Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|NP_075373.1| vacuolar protein sorting 35 [Mus musculus]... 73 1e-011 gb|AAH89195.1| Unknown (protein for MGC:98309) [Xenopus lae... 73 1e-011 ref|XP_792834.1| PREDICTED: similar to vacuolar protein sor... 73 1e-011 dbj|BAE25050.1| unnamed protein product [Mus musculus] 73 1e-011 dbj|BAE39047.1| unnamed protein product [Mus musculus] 73 1e-011 dbj|BAE39652.1| unnamed protein product [Mus musculus] 73 1e-011 ref|XP_214646.2| PREDICTED: maternal embryonic message 3 [R... 73 1e-011 >ref|XP_629242.1| hypothetical protein DDB0191828 [Dictyostelium discoideum AX4] gb|EAL60808.1| hypothetical protein DDB0191828 [Dictyostelium discoideum] Length = 781 Score = 93.6 bits (231), Expect = 8e-018 Identities = 45/93 (48%), Positives = 61/93 (65%) Frame = -2
+IY+ AR F +GGP RIRHT+ PLVF SLR + K+Q SG ++LD+ W IG K+F Sbjct: 510 KIYIIARGHFGKGGPHRIRHTLVPLVFCSLRFIRNFKQQVDSGVISLDENKWIAIGSKIF 569
F ETI +A IK ++ S R++LQA Q+ C Sbjct: 570 TFVSETIKALADIKLADLSFRLYLQALQTFDHC 602 ------------ gnl|ti|820217973 name:POAA-aab75d03.g1 (903 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_392348.1| PREDICTED: similar to CG8745-PA [Apis mell... 62 3e-008 ref|XP_414688.1| PREDICTED: similar to hypothetical protein... 60 8e-008 ref|XP_685311.1| PREDICTED: similar to CG8745-PA [Danio rer... 59 2e-007 gb|AAH91818.1| LOC553338 protein [Danio rerio] 59 2e-007 ref|ZP_00622130.1| Aminoglycoside phosphotransferase:Peptid... 59 3e-007 gb|AAH77219.1| MGC79033 protein [Xenopus laevis] 58 4e-007 ref|NP_082674.1| hypothetical protein LOC72947 [Mus musculu... 58 4e-007 emb|CAI35932.1| novel protein [Mus musculus] >gi|26352684|d... 58 4e-007 ref|XP_518143.1| PREDICTED: hypothetical protein XP_518143 ... 58 4e-007 dbj|BAE35872.1| unnamed protein product [Mus musculus] 58 4e-007 >ref|XP_392348.1| PREDICTED: similar to CG8745-PA [Apis mellifera] Length = 482
Identities = 29/55 (52%), Positives = 41/55 (74%) Frame = +1
+ SLLP+ + N GSEAN+LALRLA+T+T KD+IV+D AYHG+ ++ID+ Sbjct: 98 LTSLLPEPLSVCFLVNSGSEANDLALRLAQTYTNNKDMIVLDHAYHGHLTSMIDI 152 Score = 37.0 bits (84), Expect = 0.94 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +2 Query: 623 PYKFNGKGGTGKPDYVHIVCMTDTYRDPY 709 PYKFN G GK D+VH+ D YR Y Sbjct: 154 PYKFNHPNGPGKKDWVHVAPCPDVYRGKY 182 --------------------- gnl|ti|818413103 name:POAA-aab75f03.b1 mate_pair:820217996 (885 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_629427.1| beta glucosidase [Dictyostelium discoideum... 52 3e-005 gb|AAA74233.1| beta-glucosidase 52 3e-005 ref|YP_269083.1| xylosidase/arabinosidase [Colwellia psychr... 37 0.70 ref|ZP_00309695.1| COG1472: Beta-glucosidase-related glycos... 37 0.91 gb|AAN36056.1| hypothetical protein PF11_0476 [Plasmodium f... 37 1.2 ref|NP_878384.1| putative membrane protein [Candidatus Bloc... 36 2.0 ref|ZP_00309691.1| COG1472: Beta-glucosidase-related glycos... 35 3.5 gb|EAA20053.1| Elongation factor Tu family, putative [Plasm... 35 4.5 ref|XP_810854.1| hypothetical protein Tc00.1047053505171.20... 34 5.9 >ref|XP_629427.1| beta glucosidase [Dictyostelium discoideum] gb|EAL60954.1| beta glucosidase [Dictyostelium discoideum] Length = 821
Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +2
T G+PW+FAPVLG+GVQPLW R+YET Sbjct: 216 TVAVGIPWVFAPVLGIGVQPLWSRIYET 243 ----------------- gnl|ti|820217996 name:POAA-aab75f03.g1 mate_pair:818413103 (919 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00309691.1| COG1472: Beta-glucosidase-related glycos... 50 1e-004 emb|CAF88302.1| unnamed protein product [Tetraodon nigrovir... 45 0.005 emb|CAG09786.1| unnamed protein product [Tetraodon nigrovir... 44 0.008 ref|YP_269083.1| xylosidase/arabinosidase [Colwellia psychr... 43 0.014 emb|CAF93838.1| unnamed protein product [Tetraodon nigrovir... 42 0.023 emb|CAG05849.1| unnamed protein product [Tetraodon nigrovir... 41 0.051 gb|AAQ96223.1| LRRGT00010 [Rattus norvegicus] 40 0.15 dbj|BAD92233.1| ST8 alpha-N-acetyl-neuraminide alpha-2,8-si... 40 0.15 ref|XP_629427.1| beta glucosidase [Dictyostelium discoideum... 40 0.15 ref|ZP_00308266.1| COG1472: Beta-glucosidase-related glycos... 39 0.20 >ref|ZP_00309691.1| COG1472: Beta-glucosidase-related glycosidases [Cytophaga hutchinsonii] Length = 758 Score = 49.7 bits (117), Expect = 1e-004 Identities = 22/37 (59%), Positives = 30/37 (81%) Frame = -2
VP+DYSFP YL +LV G+++ +RIDE+V RIL LK+ Sbjct: 342 VPNDYSFPKYLVELVKEGKVSMARIDEAVGRILTLKI 378 -------------------------- gnl|ti|820218006 name:POAA-aab75g02.g1 mate_pair:818413112 (906 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 9e-009 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 2e-006 gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005 ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 46 0.002 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.005 gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282
Identities = 32/36 (88%), Positives = 34/36 (94%) Frame = +3
VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114 Score = 39.7 bits (91), Expect = 0.15 Identities = 26/51 (50%), Positives = 27/51 (52%) Frame = +1 Query: 154 SAYTIGLNHWFLSY*SDLLSGHTAAPKRLLVVK*EGKTNLSHDGLNPAHVP 306 SA T N FLSY +LL H GKTNLSHDGL PAHVP Sbjct: 34 SAMTNCANQRFLSYYVELLLRHCHQ---------WGKTNLSHDGLIPAHVP 75 --------------------- gnl|ti|820218025 name:POAA-aab75h10.g1 mate_pair:818413129 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAE56248.1| Hypothetical protein CBG23887 [Caenorhabdit... 68 5e-010 emb|CAE75004.1| Hypothetical protein CBG22905 [Caenorhabdit... 67 1e-009 emb|CAE75007.1| Hypothetical protein CBG22908 [Caenorhabdit... 65 3e-009 emb|CAE72410.1| Hypothetical protein CBG19571 [Caenorhabdit... 64 7e-009 emb|CAE57169.1| Hypothetical protein CBG00003 [Caenorhabdit... 63 1e-008 emb|CAE56199.1| Hypothetical protein CBG23823 [Caenorhabdit... 62 4e-008 emb|CAE71690.1| Hypothetical protein CBG18665 [Caenorhabdit... 61 6e-008 emb|CAE71792.1| Hypothetical protein CBG18801 [Caenorhabdit... 57 9e-007 emb|CAE62988.1| Hypothetical protein CBG07216 [Caenorhabdit... 52 2e-005 emb|CAE65393.1| Hypothetical protein CBG10341 [Caenorhabdit... 50 1e-004 >emb|CAE56248.1| Hypothetical protein CBG23887 [Caenorhabditis briggsae] Length = 209
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 9/156 (5%) Frame = +1
N +IQ+FKNS+ S+IQ F N ++ +F N + F ++ Sbjct: 38 NSRIQEFKNSRIQEFKNSRIQE----FKNSRIQEFKNSRIQEF--ENSRIQEFKNSRIQE 91
+EF + + Q+FKNS+IQ+FKNS+IQ+FKNS+ FKNS+ Q+FKNS+IQ+F Sbjct: 92 FKNSRIQEFKNS---RIQEFKNSRIQEFKNSRIQEFKNSRIQEFKNSRIQEFKNSRIQEF 148
K + + + + + F + + ++ + + A+A Sbjct: 149 KNSRIQEFKNSRIQEFKNSKSIACISKYGSTIIALA 184 ----------------------------- gnl|ti|818411582 name:POAA-aab76a01.g1 (938 letters) Score E
Sequences producing significant alignments: (bits) Value dbj|BAE48148.1| histamine oxidase [Arthrobacter crystallopo... 60 1e-007 sp|Q59118|AMOH_ARTGO Histamine oxidase (Copper amine oxidas... 60 1e-007 gb|EAL97930.1| Amine oxidase (copper-containing) [Arthrobac... 59 2e-007 sp|P46881|PAOX_ARTGO Phenylethylamine oxidase precursor (Am... 59 3e-007 ref|ZP_00381234.1| COG3733: Cu2+-containing amine oxidase [... 59 3e-007 pdb|1UI7|B Chain B, Site-Directed Mutagenesis Of His433 Inv... 59 3e-007 ref|YP_118997.1| putative copper amine oxidase [Nocardia fa... 58 5e-007 pdb|2BT3|A Chain A, Agao In Complex With Ruthenium-C4-Wire ... 55 3e-006 pdb|1WMO|B Chain B, Crystal Structure Of Topaquinone-Contai... 55 3e-006 pdb|1UI8|B Chain B, Site-Directed Mutagenesis Of His592 Inv... 55 3e-006 >dbj|BAE48148.1| histamine oxidase [Arthrobacter crystallopoietes] Length = 725
Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = -2
RLVVSFFTTV NY+YGFYWY+YLDG++ FE Sbjct: 376 RLVVSFFTTVGNYDYGFYWYLYLDGTIEFE 405 ------------------- gnl|ti|818411596 name:POAA-aab76b03.g1 mate_pair:818411241 (902 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAT85286.1| MSI type nucleosome/chromatin assembly facto... 91 7e-017 gb|AAL33648.1| MSI type nucleosome/chromatin assembly facto... 89 3e-016 ref|NP_200631.1| MSI1 (MULTICOPY SUPRESSOR OF IRA1) [Arabid... 87 6e-016 sp|O22466|MSI1_LYCES WD-40 repeat protein MSI1 >gi|2394227|... 86 1e-015 gb|AAH67546.1| Rbb4l protein [Danio rerio] 86 2e-015 gb|AAH42283.1| Rbbp7-prov protein [Xenopus laevis] 86 2e-015 ref|XP_760907.1| hypothetical protein UM04760.1 [Ustilago m... 86 2e-015 ref|NP_997775.1| retinoblastoma binding protein 4, like [Da... 86 2e-015 gb|AAH64219.1| Retinoblastoma binding protein 7 [Xenopus tr... 86 2e-015 gb|AAH80146.1| Rbbp7-prov protein [Xenopus tropicalis] 86 2e-015 >gb|AAT85286.1| MSI type nucleosome/chromatin assembly factor C, putative [Oryza sativa (japonica cultivar-group)] Length = 615 Score = 90.5 bits (223), Expect = 7e-017 Identities = 45/70 (64%), Positives = 50/70 (71%), Gaps = 3/70 (4%) Frame = -1
EE E EE++INEEYKIWKKN PFLYDLV+THALEWPSLTV WLPD+ A K S Sbjct: 10 EEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRAEPAGKDHSVQK 69
HT+DN
Sbjct: 70 MVLGTHTSDN 79 ------------------------------ gnl|ti|818411253 name:POAA-aab76c04.b1 mate_pair:818411604 (900 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK21974.1| rRNA promoter binding protein [Rattus norveg... 67 6e-010 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 44 0.006 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 41 0.050 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 41 0.065 emb|CAH00931.1| unnamed protein product [Kluyveromyces lact... 38 0.55 emb|CAH00939.1| unnamed protein product [Kluyveromyces lact... 38 0.55 sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin) 38 0.55 emb|CAB60727.1| aczonin [Homo sapiens] 38 0.55 emb|CAB52874.1| SPCC830.01c [Schizosaccharomyces pombe] 37 0.94 ref|NP_588472.2| hypothetical protein SPCC1620.14c [Schizos... 37 0.94 >gb|AAK21974.1| rRNA promoter binding protein [Rattus norvegicus] ref|NP_671477.1| rRNA promoter binding protein [Rattus norvegicus] Length = 295 Score = 67.4 bits (163), Expect = 6e-010 Identities = 43/83 (51%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = -3
AS+ A PA L P+ TQP+EPILIPKLRIRLA+FPY PE HLGDLLRI Sbjct: 135 ASSSRGARPAPLRAPARPTQPLEPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRI--W 192
G +P F G R RT Sbjct: 193 VRPGARFTPSPPDFQGPARAHRT 215 ----------------------- gnl|ti|818411604 name:POAA-aab76c04.g1 mate_pair:818411253 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pis... 69 2e-010 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 69 3e-010 ref|XP_577589.1| PREDICTED: similar to LRRG00134 [Rattus no... 64 9e-009 ref|XP_648070.1| conserved hypothetical protein [Entamoeba ... 56 1e-006 gb|AAR25995.1| putative senescence-associated protein [Pyru... 54 1e-005 ref|XP_665229.1| senescence-associated protein [Cryptospori... 47 7e-004 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 47 0.001 gb|EAA18798.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.004 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.004 gb|EAA21327.1| putative senescence-associated protein [Plas... 44 0.010 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282
Identities = 32/36 (88%), Positives = 34/36 (94%) Frame = +3
VNNPTL EFCF+MIGRADIEGSKS+VAMNAW PQAS Sbjct: 79 VNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQAS 114 Score = 39.7 bits (91), Expect = 0.14 Identities = 26/51 (50%), Positives = 27/51 (52%) Frame = +1 Query: 412 SAYTIGLNHWFLSY*SDLLSGHTAAPKRLLVVK*EGKTNLSHDGLNPAHVP 564 SA T N FLSY +LL H GKTNLSHDGL PAHVP Sbjct: 34 SAMTNCANQRFLSYYVELLLRHCHQ---------WGKTNLSHDGLIPAHVP 75 ----------------- gnl|ti|818411618 name:POAA-aab76d07.g1 mate_pair:818411268 (948 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] >gi|9507257|ref|... 100 1e-019 ref|ZP_00374729.1| conserved hypothetical protein [Wolbachi... 72 4e-011 sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 52 2e-005 emb|CAC84371.1| hypothetical protein [Saimiriine herpesviru... 52 4e-005 gb|AAP32203.1| latency associated nuclear antigen [Saimirii... 52 4e-005 gb|AAX49607.1| RPGR [Felis catus] 50 1e-004 gb|AAX49611.1| RPGR [Ovis aries] 48 4e-004 ref|NP_848394.1| unknown [Choristoneura fumiferana MNPV] >g... 47 8e-004 ref|NP_632303.1| Membrane alanine aminopeptidase [Methanosa... 46 0.002 gb|AAW46230.1| hypothetical protein CNK02440 [Cryptococcus ... 46 0.002 >gb|AAB59124.1| 10.2 kd ORF [Plasmid ColE1] ref|NP_040359.1| hypothetical protein pColE1_04 [Plasmid ColE1] Length = 96 Score = 100 bits (248), Expect = 1e-019 Identities = 49/56 (87%), Positives = 53/56 (94%) Frame = +1
+RSFFSARNLLLA+KKTTAT+GGLFAGSRATNS SEGNWLQQSADT YC SSVAV+ Sbjct: 1 MRSFFSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVV 56 ----------------- PP44_Resultat gnl|ti|818411277 name:POAA-aab76e04.b1 mate_pair:818411626 (902 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAC69101.2| Hypothetical protein K07E3.4b [Caenorhabditi... 60 1e-007 gb|AAH45019.1| Mthfd1-prov protein [Xenopus laevis] 58 4e-007 gb|AAH75779.1| Methylenetetrahydrofolate dehydrogenase (NAD... 58 4e-007 gb|AAH45396.1| Methylenetetrahydrofolate dehydrogenase (NAD... 58 4e-007 gb|AAG22092.1| tetrahydrofolate synthase [Scyliorhinus tora... 58 4e-007 ref|NP_001008007.1| mthfd1-prov protein [Xenopus tropicalis... 58 5e-007 emb|CAH91870.1| hypothetical protein [Pongo pygmaeus] 57 9e-007 gb|AAH89800.1| Methylenetetrahydrofolate dehydrogenase (NAD... 57 9e-007 ref|XP_510001.1| PREDICTED: methylenetetrahydrofolate dehyd... 57 9e-007 dbj|BAE21884.1| unnamed protein product [Mus musculus] 57 9e-007 >gb|AAC69101.2| Hypothetical protein K07E3.4b [Caenorhabditis elegans] gb|AAC69104.1| Hypothetical protein K07E3.4a [Caenorhabditis elegans] ref|NP_509360.1| K07E3.4b [Caenorhabditis elegans] ref|NP_509361.1| K07E3.4a [Caenorhabditis elegans] Length = 640
Identities = 28/32 (87%), Positives = 30/32 (93%) Frame = -1
DKVALKLAGP+GFV+TEAGFGADIG EKFF I Sbjct: 355 DKVALKLAGPDGFVITEAGFGADIGMEKFFNI 386 ---------------- gnl|ti|818411626 name:POAA-aab76e04.g1 mate_pair:818411277 (885 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_635719.1| formate-dihydrofolate ligase [Dictyosteliu... 137 5e-031 gb|EAL19472.1| hypothetical protein CNBG4190 [Cryptococcus ... 133 7e-030 gb|AAW44462.1| folic acid and derivative metabolism-related... 133 7e-030 ref|XP_421409.1| PREDICTED: similar to Mthfd1-prov protein ... 130 5e-029 emb|CAG32567.1| hypothetical protein [Gallus gallus] 130 5e-029 ref|XP_759467.1| hypothetical protein UM03320.1 [Ustilago m... 129 1e-028 gb|AAH75779.1| Methylenetetrahydrofolate dehydrogenase (NAD... 128 3e-028 gb|AAH45396.1| Methylenetetrahydrofolate dehydrogenase (NAD... 128 3e-028 ref|XP_702041.1| PREDICTED: hypothetical protein XP_696949 ... 128 3e-028 ref|XP_880997.1| PREDICTED: similar to C-1-tetrahydrofolate... 126 9e-028 >ref|XP_635719.1| formate-dihydrofolate ligase [Dictyostelium discoideum] gb|EAL62214.1| formate-dihydrofolate ligase [Dictyostelium discoideum] Length = 638
Identities = 71/118 (60%), Positives = 84/118 (71%) Frame = +1
+A S PI IAK+ G+ +EE++ YGKYKAKV+L +++RLK++ +G Sbjct: 21 IASSVEPLPIKTIAKSIGLLEEEIDFYGKYKAKVSLEVIERLKETENGN----------- 69
YVVVTGINPTPLGEGKSTTTIGL QALG HLGKK FACIRQPSQGPTFGIK Sbjct: 70 -------YVVVTGINPTPLGEGKSTTTIGLCQALGAHLGKKTFACIRQPSQGPTFGIK 120 ------------------- gnl|ti|818411301 name:POAA-aab76g04.b1 mate_pair:818411649 (905 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_001014203.1| hypothetical protein LOC362191 [Rattus ... 57 9e-007 ref|NP_079951.1| hypothetical protein LOC66632 [Mus musculu... 56 1e-006 dbj|BAE26651.1| unnamed protein product [Mus musculus] 56 1e-006 gb|AAH08485.2| MGC14798 protein [Homo sapiens] 56 2e-006 emb|CAB54820.1| SPBC577.12 [Schizosaccharomyces pombe] >gi|... 56 2e-006 ref|NP_542381.1| hypothetical protein LOC89978 [Homo sapien... 56 2e-006 ref|XP_510288.1| PREDICTED: similar to hypothetical protein... 56 2e-006 ref|XP_544605.2| PREDICTED: similar to CG1578-PA [Canis fam... 56 2e-006 gb|AAM50258.1| LD28359p [Drosophila melanogaster] >gi|60678... 55 4e-006 emb|CAG10390.1| unnamed protein product [Tetraodon nigrovir... 55 4e-006 >ref|NP_001014203.1| hypothetical protein LOC362191 [Rattus norvegicus] gb|AAH87148.1| Hypothetical LOC362191 [Rattus norvegicus] Length = 267 Score = 57.0 bits (136), Expect = 9e-007 Identities = 24/33 (72%), Positives = 30/33 (90%) Frame = +3 Query: 111 SKQYELNVCGEGGEYESFVLDCPLFKKRIVMYT 209 SK+Y ++VCGEGGEYE+F LDCPLFKK+IV+ T Sbjct: 191 SKKYGVHVCGEGGEYETFTLDCPLFKKKIVVDT 223 Score = 38.1 bits (87), Expect = 0.42 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +1 Query: 391 DQTETIIHSNDAFATVAFLRIQKWHLENK 477 D +E +IHS DAFA VA+LR+ HLE K Sbjct: 222 DTSEAVIHSADAFAPVAYLRLSGLHLEEK 250 -------------------- gnl|ti|818413304 name:POAA-aab77b09.b1 mate_pair:818413627 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABB17069.1| chloramphenicol acetyl transferase [Moss gen... 314 2e-084 ------------------- gnl|ti|818413627 name:POAA-aab77b09.g1 mate_pair:818413304 (911 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 157 5e-037 ------------------- gnl|ti|818413629 name:POAA-aab77b11.g1 mate_pair:818413306 (910 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_629349.1| pyruvate dehydrogenase E1 subunit alpha [D... 64 6e-009 ref|YP_067215.1| Pyruvate decarboxylase. [Rickettsia typhi ... 57 1e-006 ref|NP_220646.1| PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA... 55 4e-006 ref|ZP_00620750.1| Pyruvate dehydrogenase (lipoamide) [Sili... 53 1e-005 gb|AAV95506.1| pyruvate dehydrogenase complex, E1 component... 52 2e-005 ref|ZP_00556282.1| Pyruvate dehydrogenase (lipoamide) [Jann... 52 2e-005 ref|YP_352546.1| Pyruvate dehydrogenase E1 component, alpha... 52 2e-005 ref|YP_060094.1| Pyruvate dehydrogenase E1 component alpha ... 52 4e-005 gb|AAZ51369.1| pyruvate dehydrogenase E1 component alpha su... 52 4e-005 ref|ZP_00628490.1| Pyruvate dehydrogenase (lipoamide) [Para... 52 4e-005 >ref|XP_629349.1| pyruvate dehydrogenase E1 subunit alpha [Dictyostelium discoideum] gb|EAL60849.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium discoideum] Length = 377
Identities = 30/67 (44%), Positives = 43/67 (64%) Frame = +1
++ + + K+ATED LAAI+ + E++ A E +P P ELFT+VY VP+RGVE Sbjct: 311 IRQIILDNKIATEDQLAAIEETVRDEMEKASEKAIAAPLPQARELFTNVYLQEVPVRGVE 370
VNS+ P
Sbjct: 371 FVNSFKP 377 --------------- gnl|ti|818413631 name:POAA-aab77c01.g1 (912 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAL84694.1| beta-1,3-glucanase precursor [Hypocrea virens] 102 2e-020 dbj|BAD67019.1| laminarinase [Trichoderma viride] 102 2e-020 gb|AAL84695.1| beta-1,3-glucanase precursor [Hypocrea virens] 92 3e-017 Yüklə 3,49 Mb. Dostları ilə paylaş:
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