Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
|
|
gb|EAA75632.1| hypothetical protein FG05987.1 [Gibberella z... 56 2e-006 gb|EAL92577.1| phosphoglycerate mutase family domain protei... 54 5e-006 ref|XP_662587.1| hypothetical protein AN4983.2 [Aspergillus... 54 5e-006 emb|CAA89081.1| unknown [Saccharomyces cerevisiae] >gi|1431... 53 1e-005 ref|XP_639231.1| 2-phospho-D-glycerate hydrolase [Dictyoste... 53 1e-005 emb|CAG60093.1| unnamed protein product [Candida glabrata C... 52 2e-005 emb|CAG98631.1| unnamed protein product [Kluyveromyces lact... 51 5e-005 gb|AAL05461.1| enolase 1 [Prionitis lanceolata] 50 8e-005 >ref|XP_370145.1| hypothetical protein MG06642.4 [Magnaporthe grisea 70-15] Length = 633
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Frame = -1
F +E++K Y EPRLREQDFGNFQ MER+ ++R DYG FF+R E+ Sbjct: 90 FKREKIKVYEEPRLREQDFGNFQPCSAEMERMWQERADYGHFFYRIPNGES 140 ---------------- gnl|ti|820217111 name:POAA-aab66e08.g1 mate_pair:820216775 (893 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_629230.1| hypothetical protein DDB0215386 [Dictyoste... 60 8e-008 ref|XP_419644.1| PREDICTED: similar to Kinesin family membe... 55 2e-006 emb|CAG84719.1| unnamed protein product [Debaryomyces hanse... 52 4e-005 ref|XP_662117.1| hypothetical protein AN4513.2 [Aspergillus... 52 4e-005 ref|XP_617736.2| PREDICTED: similar to Kinesin family membe... 52 4e-005 ref|XP_542544.1| PREDICTED: similar to Kinesin family membe... 52 4e-005 gb|EAL87412.1| kinesin family protein [Aspergillus fumigatu... 50 8e-005 gb|AAH77623.1| MGC84657 protein [Xenopus laevis] 50 1e-004 gb|AAH47799.1| Hypothetical protein MGC55995 [Danio rerio] ... 49 2e-004 emb|CAG31387.1| hypothetical protein [Gallus gallus] >gi|71... 47 7e-004 >ref|XP_629230.1| hypothetical protein DDB0215386 [Dictyostelium discoideum AX4] gb|AAR39439.1| kinesin family member 10 [Dictyostelium discoideum] gb|EAL60798.1| hypothetical protein DDB0215386 [Dictyostelium discoideum] Length = 1238
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 5/71 (7%) Frame = +1
QVF+LL+YGN NR+QSPT+ N TSSRSHAVLQ+++ NL +SF + S I Sbjct: 214 QVFKLLKYGNLNRKQSPTQTNQTSSRSHAVLQITVKQQNLQDKSKISFGKL----SLIDL 269
G R KTL+
Sbjct: 270 AGSERASKTLN 280 Score = 53.5 bits (127), Expect = 9e-006 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 8/64 (12%) Frame = +2
+SM YLEVYNETIRDLL+ N++ L+L ED + + L YP +AD+V K Sbjct: 158 VSMSYLEVYNETIRDLLITNTGGGGNSNNKVLELCEDENKQIVIRDLSWEYPTSADQVFK 217
+ Y
Sbjct: 218 LLKY 221 Score = 50.4 bits (119), Expect = 8e-005 Identities = 21/34 (61%), Positives = 29/34 (85%) Frame = +1 Query: 73 HATQEEIYETTTKSLIPFVTNGFNATVFAYGATG 174 +ATQEE++E TTK L+ +V +G NA+VFAYGA+G Sbjct: 86 YATQEEVFENTTKELVSYVISGHNASVFAYGASG 119
Identities = 20/37 (54%), Positives = 30/37 (81%) Frame = +3
GAGKTHTM+G GPG+MVLTM++LF +E +++++ Sbjct: 119 GAGKTHTMVGGINTGPGIMVLTMKELFSLIEKDRSNQ 155 -------------------------- gnl|ti|820217113 name:POAA-aab66e11.g1 mate_pair:820216777 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Ory... 52 4e-005 ref|XP_525925.1| PREDICTED: similar to rRNA intron-encoded ... 50 1e-004 gb|AAL31950.1| CDH1-D [Gallus gallus] 50 1e-004 emb|CAH00948.1| unnamed protein product [Kluyveromyces lact... 42 0.022 emb|CAH00942.1| unnamed protein product [Kluyveromyces lact... 42 0.022 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.064 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.064 ref|ZP_00396973.1| hypothetical protein DgeoDRAFT_0651 [Dei... 39 0.24 gb|EAL83773.1| hypothetical protein DgeoDRAFT_1879 [Deinoco... 39 0.24 gb|AAN36071.1| hypothetical protein PF11_0493 [Plasmodium f... 37 1.2 >gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Oryza sativa] Length = 66
Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = -1
V+ TP P+ +S+GSGGSMVARLKLKGIDGRA Sbjct: 24 VAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRA 58 Score = 35.4 bits (80), Expect = 2.7 Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = -3 Query: 644 RRSDTVVVLTINDADQG*DSVHLDSFRT----LEKSRVYGFWGEYGRKAET*RN*RKGTQ 477 RRSDTV+V TINDADQG V ++RT EKS+ G G + + + Sbjct: 4 RRSDTVLVSTINDADQGSADV---AYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 60
VEPAA
Sbjct: 61 GVEPAA 66 ----------------------- gnl|ti|820216788 name:POAA-aab66f10.b1 mate_pair:820217121 (869 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAD88154.1| putative cdc2-like protein kinase cdc2MsC [... 101 4e-020 emb|CAD21952.1| putative cyclin dependent kinase [Physcomit... 99 2e-019 gb|AAV68597.1| cell cycle dependent kinase C [Ostreococcus ... 99 2e-019 ref|XP_475182.1| putative cdc2 protein kinase [Oryza sativa... 97 7e-019 emb|CAC51391.1| cyclin dependent kinase C [Lycopersicon esc... 97 9e-019 gb|AAZ67608.1| 80A08_23 [Brassica rapa subsp. pekinensis] 96 2e-018 emb|CAA65979.1| cdc2MsC [Medicago sativa] 94 5e-018 ref|NP_196589.1| CDKC;1; ATP binding / kinase/ protein kina... 94 6e-018 ref|XP_644773.1| putative CDK family protein kinase [Dictyo... 93 1e-017 gb|AAZ41831.1| 80C09_20 [Brassica rapa subsp. pekinensis] 93 1e-017 >dbj|BAD88154.1| putative cdc2-like protein kinase cdc2MsC [Oryza sativa (japonica cultivar-group)] Length = 513 Score = 101 bits (251), Expect = 4e-020 Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 3/92 (3%) Frame = +1
F ALDL++++LTLDPS+RISA +ALD++YFWT+P P DP +LPKY SHEFQ KK+RQ Sbjct: 294 FDQHALDLLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQ 353
Q ++ KR ++ P + +PP Q P Sbjct: 354 QQRQAEEAAKRQKLQHPPPHSRLPPIQNPGQP 385 ------------- gnl|ti|818424086 name:POAA-aab67a08.b1 mate_pair:818424432 (893 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 489 e-137 ------- gnl|ti|818424432 name:POAA-aab67a08.g1 mate_pair:818424086 (883 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 259 7e-068 ------------ gnl|ti|818424453 name:POAA-aab67c07.g1 mate_pair:818424107 (424 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_648794.1| conserved hypothetical protein [Entamoeba ... 53 4e-006 emb|CAD94849.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacteri... 52 7e-006 gb|AAK47022.1| conserved hypothetical protein [Mycobacteriu... 52 7e-006 pir||C70963 hypothetical protein Rv2631 - Mycobacterium tub... 52 7e-006 ref|XP_642393.1| hypothetical protein DDB0205483 [Dictyoste... 52 9e-006 ref|ZP_00868938.1| Protein of unknown function UPF0027 [Met... 51 1e-005 ref|XP_793085.1| PREDICTED: similar to CG9987-PA, partial [... 51 1e-005 ref|NP_247666.1| hypothetical protein MJ0682 [Methanocaldoc... 50 3e-005 gb|EAM93553.1| Protein of unknown function UPF0027 [Ferropl... 49 4e-005 gb|EAN32014.1| hypothetical protein, conserved [Theileria p... 49 6e-005 >ref|XP_648794.1| conserved hypothetical protein [Entamoeba histolytica HM-1:IMSS] gb|EAL43408.1| conserved hypothetical protein [Entamoeba histolytica HM-1:IMSS] Length = 535 Score = 52.8 bits (125), Expect = 4e-006 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = +2
+VC+M+H GSRGLGHQVC DY+ + + +P D+QLTGV Sbjct: 286 QVCIMVHCGSRGLGHQVCQDYINLCM--KSGICNPVDKQLTGV 326 ---------------------- gnl|ti|818424477 name:POAA-aab67e09.g1 mate_pair:818424132 (904 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAH79694.1| MGC80816 protein [Xenopus laevis] 100 7e-020 gb|AAH42929.1| Hmgcs1-prov protein [Xenopus laevis] 100 7e-020 ref|XP_636713.1| hydroxymethylglutaryl-CoA synthase [Dictyo... 100 9e-020 ref|XP_644076.1| hypothetical protein DDB0217522 [Dictyoste... 98 3e-019 gb|AAH83514.1| 3-hydroxy-3-methylglutaryl-Coenzyme A syntha... 97 6e-019 dbj|BAE00977.1| unnamed protein product [Macaca fascicularis] 97 6e-019 emb|CAH92111.1| hypothetical protein [Pongo pygmaeus] >gi|6... 97 6e-019 gb|AAH00297.2| HMGCS1 protein [Homo sapiens] 97 6e-019 ref|XP_662527.1| hypothetical protein AN4923.2 [Aspergillus... 96 2e-018 gb|EAL92515.1| hydroxymethylglutaryl-CoA synthase [Aspergil... 94 6e-018 >gb|AAH79694.1| MGC80816 protein [Xenopus laevis] Length = 520
Identities = 44/57 (77%), Positives = 52/57 (91%) Frame = -1
KSVKTVLM LF+ESGNT+++G+DT NACYGGT ALFNAV W+ESS WDGRYA+V+AG Sbjct: 102 KSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAG 158 Score = 43.9 bits (102), Expect = 0.008 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 162 GDIAIYAEGPARPTGGVGACAMLIG 88 GDIA+YA G ARPTGG GA AML+G Sbjct: 158 GDIAVYATGSARPTGGAGAVAMLVG 182 Score = 37.7 bits (86), Expect = 0.55 Identities = 18/38 (47%), Positives = 27/38 (71%) Frame = -3 Query: 617 SSFFFQVLKNLLEKFNINPADVGRLEVGTETILDKSVS 504 +S ++ L+E+ N++ +GRLEVGTETI+DKS S Sbjct: 66 NSLCLTAVQRLMERNNLSYDCIGRLEVGTETIIDKSKS 103 ------------------------------- gnl|ti|818424135 name:POAA-aab67e12.b1 (282 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 106 2e-022 ------------ nl|ti|818424484 name:POAA-aab67f07.g1 mate_pair:818424141 (846 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_758891.1| hypothetical protein UM02744.1 [Ustilago m... 77 1e-012 ref|XP_635289.1| hypothetical protein DDB0183975 [Dictyoste... 74 6e-012 gb|EAL20153.1| hypothetical protein CNBF2300 [Cryptococcus ... 73 1e-011 gb|AAW44028.1| conserved hypothetical protein [Cryptococcus... 73 1e-011 emb|CAG98277.1| unnamed protein product [Kluyveromyces lact... 67 1e-009 ref|XP_718105.1| putative OPT family transporter [Candida a... 65 3e-009 gb|AAS53356.1| AFL016Cp [Ashbya gossypii ATCC 10895] >gi|45... 64 6e-009 ref|XP_503395.1| hypothetical protein [Yarrowia lipolytica]... 64 8e-009 gb|AAX27763.1| SJCHGC01957 protein [Schistosoma japonicum] 63 1e-008 emb|CAG85275.1| unnamed protein product [Debaryomyces hanse... 62 2e-008 >ref|XP_758891.1| hypothetical protein UM02744.1 [Ustilago maydis 521] gb|EAK83555.1| hypothetical protein UM02744.1 [Ustilago maydis 521] Length = 740 Score = 76.6 bits (187), Expect = 1e-012 Identities = 37/46 (80%), Positives = 42/46 (91%) Frame = +1
L VRALGETDLNPVSGIGK+SQ++FA V PGNVVANL+AG I+EAG Sbjct: 477 LGVRALGETDLNPVSGIGKISQLIFALVQPGNVVANLVAGGIAEAG 522 -------------------- gnl|ti|818424145 name:POAA-aab67f11.b1 mate_pair:818424488 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 240 6e-062 --------------------- gnl|ti|818424490 name:POAA-aab67g02.g1 mate_pair:818424147 (887 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAO83650.1| putative protein Roco5 [Dictyostelium discoi... 97 7e-019 ref|XP_635392.1| cyclic GMP-binding protein [Dictyostelium ... 87 8e-016 gb|AAO83652.1| putative protein Roco7 [Dictyostelium discoi... 86 1e-015 ref|XP_647238.1| putative protein tyrosine kinase [Dictyost... 86 1e-015 ref|YP_143172.1| unknown [Acanthamoeba polyphaga mimivirus]... 79 2e-013 gb|AAQ54539.1| protein kinase [Malus x domestica] 79 2e-013 ref|YP_143185.1| serine/threonine protein kinase [Acanthamo... 78 4e-013 emb|CAC35360.1| SHK1 protein [Dictyostelium discoideum] 75 2e-012 ref|XP_639130.1| SH2 domain-containing protein [Dictyosteli... 75 2e-012 ref|XP_636808.1| putative protein tyrosine kinase [Dictyost... 75 3e-012 >gb|AAO83650.1| putative protein Roco5 [Dictyostelium discoideum] Length = 2800
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 4/91 (4%) Frame = +2
P++M YTEKADV+SFGIV WE+LT P+ EYP+A +F+ +LEDEI GLRPT+P+ Sbjct: 2347 PEIMRGDEYTEKADVYSFGIVLWEILTGLLPFDEYPVAHSSFMYQLEDEITNGLRPTIPQ 2406
++ PD + LI CW D RP+F+D+ Sbjct: 2407 NSVCGHPDFI-TLITDCWQNDPLKRPTFIDI 2436 Score = 96.7 bits (239), Expect = 1e-018 Identities = 48/97 (49%), Positives = 65/97 (67%) Frame = +3 Query: 72 MRLTILHNIADAMRHLHSRTPKICHRDLKPRNCLMASTDLNSNRETVDPADPTSPRQVQI 251 ++L I NIADA++H+H TPKICHRDLK N LM S D+N+ + Sbjct: 2274 LKLKIAINIADAIKHMHGFTPKICHRDLKSPNILMLS-DMNA----------------AV 2316
VCK++DFGE+R+VV SA GRD L NP+WL+PE++R + Sbjct: 2317 VCKVSDFGETRAVVTSALGRDKLSNPIWLSPEIMRGD 2353 -------------------------- gnl|ti|818424149 name:POAA-aab67g05.b1 mate_pair:818424493 (468 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAN97098.1| dynein heavy chain, putative [Trypanosoma cr... 57 2e-007 emb|CAJ08111.1| dynein heavy chain, putative [Leishmania ma... 56 5e-007 gb|AAX80961.1| dynein heavy chain, putative [Trypanosoma br... 54 2e-006 ref|XP_789656.1| PREDICTED: similar to dynein, axonemal, he... 49 6e-005 ref|XP_790145.1| PREDICTED: similar to CG1842-PA, partial [... 49 6e-005 ref|XP_415109.1| PREDICTED: similar to 1-alpha dynein heavy... 48 1e-004 emb|CAB56598.1| 1-alpha dynein heavy chain [Chlamydomonas r... 45 8e-004 ref|XP_543369.2| PREDICTED: similar to CG1842-PA [Canis fam... 45 0.001 ref|XP_355638.3| PREDICTED: dynein, axonemal, heavy chain 1... 44 0.001 ref|NP_997320.1| dynein, axonemal, heavy polypeptide 10 iso... 44 0.002 >gb|EAN97098.1| dynein heavy chain, putative [Trypanosoma cruzi] ref|XP_818949.1| dynein heavy chain [Trypanosoma cruzi] Length = 4602 Score = 57.0 bits (136), Expect = 2e-007 Identities = 26/43 (60%), Positives = 31/43 (72%) Frame = -1
V +F N P +KN PPVAGAI+WS SL Q++KKPIVRFQ Sbjct: 619 VRSIFVENRDNPPLTKNQPPVAGAIHWSTSLFQRLKKPIVRFQ 661 ----------------- PP41_resultat gnl|ti|818424504 name:POAA-aab67h10.g1 mate_pair:818424164 (924 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_789388.1| PREDICTED: similar to glucosidase, alpha; ... 73 2e-011 ref|XP_787183.1| PREDICTED: similar to Lysosomal alpha-gluc... 73 2e-011 dbj|BAB39467.1| putative alpha-glucosidase [Physcomitrella ... 71 7e-011 emb|CAG11433.1| unnamed protein product [Tetraodon nigrovir... 70 1e-010 gb|AAA68819.1| antigen [Tetrahymena pyriformis] 70 2e-010 gb|AAF76254.1| high pI alpha-glucosidase [Hordeum vulgare] 69 3e-010 sp|Q43763|AGLU_HORVU Alpha-glucosidase precursor (Maltase) ... 69 3e-010 sp|Q92442|AGLU_MUCJA Alpha-glucosidase precursor (Maltase) ... 69 4e-010 dbj|BAD45910.1| putative high pI alpha-glucosidase [Oryza s... 68 7e-010 dbj|BAC88138.1| alpha-glucosidase [Gloeobacter violaceus PC... 50 2e-004 >ref|XP_789388.1| PREDICTED: similar to glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Strongylocentrotus purpuratus] Length = 372 Score = 72.9 bits (164), Expect = 2e-011 Identities = 28/39 (71%), Positives = 32/39 (82%) Frame = +1
N +FG+ VGADICGFNG+TT ELC RWMQLG+ YPFS Sbjct: 48 NFNMFGIPMVGADICGFNGNTTEELCTRWMQLGAFYPFS 86 Score = 37.5 bits (80), Expect = 1.0 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = +2 Query: 320 RNHNVLGAISQEPYAFGQPLINISISALNTKYTLLPYFYT 439 RNHN L Q+P F S +AL +Y+LLPY YT Sbjct: 87 RNHNSLYMNDQDPAVFSSASQESSRNALLIRYSLLPYLYT 126 -------------------------- gnl|ti|820216828 name:POAA-aab68b04.b1 mate_pair:820217159 (913 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAD74160.1| coronin [Physarum polycephalum] 114 8e-024 emb|CAA43707.1| coronin [Dictyostelium discoideum] >gi|1169... 82 4e-014 ref|XP_647343.1| coronin [Dictyostelium discoideum] >gi|604... 82 4e-014 emb|CAF94994.1| unnamed protein product [Tetraodon nigrovir... 68 5e-010 ref|XP_628591.1| coronin-type [Cryptosporidium parvum] >gi|... 67 1e-009 ref|NP_001005826.1| coronin, actin binding protein, 2B [Xen... 67 2e-009 gb|AAT09095.1| coronin [Bigelowiella natans] 66 3e-009 ref|XP_667918.1| coronin [Cryptosporidium hominis] >gi|5465... 65 4e-009 dbj|BAE41150.1| unnamed protein product [Mus musculus] 65 4e-009 dbj|BAE41024.1| unnamed protein product [Mus musculus] 65 4e-009 >dbj|BAD74160.1| coronin [Physarum polycephalum] Length = 449 Score = 114 bits (262), Expect = 8e-024 Identities = 51/51 (100%), Positives = 51/51 (100%) Frame = -1
VEPISFRVPRKSDDFASDLFPDAYAGEAALTAEQWLAGENAEPILRSLAPG Sbjct: 341 VEPISFRVPRKSDDFASDLFPDAYAGEAALTAEQWLAGENAEPILRSLAPG 391 Score = 102 bits (235), Expect = 2e-020 Identities = 46/46 (100%), Positives = 46/46 (100%) Frame = -2 Query: 168 GFVPKTQPAATFNPVAQKVEEGPQTEKELRDAYEKLKTRVAYLEAE 31 GFVPKTQPAATFNPVAQKVEEGPQTEKELRDAYEKLKTRVAYLEAE Sbjct: 391 GFVPKTQPAATFNPVAQKVEEGPQTEKELRDAYEKLKTRVAYLEAE 436 Score = 72.5 bits (163), Expect = 3e-011 Identities = 32/37 (86%), Positives = 34/37 (91%) Frame = -3 Query: 836 TTPPQKGLAFLPKRSLNVNECEISRALKLHTNKVHAI 726 ++ PQKGLAFLPKRSLNVNECEISRALKLHTNKV I Sbjct: 308 SSTPQKGLAFLPKRSLNVNECEISRALKLHTNKVEPI 344 ----------------- gnl|ti|820217165 name:POAA-aab68b10.g1 mate_pair:820216834 (891 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAE69070.1| Hypothetical protein CBG15088 [Caenorhabdit... 163 9e-039 emb|CAE56149.1| Hypothetical protein CBG23762 [Caenorhabdit... 156 2e-036 emb|CAE56350.1| Hypothetical protein CBG24022 [Caenorhabdit... 155 2e-036 emb|CAE56068.1| Hypothetical protein CBG23644 [Caenorhabdit... 155 3e-036 emb|CAE61411.1| Hypothetical protein CBG05275 [Caenorhabdit... 154 5e-036 emb|CAE69662.1| Hypothetical protein CBG15910 [Caenorhabdit... 153 1e-035 emb|CAE71833.1| Hypothetical protein CBG18874 [Caenorhabdit... 153 1e-035 emb|CAE56418.1| Hypothetical protein CBG24110 [Caenorhabdit... 151 4e-035 emb|CAE60370.1| Hypothetical protein CBG03970 [Caenorhabdit... 149 2e-034 gb|AAB52621.2| Hypothetical protein ZC53.4 [Caenorhabditis ... 149 2e-034 >emb|CAE69070.1| Hypothetical protein CBG15088 [Caenorhabditis briggsae] Length = 1131 Score = 163 bits (380), Expect = 9e-039 Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 6/195 (3%) Frame = +2
+ +FR K Y LDPC Y+T PG++WD ML T +KLE ++D EMYLF E G+R + Sbjct: 620 FENFRNLSMKEYGLDPCWYYTSPGLSWDAMLKKTEVKLETIADNEMYLFIEKGIRGGMVN 679
R AKAN M Y+ + ++ YLDANNLYGWAM Q LPYG F++V+ + + Sbjct: 680 AVKRYAKANNKYMSEYNPNDKSKYLLYLDANNLYGWAMNQKLPYGTFEFVEGIENLQTEN 739
+Q ++ Q G LEVD+E P+ +H+ N +PL P + ++ NI KL TL Sbjct: 740 KIKQFINRLNEQEKGCILEVDLEYPQAIHDQHNDFPLCPQN---VKINRQNIAKLTNTLF 796
D KYVIHY+ L +A Sbjct: 797 DTQKYVIHYKNLLQA 811 ------------------------- gnl|ti|820216849 name:POAA-aab68d02.b1 mate_pair:820217180 (908 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_692271.1| PREDICTED: similar to chromosome 17 open r... 52 5e-005 emb|CAG00203.1| unnamed protein product [Tetraodon nigrovir... 51 9e-005 gb|AAL32171.1| chromosome 17 open reading frame 27 [Takifug... 51 9e-005 ref|XP_586217.2| PREDICTED: similar to chromosome 17 open r... 51 1e-004 emb|CAG03055.1| unnamed protein product [Tetraodon nigrovir... 50 2e-004 ref|XP_691386.1| PREDICTED: similar to chromosome 17 open r... 50 2e-004 ref|XP_511726.1| PREDICTED: similar to chromosome 17 open r... 49 3e-004 ref|NP_065965.3| chromosome 17 open reading frame 27 [Homo ... 49 4e-004 ref|XP_221191.3| PREDICTED: similar to chromosome 17 open r... 49 4e-004 ref|XP_590465.2| PREDICTED: similar to chromosome 17 open r... 48 5e-004 >ref|XP_692271.1| PREDICTED: similar to chromosome 17 open reading frame 27 [Danio rerio]
Length = 2962 Score = 51.8 bits (114), Expect = 5e-005 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Frame = +2
PLK LH L+E P + +GISNWALD AKMNR I + R +PD Sbjct: 1596 PLKTLHPLLEEGCIDDQPSPHKKVGFIGISNWALDPAKMNRGIFVSRGDPD 1646 ----------- gnl|ti|820216853 name:POAA-aab68d06.b1 mate_pair:820217184 (910 letters)
Score E
Sequences producing significant alignments: (bits) Value Yüklə 3,49 Mb. Dostları ilə paylaş:
|