-004 ref|XP_682524.1| hypothetical protein AN9255.2 [Aspergillus... 47 7e-004 gb|AAW46848.1| Aryl-alcohol dehydrogenase, putative [Crypto... 47 7e-004 gb|EAL93420.1| aryl-alcohol dehydrogenase (AAD), putative [... 46 0.001 dbj|BAB83608.1| arylalcohol dehydrogenase [Coriolus versico... 45 0.002 >ref|XP_659220.1| hypothetical protein AN1616.2 [Aspergillus nidulans FGSC A4] gb|EAA64736.1| hypothetical protein AN1616.2 [Aspergillus nidulans FGSC A4] Length = 404
Identities = 22/34 (64%), Positives = 28/34 (82%) Frame = -1
+ EESE+WIGEW +K G R +MVIATKYTTG++ Sbjct: 75 YQQEESEKWIGEWLKKRGNRDQMVIATKYTTGFR 108 Score = 49.7 bits (117), Expect = 1e-004 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = -2 Query: 133 TDAIQANFTGNSRKSLHVSVELSLKKLKTDYIDIL 29 T+ +Q+NF GNS KS+ VSV+ SL+KL+TDYIDIL Sbjct: 114 TEPLQSNFVGNSFKSMRVSVDNSLRKLQTDYIDIL 148 --------------- gnl|ti|818420509 name:POAA-aaa76h21.g1 mate_pair:820219434 (903 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_646394.1| hypothetical protein DDB0190661 [Dictyoste... 58 4e-007 ref|XP_322750.1| hypothetical protein [Neurospora crassa] >... 46 0.002 ref|XP_361446.1| hypothetical protein MG03920.4 [Magnaporth... 42 0.038 ref|XP_414053.1| PREDICTED: hypothetical protein XP_414053 ... 41 0.050 ref|XP_453142.1| unnamed protein product [Kluyveromyces lac... 40 0.11 ref|NP_077282.2| fatty acid 2-hydroxylase [Homo sapiens] >g... 39 0.19 gb|AAH04263.2| Fatty acid 2-hydroxylase [Homo sapiens] >gi|... 39 0.19 gb|AAH84384.1| LOC398669 protein [Xenopus laevis] 38 0.55 gb|AAH54985.1| LOC398669 protein [Xenopus laevis] 38 0.55 ref|XP_595049.2| PREDICTED: similar to fatty acid 2-hydroxy... 36 1.6 >ref|XP_646394.1| hypothetical protein DDB0190661 [Dictyostelium discoideum] gb|EAL72304.1| hypothetical protein DDB0190661 [Dictyostelium discoideum] Length = 373 Score = 58.2 bits (139), Expect = 4e-007 Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Frame = -2
S+ +S+++ +S N + N+ + Q +++ G Y WIHSQ GL +I IFDN Sbjct: 128 SNKISYTSDNSIDEKILNSIDVNKAMVPQLKLLE----GKNYLKWIHSQTGLNKIIIFDN 183
LE F+R+PWWYIFI+ I Sbjct: 184 SILELFTRWPWWYIFILWI 202 Score = 53.5 bits (127), Expect = 1e-005 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 11/81 (13%) Frame = -3 Query: 358 SVLTRYF*WPPFIVFAL-----------NISFQHAGLIKTPIMFCYGALSWALIEYILHR 212 S+L + WP + +F L +I + + ++ + ++F G W+LIEYILHR Sbjct: 184 SILELFTRWPWWYIFILWIPIITACYIYSIIQEKSSVLVSTVIFFIGLFMWSLIEYILHR 243
FVFHL T+++W F+F I+ Sbjct: 244 FVFHL-ETSSYWGNFFHFFIH 263 ------------------ gnl|ti|820219445 name:POAA-aaa76j19.b1 (724 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAD37030.1| probable xanthine dehydrogenase [Neurospora... 53 1e-005 ref|XP_596585.2| PREDICTED: similar to aldehyde oxidase str... 51 4e-005 gb|EAA68516.1| hypothetical protein FG01561.1 [Gibberella z... 49 2e-004 ref|NP_000370.1| xanthine dehydrogenase [Homo sapiens] 47 5e-004 gb|AAB08399.1| xanthine dehydrogenase/oxidase [Homo sapiens... 47 5e-004 gb|AAA75287.1| xanthine dehydrogenase 47 5e-004 gb|AAT81740.1| xanthine dehydrogenase, putative [Oryza sati... 47 6e-004 gb|AAF97949.1| xanthine dehydrogenase [Felis catus] >gi|571... 47 6e-004 ref|NP_035853.2| xanthine dehydrogenase [Mus musculus] 47 8e-004 dbj|BAE26022.1| unnamed protein product [Mus musculus] 47 8e-004 >emb|CAD37030.1| probable xanthine dehydrogenase [Neurospora crassa] Length = 1364
Identities = 23/30 (76%), Positives = 24/30 (80%) Frame = -1
G TGTKL CGEGGCGACTV S F+PT NK Sbjct: 60 GLTGTKLGCGEGGCGACTVVVSQFNPTTNK 89 --------------- gnl|ti|820219456 name:POAA-aaa76l19.b1 (747 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00526554.1| AMP-dependent synthetase and ligase [Sol... 65 2e-009 gb|AAC24659.1| long chain fatty acid CoA ligase, putative [... 60 6e-008 gb|AAZ79469.1| 4-coumarate:coenzyme A ligase [Eucalyptus ca... 60 7e-008 gb|AAF91308.1| 4-coumarate:coA ligase 3 [Rubus idaeus] 60 1e-007 gb|AAC97599.1| 4-coumarate:CoA ligase isoenzyme 3 [Glycine ... 59 2e-007 dbj|BAD27987.1| putative 4-coumarate coenzyme A ligase [Ory... 58 3e-007 gb|ABA40922.1| 4-coumaroyl CoA ligase [Camellia sinensis] 58 3e-007 gb|AAK58909.1| 4-coumarate:CoA ligase 4 [Populus balsamifer... 57 5e-007 gb|AAF37733.1| 4-coumarate--CoA ligase 4CL2 [Lolium perenne] 57 5e-007 gb|AAY84731.1| 4-coumarate:CoA ligase [Populus tomentosa] 57 6e-007 >ref|ZP_00526554.1| AMP-dependent synthetase and ligase [Solibacter usitatus Ellin6076] gb|EAM54416.1| AMP-dependent synthetase and ligase [Solibacter usitatus Ellin6076] Length = 496 Score = 65.1 bits (157), Expect = 2e-009 Identities = 31/75 (41%), Positives = 49/75 (65%) Frame = +1
L + PD+PA++++TSGTT+ PKGV+H+HR+L + + + A+GP G+ L +LPL Sbjct: 139 LPPVDPDEPALLIYTSGTTARPKGVVHTHRSLYSTVVITVRAIGPRELEEGVALCVLPLM 198
H MG L +C+ Sbjct: 199 H-MGALAGLFSTVCL 212 ---------- gnl|ti|820219459 name:POAA-aaa76n01.b1 mate_pair:818420531 (678 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABA64469.1| DNA-dependent RNA polymerase II largest subu... 226 5e-058 ref|XP_641735.1| RNA polymerase II core subunit [Dictyostel... 224 2e-057 gb|AAC14137.1| RNA polymerase II largest subunit [Dictyoste... 224 2e-057 gb|AAQ08513.1| RNA polymerase II largest subunit [Pinus nigra] 215 1e-054 emb|CAA37130.1| RNA polymerase II [Arabidopsis thaliana] 214 2e-054 gb|AAQ08519.1| RNA polymerase II largest subunit [Psilotum ... 214 2e-054 gb|AAQ08514.1| RNA polymerase II largest subunit [Welwitsch... 213 4e-054 gb|AAQ08512.1| RNA polymerase II largest subunit [Cycas rev... 213 6e-054 gb|AAQ08511.1| RNA polymerase II largest subunit [Zamia mur... 211 1e-053 emb|CAA39916.1| RNA polymerase II large subunit [Schizosacc... 211 1e-053 >gb|ABA64469.1| DNA-dependent RNA polymerase II largest subunit [Glaucocystis nostochinearum] Length = 1852 Score = 226 bits (576), Expect = 5e-058 Identities = 116/163 (71%), Positives = 127/163 (77%) Frame = +1
RP + D+T RGEDDLTHKL+ I+K AN NLKRQE NGAPAHI Sbjct: 253 RPSIMMDSTARGEDDLTHKLADIVK------------------ANMNLKRQEMNGAPAHI 294
I+EF QLLQFH+ATYVDNE+PGQPQA QRSGRPLKS+ QRLKGKEGRIRGNLMGKRVDFS Sbjct: 295 ISEFQQLLQFHVATYVDNEIPGQPQACQRSGRPLKSISQRLKGKEGRIRGNLMGKRVDFS 354
ARTVITADPNL +DQ+G PRSIALNLTYPEIVT FN + L Sbjct: 355 ARTVITADPNLGIDQVGCPRSIALNLTYPEIVTKFNMPRMYEL 397 ------------- gnl|ti|818420531 name:POAA-aaa76n01.g1 mate_pair:820219459 (562 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_641735.1| RNA polymerase II core subunit [Dictyostel... 162 6e-039 gb|AAB24966.1| RNA polymerase II largest subunit [Dictyoste... 161 1e-038 emb|CAA37130.1| RNA polymerase II [Arabidopsis thaliana] 159 4e-038 emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsis th... 159 4e-038 ref|NP_195305.1| NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); D... 159 4e-038 gb|ABA64469.1| DNA-dependent RNA polymerase II largest subu... 158 1e-037 gb|AAC18417.1| RNA polymerase II largest subunit [Acanthamo... 157 2e-037 emb|CAA36736.1| DNA-directed RNA polymerase [Glycine max] 154 2e-036 ref|XP_493925.1| similar to Arabidopsis thaliana DNA-direct... 153 3e-036 gb|AAR14962.1| RNA polymerase II largest subunit [Colossend... 150 3e-035 >ref|XP_641735.1| RNA polymerase II core subunit [Dictyostelium discoideum] gb|EAL67745.1| RNA polymerase II largest subunit [Dictyostelium discoideum] Length = 1727 Score = 162 bits (410), Expect = 6e-039 Identities = 83/143 (58%), Positives = 105/143 (73%) Frame = -1
+Y GVS K GVPR K + + ++VKTPSL +YLK H +RD + AK V+ +LE+TT Sbjct: 1104 HYAGVSSKNV-TLGVPRLKEIINIA-KQVKTPSLTIYLKPHMARDMDRAKIVKSQLEYTT 1161
L VT+ATEIYYDPDPQ T+I ED E V SY E+PDEE+++ MSPWLLRIELDRGM+TD Sbjct: 1162 LANVTSATEIYYDPDPQNTIISEDAEFVNSYFELPDEEIDVHSMSPWLLRIELDRGMVTD 1221
KKLTMADI + ++G L+ I Sbjct: 1222 KKLTMADITQCVVRDFGLSLNCI 1244 --------------- gnl|ti|818420171 name:POAA-aaa77d24.g1 (637 letters) Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00775390.1| Aldehyde dehydrogenase [Pseudoalteromona... 65 2e-009 ref|ZP_00280675.1| COG1012: NAD-dependent aldehyde dehydrog... 62 1e-008 ref|XP_646482.1| aldehyde dehydrogenase [Dictyostelium disc... 61 2e-008 ref|ZP_00685702.1| Aldehyde dehydrogenase [Burkholderia amb... 61 2e-008 ref|YP_373066.1| Aldehyde dehydrogenase [Burkholderia sp. 3... 60 7e-008 ref|ZP_00424388.1| Aldehyde dehydrogenase [Burkholderia vie... 59 1e-007 ref|ZP_00462718.1| Aldehyde dehydrogenase [Burkholderia cen... 57 5e-007 ref|ZP_00502183.1| COG1012: NAD-dependent aldehyde dehydrog... 57 6e-007 ref|ZP_00449016.1| COG1012: NAD-dependent aldehyde dehydrog... 55 1e-006 ref|ZP_00579702.1| Aldehyde dehydrogenase [Sphingopyxis ala... 54 4e-006 >ref|ZP_00775390.1| Aldehyde dehydrogenase [Pseudoalteromonas atlantica T6c] gb|EAO68091.1| Aldehyde dehydrogenase [Pseudoalteromonas atlantica T6c] Length = 476 Score = 64.7 bits (156), Expect = 2e-009 Identities = 39/93 (41%), Positives = 49/93 (52%) Frame = -2
AT A +A AEVI+KAID+ KA P + + Y+R+ IL + Sbjct: 32 ATYAALADAEVIDKAIDAAEKAQPLLNKMAPYERQAILN----------------HCVKR 75
+ER DE A ALCIEAGKPI DA E+ R T Sbjct: 76 FEERFDELAHALCIEAGKPIKDARGEVTRLIDT 108 --------------------- gnl|ti|818420186 name:POAA-aaa77h18.g1 mate_pair:820220704 (705 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_001028827.1| dynein, axonemal, heavy polypeptide 1 [... 59 1e-007 gb|AAA63589.1| dynein heavy chain isotype 6 56 1e-006 emb|CAJ03160.1| dynein heavy chain, putative [Leishmania ma... 55 2e-006 Yüklə 3,49 Mb. Dostları ilə paylaş:
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