Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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++KAHF HSQFI+V LKEGMF+NANV+F+TKFVDGVSTV+RT+P+K Sbjct: 1128 MIKAHFPHSQFIVVSLKEGMFNNANVIFRTKFVDGVSTVTRTVPSK 1173 -------------- gnl|ti|820218035 name:POAA-aaa91a09.g1 mate_pair:818413134 (888 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||S13641 H+-transporting two-sector ATPase (EC 3.6.3.14)... 124 3e-027 prf||1705291A ATP synthetase alpha 124 3e-027 gb|AAD11834.1| H(+)-transporting ATPase, subunit 1 [Acantha... 81 4e-014 gb|AAU00622.1| ATP synthase F1 subunit alpha [Polysphondyli... 80 9e-014 gb|AAM93510.1| ATP synthase alpha subunit [Rickettsia slovaca] 63 1e-008 ref|YP_287451.1| ATP synthase alpha chain [Mycoplasma hyopn... 62 2e-008 ref|YP_278852.1| ATP synthase alpha chain [Mycoplasma hyopn... 62 2e-008 gb|AAN74336.1| ATP synthase F1 alpha subunit [Helicobacter ... 62 3e-008 ref|ZP_00370729.1| ATP synthase F1, alpha subunit [Campylob... 62 3e-008 ref|YP_191725.1| ATP synthase alpha chain [Gluconobacter ox... 57 9e-007 >pir||S13641 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain - slime mold (Physarum polycephalum) mitochondrion gb|AAA72817.1| ATP synthase alpha subunit (EC 3.6.1.34) Length = 528
Identities = 110/257 (42%), Positives = 139/257 (54%), Gaps = 12/257 (4%) Frame = -3
RALNT K P L+ DGIGN + + F ERKAPGVI + + Sbjct: 92 RALNTLVKTPVGYGLLGRVVDGIGNFIDGGETIAFEEYLNVERKAPGVITRESVTEPMLT 151
VDSMLP+ +G L++ +R DTILNQRYT ++ + L CV +K Sbjct: 152 GYKIVDSMLPIG--RGQRELIVGDRQTGKTTIAIDTILNQRYTNEEDIDLYCVYVGIGQK 209
K LNIQT + K + Y AAQSASLQFIAPYTGCA+ F + LIIYD Sbjct: 210 KSSILNIQTLLQNNKAAHYTTIVAATAAQSASLQFIAPYTGCAIAEFYRDQGEHALIIYD 269
DLTKHAAAY L ++ P +FPGDVF + ++ + TNFGGGSLT + + Sbjct: 270 DLTKHAAAYRQLSLLLRRPLGREAFPGDVFYAHSRLLERACKLNTNFGGGSLTALPIVET 329
+ + Y PTNIISIT Sbjct: 330 QAGDLSGYIPTNIISIT 346 --------------------- gnl|ti|818413154 name:POAA-aaa91c07.b1 mate_pair:820218055 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 336 6e-091 ------------- nl|ti|820218055 name:POAA-aaa91c07.g1 mate_pair:818413154 (886 letters) Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 179 1e-043 pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 146 1e-033 --------- gnl|ti|818413155 name:POAA-aaa91c08.b1 mate_pair:820218056 (913 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|YP_324997.1| Serine/Threonine protein kinase and Signal... 122 1e-026 dbj|BAB72857.1| serine/threonine kinase with two-component ... 120 7e-026 ref|ZP_00108772.1| COG3899: Predicted ATPase [Nostoc puncti... 112 2e-023 ref|ZP_00675403.1| Protein kinase:Guanylate cyclase:GAF [Tr... 111 4e-023 dbj|BAB72667.1| serine/threonine kinase with two-component ... 110 7e-023 gb|AAT41907.1| putative two component sensor serine/threoni... 108 2e-022 ref|ZP_00671612.1| Protein kinase:GAF [Trichodesmium erythr... 108 3e-022 ref|YP_002258.1| serine/threonine kinase with GAF domain [L... 107 4e-022 ref|NP_711603.1| Serine/threonine protein kinases [Leptospi... 107 4e-022 ref|ZP_00107064.1| COG3899: Predicted ATPase [Nostoc puncti... 104 4e-021 >ref|YP_324997.1| Serine/Threonine protein kinase and Signal Transduction Histidine Kinase (STHK) with GAF sensor [Anabaena variabilis ATCC 29413]
gb|ABA24102.1| Serine/Threonine protein kinase and Signal Transduction Histidine Kinase (STHK) with GAF sensor [Anabaena variabilis ATCC 29413] ref|ZP_00162518.1| COG3899: Predicted ATPase [Anabaena variabilis ATCC 29413] Length = 1795 Score = 122 bits (307), Expect = 1e-026 Identities = 67/177 (37%), Positives = 109/177 (61%) Frame = -2
+ ++F HDR QQAAY LIP+ ++ A LRIG+ +L HTP E++ + DIV N G A Sbjct: 690 ISYKFFHDRVQQAAYSLIPQEQKTATHLRIGQLLLTHTPETELENRIFDIVNQLNVGVAY 749
+ + E Q+++ LNL AG+KAK+ TAY AV Y++ A ++LL+E +W+ Y+L+ Sbjct: 750 LTDQPEKQRLLELNLMAGRKAKVATAYVVAVDYLNTA---IKLLEE----DSWQNQYELT 802
+S++ L E YL++ F ++L + E L + K + ++ K I+ Y AQ+K + Sbjct: 803 LSLYDLVAETEYLNTNFPTSELLVREILVNAK--HTLDKIKAYEIQIQAYTAQNKLI 857 --------------- gnl|ti|820218062 name:POAA-aaa91d02.g1 mate_pair:818413161 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAY00026.1| SA1_PKSB [uncultured bacterial symbiont of D... 58 4e-007 gb|AAY00025.1| SA1_PKSA [uncultured bacterial symbiont of D... 58 5e-007 gb|AAY00027.1| SA1_PKSC [uncultured bacterial symbiont of D... 56 2e-006 gb|ABA29781.1| MmxC [Cystobacter fuscus] 53 2e-005 gb|AAO64404.1| NdaC [Nodularia spumigena] 52 2e-005 emb|CAD29795.1| peptide synthetase [Planktothrix agardhii] 52 4e-005 ref|XP_793564.1| PREDICTED: similar to fatty acid synthase ... 51 6e-005 gb|AAK83194.1| polyketide synthase [Streptomyces viridochro... 50 1e-004 emb|CAD89777.1| MelF protein [Melittangium lichenicola] 50 1e-004 emb|CAD89775.1| MelD protein [Melittangium lichenicola] 50 1e-004 >gb|AAY00026.1| SA1_PKSB [uncultured bacterial symbiont of Discodermia dissoluta] Length = 7533
Identities = 25/51 (49%), Positives = 36/51 (70%) Frame = -2
++F GQGSQW G G LY++EP+ R+V+D+ D EL G+SL ++M G G Sbjct: 581 FVFTGQGSQWPGMGRELYESEPMARAVLDRCDEVIRELRGESLLDVMFGCG 631 Score = 52.0 bits (123), Expect = 3e-005 Identities = 24/47 (51%), Positives = 30/47 (63%) Frame = -2 Query: 317 FPGQGSQWQGCGVFLYQTEPVFRSVVDKIDSYFSELSGKSLKEIMLG 177 F GQGSQW G G LY+TEPV + V+D+ D E G SL ++M G Sbjct: 5793 FTGQGSQWAGMGQALYRTEPVVQGVLDQCDRLIRERRGVSLLDVMFG 5839 Score = 48.9 bits (115), Expect = 2e-004 Identities = 23/49 (46%), Positives = 30/49 (61%) Frame = -2 Query: 323 WIFPGQGSQWQGCGVFLYQTEPVFRSVVDKIDSYFSELSGKSLKEIMLG 177 ++F GQGSQ G G LY EP RSV+D+ D +L G SL ++M G Sbjct: 3183 FLFSGQGSQRSGMGKELYYAEPAVRSVLDRCDHVMRDLRGSSLLDVMFG 3231 ------------------ gnl|ti|818413164 name:POAA-aaa91d05.b1 mate_pair:820218065 (909 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||A57036 talin - slime mold (Dictyostelium discoideum) 48 4e-004 ref|XP_635646.1| filopodin [Dictyostelium discoideum] >gi|6... 48 4e-004 gb|AAC46586.2| filopodin [Dictyostelium discoideum] >gi|182... 48 4e-004 gb|AAC47842.1| CG2 [Plasmodium falciparum] 38 0.43 gb|AAC47854.1| CG2 [Plasmodium falciparum] 38 0.43 gb|AAC47853.1| CG2 [Plasmodium falciparum] 38 0.43 ref|XP_637174.1| hypothetical protein DDB0191526 [Dictyoste... 37 1.2 ref|XP_635971.1| hypothetical protein DDB0219501 [Dictyoste... 37 1.2 dbj|BAA75511.1| talin homologue [Dictyostelium discoideum] 37 1.2 ref|XP_637630.1| hypothetical protein DDB0218860 [Dictyoste... 36 1.6 >pir||A57036 talin - slime mold (Dictyostelium discoideum) Length = 2491
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%) Frame = -2
MS++LKI + +KT+RF P+M + E C IFEKTNEG Sbjct: 1 MSISLKINIVGANTVKTLRFAPDMCIQECCTHIFEKTNEG 40 --------------- gnl|ti|818413175 name:POAA-aaa91e04.b1 mate_pair:820218076 (906 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 9e-009 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 2e-006 gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005 ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 46 0.002 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.005 gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282
Identities = 32/36 (88%), Positives = 34/36 (94%) Frame = +1
VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114 Score = 39.7 bits (91), Expect = 0.15 Identities = 26/51 (50%), Positives = 27/51 (52%) Frame = +2 Query: 185 SAYTIGLNHWFLSY*SDLLSGHTAAPKRLLVVK*EGKTNLSHDGLNPAHVP 337 SA T N FLSY +LL H GKTNLSHDGL PAHVP Sbjct: 34 SAMTNCANQRFLSYYVELLLRHCHQ---------WGKTNLSHDGLIPAHVP 75 ---------------------- gnl|ti|820218076 name:POAA-aaa91e04.g1 mate_pair:818413175 (892 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX30301.1| unknown [Schistosoma japonicum] 87 8e-016 ref|XP_453849.1| unnamed protein product [Kluyveromyces lac... 86 2e-015 dbj|BAD26579.1| cytochrome P450 like_TBP [Citrullus lanatus] 74 9e-012 gb|AAX27748.1| unknown [Schistosoma japonicum] 69 3e-010 emb|CAB51041.1| putative transcription factor [Periplaneta ... 65 2e-009 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 64 7e-009 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 62 2e-008 dbj|BAD18905.1| rRNA intron-encoded endonuclease [Thermopro... 45 0.003 dbj|BAD18906.1| rRNA intron-encoded endonuclease [Thermopro... 43 0.013 ref|XP_767406.1| hypothetical protein GLP_748_1200_211 [Gia... 43 0.017 >gb|AAX30301.1| unknown [Schistosoma japonicum] Length = 55
Identities = 40/44 (90%), Positives = 41/44 (93%) Frame = +3
LI DAHEW+NEIPTVPTYYLAKPQPRERAW N RGKKTLLSLTL Sbjct: 5 LISDAHEWMNEIPTVPTYYLAKPQPRERAWRNQRGKKTLLSLTL 48 -------------------- PP26_Resultat
mate_pair:820218095 (905 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 --------------- nl|ti|820218095 name:POAA-aaa91g01.g1 mate_pair:818413192 (890 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 258 1e-067 -------------------- gnl|ti|820218112 name:POAA-aaa91h07.g1 mate_pair:818413209 (676 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAH75979.1| Zgc:92275 [Danio rerio] >gi|50540290|ref|NP_... 47 5e-004 emb|CAF90728.1| unnamed protein product [Tetraodon nigrovir... 46 0.001 ref|XP_425346.1| PREDICTED: similar to Hypothetical protein... 44 0.005 ref|XP_797386.1| PREDICTED: similar to rieske [Strongylocen... 43 0.008 gb|EAA04927.2| ENSANGP00000016076 [Anopheles gambiae str. P... 42 0.017 gb|AAR37773.1| iron-sulfur cluster-binding protein, Rieske ... 41 0.039 gb|EAA46073.1| CG40050-PA.3 [Drosophila melanogaster] >gi|6... 40 0.086 emb|CAA98235.2| Hypothetical protein C12D8.5 [Caenorhabditi... 39 0.11 emb|CAE64763.1| Hypothetical protein CBG09553 [Caenorhabdit... 39 0.11 >gb|AAH75979.1| Zgc:92275 [Danio rerio] ref|NP_001002612.1| hypothetical protein LOC436885 [Danio rerio] Length = 460 Score = 47.0 bits (110), Expect = 5e-004 Identities = 19/27 (70%), Positives = 21/27 (77%) Frame = +3
DA+CP ANL VGG+VVG CI CPFH Sbjct: 161 DAYCPHLGANLAVGGRVVGGCIECPFH 187 ---------- gnl|ti|818411426 name:POAA-aaa92b05.b1 mate_pair:818411772 (898 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_636774.1| hypothetical protein DDB0187898 [Dictyoste... 86 2e-015 gb|AAK73914.3| Ubiquitin conjugating enzyme protein 3 [Caen... 73 1e-011 emb|CAE74417.1| Hypothetical protein CBG22149 [Caenorhabdit... 72 2e-011 ref|XP_638791.1| ubiquitin-conjugating enzyme [Dictyosteliu... 70 1e-010 ref|XP_651714.1| ubiquitin-conjugating enzyme, putative [En... 68 4e-010 gb|AAN11777.2| CG7656-PB, isoform B [Drosophila melanogaste... 67 6e-010 ref|XP_520535.1| PREDICTED: similar to ubiquitin-conjugatin... 67 1e-009 ref|XP_618072.2| PREDICTED: similar to ubiquitin-conjugatin... 67 1e-009 ref|XP_873214.1| PREDICTED: similar to cell division cycle ... 67 1e-009 ref|XP_423237.1| PREDICTED: similar to ubiquitin conjugatin... 67 1e-009 >ref|XP_636774.1| hypothetical protein DDB0187898 [Dictyostelium discoideum] gb|EAL63269.1| hypothetical protein DDB0187898 [Dictyostelium discoideum] Length = 517
Identities = 61/139 (43%), Positives = 76/139 (54%), Gaps = 12/139 (8%) Frame = +1
PS L S S SS SPS S S+S ++ T++ ++ L L+ + Sbjct: 27 PSPLYSSYSSTSSTSPSIS----SISHNNNNNNTINPKGPKDTCYEGGVFQLLLTFPKDY 82
P PPSL H Y+ GDD +SGEL ERWLPTQSVTTI+LSL Sbjct: 83 PMSPPSLRFLSDFWHPNVYIREGRVCISILHPPGDDILSGELPEERWLPTQSVTTIILSL 142
+S+L+DPNCSSPANVDASV Sbjct: 143 MSILSDPNCSSPANVDASV 161 ----------------------- gnl|ti|818411437 name:POAA-aaa92c04.b1 mate_pair:818411779 (919 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABA56511.1| chloramphenicol acetyltransferase [Salmonell... 95 4e-018 -------------------------- gnl|ti|818411779 name:POAA-aaa92c04.g1 mate_pair:818411437 (905 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 177 4e-043 --------------------------- gnl|ti|818411439 name:POAA-aaa92c06.b1 mate_pair:818411781 (913 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 242 1e-062 ------------- gnl|ti|818411781 name:POAA-aaa92c06.g1 mate_pair:818411439 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 127 7e-028 gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 119 1e-025 ref|ZP_00374729.1| conserved hypothetical protein [Wolbachi... 83 1e-014 pir||A53577 ascites sialoglycoprotein 1 - rat (fragments) 47 9e-004 gb|AAA85523.1| Heterodimeric complex composed of a mucin su... 47 9e-004 pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 44 0.006 gb|EAA20623.1| hypothetical protein [Plasmodium yoelii yoelii] 36 2.1 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 36 2.1 ref|NP_048116.1| ORF MSV045 hypothetical protein [Melanoplu... 34 6.0 >sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein Length = 84
Identities = 63/73 (86%), Positives = 66/73 (90%), Gaps = 1/73 (1%) Frame = -1
ALS NYRL + + HDLS LAAATGNRISRARYVGGATEFLKWWP+YGYTRRTVF ICAL Sbjct: 12 ALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTVFGICAL 71
LKPVTFGKRVGSS Sbjct: 72 LKPVTFGKRVGSS 84 -------------------- gnl|ti|818411782 name:POAA-aaa92c07.g1 mate_pair:818411440 (904 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 120 6e-026 sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 114 6e-024 ref|ZP_00374729.1| conserved hypothetical protein [Wolbachi... 80 7e-014 pir||A53577 ascites sialoglycoprotein 1 - rat (fragments) 45 0.003 gb|AAA85523.1| Heterodimeric complex composed of a mucin su... 45 0.003 ref|XP_875679.1| PREDICTED: similar to VPS10 domain recepto... 41 0.065 pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 37 0.94 emb|CAG01157.1| unnamed protein product [Tetraodon nigrovir... 37 1.2 dbj|BAD77932.1| class IV chitinase [Cryptomeria japonica] 36 2.1 ref|NP_862433.1| hypothetical lactococcin 972 immunity prot... 35 2.7 >gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] ref|NP_040359.1| hypothetical protein pColE1_04 [Plasmid ColE1] Length = 96
Identities = 60/66 (90%), Positives = 62/66 (93%) Frame = +2
+RSFFSARNLLLANKKTTAT+GGLFAGSRA NSFSEGNWLQQSADTKYC SSVAVV P L Sbjct: 1 MRSFFSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLL 60
QELCST
Sbjct: 61 QELCST 66 ----------- gnl|ti|818411801 name:POAA-aaa92e04.g1 mate_pair:818411459 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_422197.1| PREDICTED: similar to abnormal spindle [Ga... 55 2e-006 emb|CAH72552.1| asp (abnormal spindle)-like, microcephaly a... 55 4e-006 emb|CAH72550.1| asp (abnormal spindle)-like, microcephaly a... 55 4e-006 gb|AAS48532.1| abnormal spindle-like [Pongo pygmaeus] 55 4e-006 gb|AAS48530.1| abnormal spindle-like [Gorilla gorilla] >gi|... 55 4e-006 gb|AAS45486.1| abnormal spindle-like [Gorilla gorilla] 55 4e-006 gb|AAR84354.1| ASPM [Hylobates lar] >gi|60391787|sp|P62290|... 55 4e-006 gb|AAR84353.1| ASPM [Pongo pygmaeus] 55 4e-006 gb|AAR84352.1| ASPM [Gorilla gorilla] 55 4e-006 gb|AAR98744.1| ASPM [Ovis aries] >gi|60391794|sp|P62297|ASP... 55 4e-006 >ref|XP_422197.1| PREDICTED: similar to abnormal spindle [Gallus gallus] Length = 3025 Score = 55.5 bits (132), Expect = 2e-006 Identities = 27/46 (58%), Positives = 32/46 (69%) Frame = -3
V +Y++G EAL KF LKK LLLV LDRAK + L+ DPCLF K Sbjct: 827 VPHLYREGHEEALSKFTLKKLLLLVCFLDRAKQSRLIGHDPCLFCK 872 Score = 46.2 bits (108), Expect = 0.002 Identities = 24/51 (47%), Positives = 33/51 (64%) Frame = -1 Query: 216 FVQDSPVKSSAGMLLMFAKYYLSGEGDFVRRLVFLEYTVSVEQSEIDEFEF 64 F +D+ KSS +LL ++ +LSGEGD R L FL VS Q+ +DEF+F Sbjct: 870 FCKDAEFKSSKDILLAISRDFLSGEGDLSRHLGFLGLPVSHIQTPLDEFDF 920 --------------- gnl|ti|818411469 name:POAA-aaa92f03.b1 mate_pair:818411810 (909 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAD33945.1| putative serine carboxypeptidase precursor ... 58 4e-007 gb|AAD22150.1| serine-type carboxypeptidase [Sorghum bicolor] 56 2e-006 gb|AAD22164.1| serine carboxypeptidase [Sorghum bicolor] 55 3e-006 gb|AAD22151.1| serine carboxypeptidase-like protein [Sorghu... 55 3e-006 emb|CAB78333.1| SERINE CARBOXYPEPTIDASE I PRECURSOR-like pr... 55 3e-006 gb|AAN15500.1| serine carboxypeptidase 1 precursor-like pro... 55 3e-006 ref|NP_191906.1| SCPL40; catalytic/ serine carboxypeptidase... 55 3e-006 ref|NP_193027.2| SCPL20; serine carboxypeptidase [Arabidops... 55 3e-006 ref|XP_471833.1| OSJNBb0062H02.3 [Oryza sativa (japonica cu... 55 4e-006 ref|XP_466920.1| putative carboxypeptidase D [Oryza sativa ... 55 4e-006 >dbj|BAD33945.1| putative serine carboxypeptidase precursor [Oryza sativa (japonica cultivar-group)] Length = 502
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 1/43 (2%) Frame = +2
+FL WF +PE++ DFY++GESYGGHYVPQ+ TF +HL Sbjct: 211 VFLLNWFNRFPEYKGRDFYIAGESYGGHYVPQIATIVTFINHL 253 --------------- gnl|ti|820218124 name:POAA-aaa93a08.g1 (895 letters) Score E
Sequences producing significant alignments: (bits) Value ref|NP_921277.1| Transposase of Tn10 [Oryza sativa (japonic... 404 e-111 gb|AAN42135.1| iso-IS10R ORF [Shigella flexneri 2a str. 301... 404 e-111 ---------------- nl|ti|818415626 name:POAA-aaa93c07.b1 mate_pair:820218147 (886 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 484 e-135 ----------------- gnl|ti|820218147 name:POAA-aaa93c07.g1 mate_pair:818415626 (889 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 259 7e-068 ------------------- gnl|ti|818415633 name:POAA-aaa93d03.b1 mate_pair:820218155 (766 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAD56609.1| putative calmodulin-binding protein CaM-BP46... 69 2e-010 ref|XP_636873.1| putative calmodulin-binding protein CaM-BP... 69 2e-010 ref|XP_637259.1| hypothetical protein DDB0187441 [Dictyoste... 62 3e-008 ref|XP_638074.1| hypothetical protein DDB0218720 [Dictyoste... 60 6e-008 ref|YP_142524.1| unknown [Acanthamoeba polyphaga mimivirus]... 58 3e-007 gb|AAO51395.1| similar to Dictyostelium discoideum (Slime m... 58 4e-007 ref|XP_644717.1| hypothetical protein DDB0203029 [Dictyoste... 58 4e-007 ref|XP_647366.1| hypothetical protein DDB0189601 [Dictyoste... 55 2e-006 Yüklə 3,49 Mb. Dostları ilə paylaş:
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