Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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emb|CAD70430.1| probable GLUCAN ENDO-1, 3-BETA-GLUCOSIDASE ... 82 3e-014 ref|XP_324462.1| hypothetical protein [Neurospora crassa] >... 82 3e-014 emb|CAA58889.1| endo-1,3(4)-beta-glucanase [Hypocrea lixii]... 78 4e-013 gb|EAA75332.1| hypothetical protein FG11006.1 [Gibberella z... 62 3e-008 gb|EAL84484.1| exo-beta-1,3-glucanase, putative [Aspergillu... 41 0.066 ref|YP_332514.1| hypothetical protein BURPS1710b_1103 [Burk... 37 0.73 ref|XP_694356.1| PREDICTED: similar to SON DNA-binding prot... 36 1.6 >gb|AAL84694.1| beta-1,3-glucanase precursor [Hypocrea virens] Length = 759 Score = 102 bits (253), Expect = 2e-020 Identities = 44/57 (77%), Positives = 52/57 (91%) Frame = +3
+++ QNGIWHNGHQQA YK+IYFY+NT+GMLISGGNTIT+L+PTFDT GTGV NTG Sbjct: 223 RIENGQNGIWHNGHQQALYKSIYFYKNTIGMLISGGNTITLLNPTFDTVGTGVSNTG 279 Score = 70.1 bits (170), Expect = 1e-010 Identities = 34/50 (68%), Positives = 39/50 (78%) Frame = +1 Query: 565 GGSPWIAIVDANSINSGVTFVTTVYPSFLIENLHKDTNSDVAQISGRTGL 714 GGSP+I IVDA SINSGVTF TTVYPS +I+NL KDT SDV + G T + Sbjct: 279 GGSPFIGIVDAKSINSGVTFSTTVYPSIVIDNLTKDTTSDVVVLRGSTAV 328 ------------------ gnl|ti|818413641 name:POAA-aab77d04.g1 (486 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_697947.1| PREDICTED: similar to Bifunctional polynuc... 76 4e-013 emb|CAB11157.1| SPAC23C11.04c [Schizosaccharomyces pombe] >... 72 5e-012 ref|XP_791366.1| PREDICTED: similar to polynucleotide kinas... 70 3e-011 ref|XP_785301.1| PREDICTED: similar to polynucleotide kinas... 69 6e-011 ref|XP_640898.1| bifunctional polynucleotide phosphatase/ki... 68 1e-010 emb|CAG06446.1| unnamed protein product [Tetraodon nigrovir... 67 2e-010 gb|AAH57659.1| Pnkp protein [Mus musculus] >gi|50401169|sp|... 67 2e-010 dbj|BAE43066.1| unnamed protein product [Mus musculus] 67 2e-010 ref|YP_142823.1| polynucleotide phosphatase/kinase [Acantha... 67 2e-010 pdb|1YJ5|B Chain B, Molecular Architecture Of Mammalian Pol... 67 2e-010 >ref|XP_697947.1| PREDICTED: similar to Bifunctional polynucleotide phosphatase/kinase (Polynucleotide kinase-3-phosphatase) (DNA 5-kinase/3-phosphatase) [Danio rerio] Length = 332 Score = 76.3 bits (186), Expect = 4e-013 Identities = 34/63 (53%), Positives = 47/63 (74%) Frame = +1
SLTS KQE+I+ VGFP +GKST +T+++PKGY +VNRDT+ + + C A A++ GKS Sbjct: 206 SLTSTKQEIIVAVGFPGAGKSTFFQTHIIPKGYAYVNRDTMGSWQHCVSACERALKEGKS 265
V V
Sbjct: 266 VAV 268 ------------------ gnl|ti|818413665 name:POAA-aab77g01.g1 mate_pair:818413338 (435 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00764553.1| COG0277: FAD/FMN-containing dehydrogenas... 60 3e-008 gb|AAF81732.1| putative FAD-dependent oxygenase EncM [Strep... 59 7e-008 gb|EAN06713.1| FAD linked oxidase, N-terminal [Mesorhizobiu... 59 7e-008 ref|ZP_00691452.1| FAD linked oxidase, N-terminal [Rhodofer... 59 7e-008 gb|EAL94104.1| oxidoreductase [Aspergillus fumigatus Af293]... 58 9e-008 ref|NP_437782.1| putative oxidoreductase, oxygen dependent,... 58 1e-007 ref|NP_107295.1| probable oxidoreductase [Mesorhizobium lot... 58 1e-007 ref|YP_160879.1| probable FAD/FMN-containing oxidoreductase... 58 1e-007 ref|YP_295847.1| FAD linked oxidase, N-terminal [Ralstonia ... 57 2e-007 ref|ZP_00655652.1| FAD linked oxidase, N-terminal [Nocardio... 57 2e-007 >ref|ZP_00764553.1| COG0277: FAD/FMN-containing dehydrogenases [Vibrio sp. Ex25] Length = 461
Identities = 23/44 (52%), Positives = 34/44 (77%) Frame = +1
+G ++DN + A +VT +G L+AN+++N+DL W LRGG GNFGI Sbjct: 155 YGMTIDNLVSANVVTADGRQLLANETENADLFWALRGGGGNFGI 198 Score = 41.6 bits (96), Expect = 0.009 Identities = 14/35 (40%), Positives = 26/35 (74%) Frame = +2 Query: 44 FGFSVDNFLEAELVTCNGEVLIANDSQNSDLMWGI 148 +G ++DN + A +VT +G L+AN+++N+DL W + Sbjct: 155 YGMTIDNLVSANVVTADGRQLLANETENADLFWAL 189 ------------- gnl|ti|820221910 name:POAA-aab90d01.b1 mate_pair:820222500 (913 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAC02631.1| ORF [Saccharomyces paradoxus] 57 9e-007 gb|AAL55241.1| polyprotein [Anopheles gambiae] 55 3e-006 gb|AAL75483.1| putative pol protein [Zea mays] 55 4e-006 gb|AAS56696.1| YCL075W [Saccharomyces cerevisiae] >gi|14041... 54 6e-006 ref|XP_471366.1| OSJNBb0052B05.12 [Oryza sativa (japonica c... 54 8e-006 gb|AAF20282.1| gag-pol polyprotein [Vitis vinifera] 54 8e-006 dbj|BAA97536.1| retroelement pol polyprotein-like [Arabidop... 54 1e-005 gb|AAF19226.1| Highly similar to Ta1-3 polyprotein [Arabido... 54 1e-005 pir||S00954 pol polyprotein - fruit fly (Drosophila melanog... 54 1e-005 ref|XP_468886.1| putative copia-type pol polyprotein [Oryza... 53 1e-005 >gb|AAC02631.1| ORF [Saccharomyces paradoxus] Length = 1626
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Frame = +1
S+DWI D+GCTSHMC+++++F ++ + G P++G GTV I Sbjct: 320 SSDWICDTGCTSHMCHDRSMFSSFTRSSKKDFVRGVGGSIPIMGSGTV--------NIGT 371
+ L + VP LPVNL+S KL K Sbjct: 372 VQLNDVSYVPDLPVNLISIWKLCAK 396 ---------------- gnl|ti|820221911 name:POAA-aab90d03.b1 mate_pair:820222501 (918 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX30301.1| unknown [Schistosoma japonicum] 87 8e-016 emb|CAH00945.1| unnamed protein product [Kluyveromyces lact... 86 2e-015 gb|AAX27748.1| unknown [Schistosoma japonicum] 69 3e-010 emb|CAB51041.1| putative transcription factor [Periplaneta ... 65 3e-009 dbj|BAD26579.1| cytochrome P450 like_TBP [Citrullus lanatus] 62 2e-008 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 52 3e-005 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 50 8e-005 dbj|BAD18905.1| rRNA intron-encoded endonuclease [Thermopro... 49 3e-004 dbj|BAD18906.1| rRNA intron-encoded endonuclease [Thermopro... 46 0.002 dbj|BAB33421.1| putative senescence-associated protein [Pis... 46 0.002 >gb|AAX30301.1| unknown [Schistosoma japonicum] Length = 55
Identities = 40/44 (90%), Positives = 41/44 (93%) Frame = -1
LI DAHEW+NEIPTVPTYYLAKPQPRERAW N RGKKTLLSLTL Sbjct: 5 LISDAHEWMNEIPTVPTYYLAKPQPRERAWRNQRGKKTLLSLTL 48 ---------------- gnl|ti|820221931 name:POAA-aab90f02.b1 mate_pair:820222522 (905 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 466 e-130 ----------- gnl|ti|820222014 name:POAA-aab91f03.b1 mate_pair:820222605 (918 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_636095.1| hypothetical protein DDB0188558 [Dictyoste... 57 7e-007 ref|XP_415570.1| PREDICTED: similar to quiescent cell proli... 54 6e-006 gb|AAH76507.1| Zgc:91816 [Danio rerio] >gi|50540452|ref|NP_... 52 3e-005 ref|NP_114179.1| dipeptidylpeptidase 7 [Rattus norvegicus] ... 52 3e-005 ref|NP_114031.2| dipeptidylpeptidase 7 [Mus musculus] >gi|2... 52 4e-005 gb|AAG01154.1| quiescent cell proline dipeptidase precursor... 52 4e-005 gb|AAW26619.1| SJCHGC02147 protein [Schistosoma japonicum] 51 5e-005 gb|EAA04920.2| ENSANGP00000018571 [Anopheles gambiae str. P... 51 5e-005 ref|XP_508669.1| PREDICTED: similar to Lysosomal Pro-X carb... 51 5e-005 emb|CAH90763.1| hypothetical protein [Pongo pygmaeus] >gi|6... 51 5e-005 >ref|XP_636095.1| hypothetical protein DDB0188558 [Dictyostelium discoideum] gb|EAL62586.1| hypothetical protein DDB0188558 [Dictyostelium discoideum] Length = 513 Score = 57.4 bits (137), Expect = 7e-007 Identities = 26/38 (68%), Positives = 30/38 (78%) Frame = -2
A+ IE GAHHLDLR PNPLDPPSV AR++E LL+ W Sbjct: 465 ALTIEGGAHHLDLRYPNPLDPPSVTQAREIESKLLQLW 502 -------------------- gnl|ti|820222032 name:POAA-aab91h01.b1 mate_pair:820222624 (880 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAD71024.1| related to Ste20-like kinase Don3 [Neurospo... 67 6e-010 ref|NP_998473.1| serine/threonine kinase 25 [Danio rerio] >... 67 1e-009 ref|XP_683066.1| PREDICTED: similar to Serine/threonine kin... 67 1e-009 ref|XP_706809.1| PREDICTED: similar to Serine/threonine kin... 67 1e-009 ref|XP_706807.1| PREDICTED: similar to Serine/threonine kin... 67 1e-009 ref|XP_706806.1| PREDICTED: similar to Serine/threonine kin... 67 1e-009 ref|NP_006365.2| serine/threonine kinase 25 [Homo sapiens] ... 66 2e-009 gb|AAI04598.1| STK25 protein [Bos taurus] 66 2e-009 dbj|BAE31594.1| unnamed protein product [Mus musculus] 66 2e-009 dbj|BAE28307.1| unnamed protein product [Mus musculus] >gi|... 66 2e-009 >emb|CAD71024.1| related to Ste20-like kinase Don3 [Neurospora crassa] ref|XP_323436.1| hypothetical protein [Neurospora crassa] gb|EAA31622.1| hypothetical protein [Neurospora crassa] Length = 829
Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +2
IWS+GITA E+A G PY N PMK+ + ++ PPRLEG+FSR FKDFV Sbjct: 188 IWSLGITAIELAVGEPPYANIHPMKVLFQIPKNPPPRLEGKFSREFKDFV 237 Score = 57.0 bits (136), Expect = 8e-007 Identities = 26/47 (55%), Positives = 37/47 (78%) Frame = +3 Query: 69 LMKVGPISETYISMILREMLLGLQYLQSERRCHRNLKASNVLLSDKG 209 L+K G SE +I+++ RE+LLGL YL SE + HR++KA+NVLLS+ G Sbjct: 96 LLKPGNFSEVHIAIVCRELLLGLDYLHSEGKIHRDIKAANVLLSEAG 142 ------------------- gnl|ti|820222040 name:POAA-aab91h10.b1 mate_pair:820222633 (921 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P22280|RAS3_RHIRA Ras-like protein 3 >gi|168374|gb|AAA83... 55 3e-006 sp|P22278|RAS1_RHIRA Ras-like protein 1 >gi|168369|gb|AAA83... 53 1e-005 emb|CAA26191.1| SPRAS-protein [Schizosaccharomyces pombe] 53 1e-005 pir||TVBYSR transforming protein ras - fission yeast (Schi... 53 1e-005 emb|CAA77070.1| ras protein [Suberites domuncula] 53 2e-005 gb|AAB05646.1| ras1 protein [Physarum polycephalum] >gi|464... 53 2e-005 emb|CAB11218.1| ras1 [Schizosaccharomyces pombe] >gi|191144... 52 2e-005 emb|CAA27399.1| put. ras protein [Schizosaccharomyces pombe] 52 2e-005 ref|XP_651384.1| Ras family GTPase [Entamoeba histolytica H... 52 4e-005 ref|XP_650287.1| Ras family GTPase [Entamoeba histolytica H... 52 4e-005 >sp|P22280|RAS3_RHIRA Ras-like protein 3 gb|AAA83379.1| MRAS3 Length = 205 Score = 55.1 bits (131), Expect = 3e-006 Identities = 29/51 (56%), Positives = 36/51 (70%) Frame = +1
L+ + SR SFEEV F QI R+KD++ PM+LV NK DLEG+RQVSS Sbjct: 86 LVYSITSRLSFEEVNTFYQQIRRVKDRDS--FPMVLVGNKCDLEGDRQVSS 134 ------------------ gnl|ti|820222128 name:POAA-aab93a03.b1 mate_pair:820222721 (517 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAO51238.1| similar to Gcn5 INdependent; Gin1p [Saccharo... 63 5e-009 ref|XP_642746.1| hypothetical protein DDB0219998 [Dictyoste... 62 9e-009 ref|XP_690645.1| PREDICTED: similar to PHD finger protein 1... 62 1e-008 gb|AAF46150.2| CG3815-PA [Drosophila melanogaster] >gi|1786... 61 1e-008 gb|EAL31522.1| GA17705-PA [Drosophila pseudoobscura] 61 1e-008 ref|NP_001028733.1| PHD finger protein 12 isoform 1 [Homo s... 60 2e-008 dbj|BAE24837.1| unnamed protein product [Mus musculus] 60 2e-008 dbj|BAE41602.1| unnamed protein product [Mus musculus] 60 2e-008 ref|XP_691049.1| PREDICTED: similar to Phf12-prov protein [... 60 2e-008 ref|XP_688601.1| PREDICTED: similar to Phf12-prov protein [... 60 2e-008 >gb|AAO51238.1| similar to Gcn5 INdependent; Gin1p [Saccharomyces cerevisiae] [Dictyostelium discoideum] Length = 914 Score = 62.8 bits (151), Expect = 5e-009 Identities = 24/39 (61%), Positives = 27/39 (69%) Frame = -1
N D C CGDGG+LLCC+ C AS HL+C PPL IP G Sbjct: 60 NDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSG 98 -------------------- gnl|ti|820222736 name:POAA-aab93b06.g1 mate_pair:820222140 (796 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK21974.1| rRNA promoter binding protein [Rattus norveg... 67 5e-010 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 48 3e-004 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 44 0.005 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 42 0.031 ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 40 0.069 emb|CAH00931.1| unnamed protein product [Kluyveromyces lact... 38 0.45 emb|CAH00939.1| unnamed protein product [Kluyveromyces lact... 38 0.45 emb|CAB52874.1| SPCC830.01c [Schizosaccharomyces pombe] 37 0.76 ref|NP_588472.2| hypothetical protein SPCC1620.14c [Schizos... 37 0.76 >gb|AAK21974.1| rRNA promoter binding protein [Rattus norvegicus] ref|NP_671477.1| rRNA promoter binding protein [Rattus norvegicus] Length = 295
Identities = 43/83 (51%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = -2
AS+ A PA L P+ TQP+EPILIPKLRIRLA+FPY PE HLGDLLRI Sbjct: 135 ASSSRGARPAPLRAPARPTQPLEPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRI--W 192
G +P F G R RT Sbjct: 193 VRPGARFTPSPPDFQGPARAHRT 215 ----------------- gnl|ti|820222738 name:POAA-aab93b08.g1 mate_pair:820222142 (928 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|YP_206799.1| 3-hydroxy-3-methylglutaryl-coenzyme A redu... 49 2e-004 ref|NP_233110.1| 3-hydroxy-3-methylglutaryl CoA reductase [... 49 2e-004 ref|ZP_00750246.1| COG1257: Hydroxymethylglutaryl-CoA reduc... 49 2e-004 ref|ZP_00760989.1| COG1257: Hydroxymethylglutaryl-CoA reduc... 49 2e-004 ref|ZP_00754970.1| COG1257: Hydroxymethylglutaryl-CoA reduc... 49 2e-004 ref|ZP_00752609.1| COG1257: Hydroxymethylglutaryl-CoA reduc... 49 2e-004 ref|ZP_00747610.1| COG1257: Hydroxymethylglutaryl-CoA reduc... 49 2e-004 ref|NP_936681.1| hydroxymethylglutaryl-CoA reductase [Vibri... 48 4e-004 ref|NP_800478.1| 3-hydroxy-3-methylglutaryl CoA reductase [... 48 4e-004 ref|ZP_00765153.1| COG1257: Hydroxymethylglutaryl-CoA reduc... 48 4e-004 >ref|YP_206799.1| 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Vibrio fischeri ES114] gb|AAW87911.1| 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Vibrio fischeri ES114] Length = 419 Score = 49.3 bits (116), Expect = 2e-004 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = -1
AN +AA+YIACGQDAACVAE +G TR E Sbjct: 310 ANALAALYIACGQDAACVAESAIGMTRIE 338 Score = 35.0 bits (79), Expect = 3.7 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = -1 Query: 727 HFHSGLGSDKQGTFDVLQHARGRKVVVECTIPKESVEKDLKVTTDTIVRFRNNVALSDLA 548 + L DK+ + L+ RG+KV E IP + V+K L T + +++F +S + Sbjct: 240 YLDGNLSGDKKASSQTLRSVRGKKVTAEAHIPAKLVKKYLHTTPEKMMQF---TQMSTVG 296
GTI
Sbjct: 297 ATLSGTI 303 --------------------- gnl|ti|820222143 name:POAA-aab93b09.b1 mate_pair:820222739 (680 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|ABB04063.1| SacB [Shuttle/allelic-replacement vector pMQ... 98 3e-019 gb|AAZ04375.1| levansucrase [Cloning vector pJF361] 98 3e-019 sp|P94468|SACB_BACST Levansucrase precursor (Beta-D-fructof... 98 3e-019 >gb|AAZ04375.1| levansucrase [Cloning vector pJF361] Length = 473 Score = 97.8 bits (242), Expect = 3e-019 Identities = 48/48 (100%), Positives = 48/48 (100%) Frame = +1
MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISHITR Sbjct: 1 MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISHITR 48 Score = 36.2 bits (82), Expect = 0.96 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = +2 Query: 635 HDMLQIPEQQKNEKY 679 HDMLQIPEQQKNEKY Sbjct: 49 HDMLQIPEQQKNEKY 63 --------------- gnl|ti|820222739 name:POAA-aab93b09.g1 mate_pair:820222143 (904 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|YP_309947.1| IS1 ORF [Shigella sonnei Ss046] >gi|738550... 394 e-108 ------------- gnl|ti|820222144 name:POAA-aab93b11.b1 mate_pair:820222741 (719 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 62 2e-008 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 50 7e-005 gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 45 0.003 emb|CAH00932.1| unnamed protein product [Kluyveromyces lact... 41 0.044 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.17 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 36 1.4 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 35 2.4 gb|EAA21329.1| hypothetical protein [Plasmodium yoelii yoelii] 34 4.1 gb|AAV25282.1| hypothetical protein [Oryza sativa (japonica... 34 5.3 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102 Score = 61.6 bits (148), Expect = 2e-008 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = +3
++R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 60 SQRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 Score = 34.3 bits (77), Expect = 4.1 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 Query: 116 ACHVRSRKTTSYA*VGRSQEKSWWKVV 196 + VR+RK +YA GRSQ K WW+ V Sbjct: 43 SARVRTRKMVNYAWAGRSQRKLWWRSV 69 --------------------------- gnl|ti|820222148 name:POAA-aab93c03.b1 mate_pair:820222743 (593 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_103908.1| alcohol dehydrogenase [Mesorhizobium loti ... 51 2e-005 ref|NP_565050.1| HTH (HOTHEAD); aldehyde-lyase [Arabidopsis... 51 3e-005 dbj|BAA77842.1| ACE [Arabidopsis thaliana] 51 3e-005 gb|AAP54703.1| mandelonitrile lyase, putative [Oryza sativa... 48 2e-004 ref|XP_482271.1| putative mandelonitrile lyase [Oryza sativ... 48 2e-004 gb|AAF65820.1| putative mandelonitrile lyase [Oryza sativa] 48 2e-004 gb|EAL98211.1| Glucose-methanol-choline oxidoreductase:GMC ... 47 4e-004 dbj|BAD37582.1| putative (R)-(+)-mandelonitrile lyase isofo... 47 4e-004 gb|AAL11514.1| R-oxynitrile lyase isoenzyme 1 precursor [Pr... 47 4e-004 pdb|1JU2|B Chain B, Crystal Structure Of The Hydroxynitrile... 47 4e-004 >ref|NP_103908.1| alcohol dehydrogenase [Mesorhizobium loti MAFF303099] dbj|BAB49694.1| alcohol dehydrogenase [Mesorhizobium loti MAFF303099] Length = 538 Score = 51.2 bits (121), Expect = 2e-005 Identities = 25/39 (64%), Positives = 31/39 (79%) Frame = -3
+ SP+LL+LSGVGP A L+ LGI VV ANE VGAHL ++ Sbjct: 256 INSPQLLQLSGVGPSALLKGLGIAVVHANENVGAHLQDH 294 ----------------- gnl|ti|820222157 name:POAA-aab93c12.b1 mate_pair:820222751 (338 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|ZP_00284992.1| COG0625: Glutathione S-transferase [Burk... 96 3e-019 ref|YP_242912.1| glutathione S-transferase [Xanthomonas cam... 96 5e-019 ref|ZP_00819446.1| glutathione S-transferase family protein... 92 4e-018 ref|YP_364322.1| glutathione transferase [Xanthomonas campe... 91 2e-017 emb|CAG75616.1| putative glutathione S transferase [Erwinia... 90 2e-017 ref|YP_201359.1| glutathione S-transferase [Xanthomonas ory... 89 5e-017 ref|NP_642710.1| glutathione S-transferase [Xanthomonas axo... 89 6e-017 ref|ZP_00685646.1| Glutathione S-transferase, N-terminal [B... 87 2e-016 ref|ZP_00464897.1| Glutathione S-transferase, N-terminal [B... 86 5e-016 ref|ZP_00834208.1| COG0625: Glutathione S-transferase [Yers... 85 9e-016 >ref|ZP_00284992.1| COG0625: Glutathione S-transferase [Burkholderia fungorum LB400] Length = 225
Identities = 40/83 (48%), Positives = 66/83 (79%) Frame = -3
R Y+LHY+EGS PPL+++L+ +I S+PMPFFARPIA +I A+++++++ P++KL+L Sbjct: 93 RYTYWLHYAEGSAMPPLLLKLVALRIASAPMPFFARPIARKIAATLQSSFIDPQLKLHLG 152
Y+ EL K+ +F GN+F+AA ++ Sbjct: 153 YINQELSKTGWFVGNDFTAADVQ 175 --------------------------- gnl|ti|820222751 name:POAA-aab93c12.g1 mate_pair:820222157 (867 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_639105.1| G-protein subunit alpha 1 [Dictyostelium d... 73 1e-011 ref|XP_643229.1| G-protein subunit alpha 2 [Dictyostelium d... 67 8e-010 dbj|BAA81704.1| G protein a subunit 8 [Ephydatia fluviatilis] 67 1e-009 gb|AAC67568.1| rod transducin alpha subunit [Ambystoma tigr... 64 7e-009 pdb|1FQK|C Chain C, Crystal Structure Of The Heterodimeric ... 64 7e-009 ref|XP_294370.3| PREDICTED: guanine nucleotide binding prot... 63 1e-008 ref|XP_527800.1| PREDICTED: similar to guanine nucleotide b... 63 1e-008 ref|XP_870246.1| PREDICTED: similar to Guanine nucleotide-b... 63 1e-008 ref|XP_594414.2| PREDICTED: similar to Guanine nucleotide-b... 63 1e-008 Yüklə 3,49 Mb. Dostları ilə paylaş:
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