Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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| gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Ory... 55 5e-006
ref|XP_525925.1| PREDICTED: similar to rRNA intron-encoded ... 53 3e-005 emb|CAH00949.1| unnamed protein product [Kluyveromyces lact... 52 4e-005 ref|XP_523367.1| PREDICTED: similar to rRNA intron-encoded ... 51 1e-004 gb|AAP92584.1| Ab2-057 [Rattus norvegicus] >gi|32492570|gb|... 43 0.016 emb|CAH00948.1| unnamed protein product [Kluyveromyces lact... 43 0.022 emb|CAH00942.1| unnamed protein product [Kluyveromyces lact... 43 0.022 ref|XP_578848.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.071 ref|XP_578845.1| PREDICTED: similar to Ac1147 [Rattus norve... 41 0.071 gb|AAN36071.1| hypothetical protein PF11_0493 [Plasmodium f... 39 0.41 >gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Oryza sativa] Length = 66 Score = 55.2 bits (122), Expect = 5e-006 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +2
V+ TP P+ +S+GSGGSMVARLKLKGIDGRA Sbjct: 24 VAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRA 58 Score = 35.8 bits (76), Expect = 3.1 Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = +1 Query: 112 RRSDTVVVLTINDADQG*DSVHLDSFRT----LEKSRVYGFWGEYGRKAET*RN*RKGTQ 279 RRSDTV+V TINDADQG V ++RT EKS+ G G + + + Sbjct: 4 RRSDTVLVSTINDADQGSADV---AYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 60
VEPAA
Sbjct: 61 GVEPAA 66 ------------- gnl|ti|820217184 name:POAA-aab68d06.g1 mate_pair:820216853 (790 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX26869.1| unknown [Schistosoma japonicum] 66 3e-009 dbj|BAD46202.1| hypothetical protein [Oryza sativa (japonic... 59 2e-007 gb|EAA16547.1| hypothetical protein [Plasmodium yoelii yoelii] 41 0.058 emb|CAH00932.1| unnamed protein product [Kluyveromyces lact... 40 0.19 gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio] 39 0.34 gb|EAA18799.1| hypothetical protein [Plasmodium yoelii yoelii] 38 0.60 ref|XP_800322.1| PREDICTED: hypothetical protein XP_795229,... 38 0.60 sp|Q90701|TEAD3_CHICK Transcriptional enhancer factor TEF-5... 38 0.81 >gb|AAX26869.1| unknown [Schistosoma japonicum] Length = 102 Score = 65.7 bits (147), Expect = 3e-009 Identities = 30/42 (71%), Positives = 32/42 (76%) Frame = -3
+R L RS AVLTCKS V+ YRGER IE SSWFPPKFPSG Sbjct: 61 QRKLWWRSVAVLTCKSVVRPGYRGERLIEPSSSWFPPKFPSG 102 Score = 37.1 bits (79), Expect = 1.1 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = -2 Query: 657 EVNAKSTQGEPMADPAMLS*PGSRSWIGV*ACHVRSRKTTSYA*VGRSQEKSWWKVV 487 EV ++ P A +S W + VR+RK +YA GRSQ K WW+ V Sbjct: 15 EVGSRGPSSPPRAHHRPVSPAAPGRWST--SARVRTRKMVNYAWAGRSQRKLWWRSV 69 ------------------- gnl|ti|820216879 name:POAA-aab68f12.b1 mate_pair:820217210 (896 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_634685.1| hypothetical protein MM2661 [Methanosarcin... 87 1e-015 gb|EAN20638.1| similar to Uncharacterized conserved protein... 86 3e-015 ref|ZP_00837507.1| conserved hypothetical protein [Shewanel... 84 8e-015 gb|AAM06197.1| conserved hypothetical protein [Methanosarci... 83 3e-014 ref|ZP_00586877.1| conserved hypothetical protein [Shewanel... 83 3e-014 ref|ZP_00559692.1| conserved hypothetical protein [Desulfit... 83 3e-014 emb|CAE10472.1| conserved hypothetical protein [Wolinella s... 79 4e-013 ref|NP_717835.1| hypothetical protein SO2239 [Shewanella on... 77 2e-012 ref|ZP_00582870.1| conserved hypothetical protein [Shewanel... 75 4e-012 ref|ZP_00063113.1| COG3603: Uncharacterized conserved prote... 74 9e-012 >ref|NP_634685.1| hypothetical protein MM2661 [Methanosarcina mazei Go1] gb|AAM32357.1| hypothetical protein [Methanosarcina mazei Goe1] Length = 142
Identities = 35/71 (49%), Positives = 54/71 (76%) Frame = -2
P ++ E+ + C+K+EGPLDFSL GI+A +++ LAE +IS F +ST++TDYILVK +LE Sbjct: 67 PSGIRAERGWSCLKVEGPLDFSLTGILAGISSALAEKRISIFTISTYDTDYILVKETDLE 126
+ AL++ G+ Sbjct: 127 RTSEALANEGY 137 ------------------ gnl|ti|820216881 name:POAA-aab68g02.b1 mate_pair:820217212 (446 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_177879.3| protein binding / tubulin-tyrosine ligase ... 73 7e-012 gb|AAG51663.1| hypothetical protein; 53486-49011 [Arabidops... 73 7e-012 gb|AAX27749.2| SJCHGC06277 protein [Schistosoma japonicum] 64 2e-009 ref|XP_394564.1| PREDICTED: similar to CG1550-PA [Apis mell... 64 2e-009 ref|XP_470529.1| Hypothetical protein [Oryza sativa (japoni... 61 3e-008 gb|AAF59188.2| CG1550-PA [Drosophila melanogaster] >gi|2143... 58 3e-007 gb|EAL24897.1| GA13769-PA [Drosophila pseudoobscura] 56 6e-007 emb|CAH65183.1| hypothetical protein [Gallus gallus] >gi|60... 55 2e-006 emb|CAE72906.1| Hypothetical protein CBG20224 [Caenorhabdit... 51 4e-005 emb|CAA87783.1| Hypothetical protein D2013.9 [Caenorhabditi... 51 4e-005 >ref|NP_177879.3| protein binding / tubulin-tyrosine ligase [Arabidopsis thaliana] gb|AAT35236.1| At1g77550 [Arabidopsis thaliana] Length = 855
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 3/141 (2%) Frame = +1
QF+GD+ R+ + ++I+KPWN+AR I ITDNLS Sbjct: 618 QFIGDYCV--RKRDQLNNLWILKPWNMARTIDTSITDNLS-------------------- 655
A R+ + GPK+ Y+ +PAL+ G KFDLRYV+ Sbjct: 656 -------------------------AIIRMMETGPKICQKYIEHPALFKGNKFDLRYVVL 690
++S+ PLE+Y ++ VRLS+ Sbjct: 691 VRSIDPLEIYLIEIFWVRLSN 711 ------------------- gnl|ti|820216894 name:POAA-aab68h04.b1 mate_pair:820217225 (899 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 508 e-142 -------------- gnl|ti|820217225 name:POAA-aab68h04.g1 mate_pair:820216894 (901 letters)
Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 270 1e-070 ------------ gnl|ti|820217232 name:POAA-aab68h11.g1 mate_pair:820216901 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAR90244.1| polyketide synthase [Botryotinia fuckeliana] 56 2e-006 dbj|BAC57028.1| protomycinolide IV synthase 1 [Micromonospo... 56 2e-006 dbj|BAA76543.1| polyketide synthase [Micromonospora griseor... 56 2e-006 gb|AAK81287.1| Polyketide synthase pksE (short-chain alcoho... 54 1e-005 gb|EAL86424.1| polyketide synthase, putative [Aspergillus f... 53 2e-005 gb|AAK19883.1| soraphen polyketide synthase A [Polyangium c... 52 5e-005 gb|AAA41145.1| fatty acid synthase 52 5e-005 gb|AAK73501.1| AmphI [Streptomyces nodosus] 49 4e-004 emb|CAA11039.1| rifamycin polyketide synthase, type 1 [Amyc... 47 0.002 gb|AAF71766.1| NysI [Streptomyces noursei] 46 0.002 >gb|AAR90244.1| polyketide synthase [Botryotinia fuckeliana] Length = 2264
Identities = 29/80 (36%), Positives = 40/80 (50%) Frame = +1
+QDGKT G+T P+ +AQESL++ VY + +D Sbjct: 342 NQDGKTPGITMPNGSAQESLMKWVY--------------------------ESAGIDPKD 375
Y+E HGTGTKVGDP+E + Sbjct: 376 TGYVEAHGTGTKVGDPIEAT 395 Score = 40.9 bits (88), Expect = 0.092 Identities = 20/39 (51%), Positives = 27/39 (69%) Frame = +1 Query: 544 AIGTVLGAVRDKESTPLHIGSVKSNIGHVEGASGLTGIL 660 A+ V G R+ + PL IGSVKSNIGH+E ASG+ ++ Sbjct: 396 ALYNVFGEGRNARN-PLFIGSVKSNIGHLEAASGIISVI 433 ------------- gnl|ti|818424596 name:POAA-aab69a04.g1 mate_pair:818424260 (860 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAP69616.1| nicotinate phosphoribosyltransferase-like pr... 72 3e-011 ref|XP_647373.1| NAPRTase [Dictyostelium discoideum] >gi|60... 72 3e-011 gb|AAC23757.1| unknown protein [Arabidopsis thaliana] 68 7e-010 ref|NP_179923.2| nicotinate phosphoribosyltransferase [Arab... 68 7e-010 ref|XP_788553.1| PREDICTED: similar to CG3714-PA, isoform A... 67 2e-009 ref|XP_787773.1| PREDICTED: similar to CG3714-PA, isoform A... 67 2e-009 ref|XP_623279.1| PREDICTED: similar to ENSANGP00000024340 [... 66 2e-009 emb|CAB16797.1| hypothetical protein [Arabidopsis thaliana]... 66 3e-009 gb|AAM13003.1| unknown protein [Arabidopsis thaliana] 66 3e-009 ref|NP_195412.2| nicotinate phosphoribosyltransferase [Arab... 66 3e-009 >gb|AAP69616.1| nicotinate phosphoribosyltransferase-like protein [Dictyostelium discoideum] Length = 589 Score = 72.5 bits (163), Expect = 3e-011 Identities = 33/46 (71%), Positives = 39/46 (84%) Frame = -2
L+ ++GPM +CQL ETTLL LVNFASLVATNAARH +A GK KV+L Sbjct: 167 LLRVEGPMILCQLFETTLLCLVNFASLVATNAARHRLAVGKEKVML 212 -------------- gnl|ti|818424263 name:POAA-aab69a07.b1 mate_pair:818424599 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAX30301.1| unknown [Schistosoma japonicum] 94 1e-017 emb|CAH00945.1| unnamed protein product [Kluyveromyces lact... 93 2e-017 gb|AAX27748.1| unknown [Schistosoma japonicum] 74 1e-011 emb|CAB51041.1| putative transcription factor [Periplaneta ... 70 1e-010 dbj|BAD26579.1| cytochrome P450 like_TBP [Citrullus lanatus] 67 1e-009 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 56 3e-006 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 54 1e-005 dbj|BAD18905.1| rRNA intron-encoded endonuclease [Thermopro... 51 8e-005 dbj|BAB33421.1| putative senescence-associated protein [Pis... 49 4e-004 dbj|BAD18906.1| rRNA intron-encoded endonuclease [Thermopro... 48 5e-004 >gb|AAX30301.1| unknown [Schistosoma japonicum] Length = 55
Identities = 40/44 (90%), Positives = 41/44 (93%) Frame = +1
LI DAHEW+NEIPTVPTYYLAKPQPRERAW N RGKKTLLSLTL Sbjct: 5 LISDAHEWMNEIPTVPTYYLAKPQPRERAWRNQRGKKTLLSLTL 48 ------------------ gnl|ti|818424265 name:POAA-aab69a09.b1 mate_pair:818424601 (320 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 163 2e-039 ------ gnl|ti|818424601 name:POAA-aab69a09.g1 mate_pair:818424265 (682 letters) Score E
Sequences producing significant alignments: (bits) Value sp|P03851|YPB3_ECOLI Hypothetical 9.4 kDa protein 194 3e-048 ---------- gnl|ti|818424626 name:POAA-aab69c11.g1 mate_pair:818424288 (521 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_421904.1| PREDICTED: similar to axonemal dynein heav... 70 1e-010 gb|EAL24531.1| CG17866-PA.3 [Drosophila melanogaster] >gi|6... 69 2e-010 gb|AAG29545.1| 1-beta dynein [Drosophila melanogaster] 69 2e-010 dbj|BAC26619.1| unnamed protein product [Mus musculus] 67 4e-010 emb|CAI52011.1| novel protein similar to dynein [Mus muscul... 67 4e-010 ref|XP_541831.2| PREDICTED: similar to axonemal dynein heav... 67 4e-010 ref|XP_354799.3| PREDICTED: similar to dynein, axonemal, he... 67 4e-010 ref|XP_612278.2| PREDICTED: similar to dynein, axonemal, he... 67 6e-010 ref|XP_793948.1| PREDICTED: similar to dynein, axonemal, he... 67 7e-010 ref|XP_790676.1| PREDICTED: similar to axonemal dynein heav... 67 7e-010 >ref|XP_421904.1| PREDICTED: similar to axonemal dynein heavy chain 7 [Gallus gallus] Length = 4028
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Frame = -2
+++P V+ I Q LG +F++PP L++A+ S +PL+ +L PG DP+ Sbjct: 3434 KIIPMVQEFIVQNLGRSFIEPPPFD----LSRAFSDSHSCTPLIFVLSPGA----DPMAA 3485
L + A+ + + +L +LS+GQGQGP+A + I +AV G ++ +C L S Sbjct: 3486 LVKFADDQGYSDTKLSSLSLGQGQGPIAMKMIEKAVKEGSWIVLQNCHLAS 3536 ------------- gnl|ti|818424305 name:POAA-aab69e09.b1 mate_pair:818424645 (943 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAZ72724.1| cytochrome oxidase subunit 2 [Physarum polyc... 62 3e-008 gb|AAS77744.1| cytochrome oxidase subunit II [Aleurodicus d... 49 3e-004 emb|CAC40908.1| cytochrome oxidase subunit II [Nesotes conf... 49 3e-004 emb|CAC40877.1| cytochrome oxidase subunit II [Nesotes alti... 49 3e-004 emb|CAC40897.1| cytochrome oxidase subunit II [Nesotes conf... 49 3e-004 emb|CAC40866.1| cytochrome oxidase subunit II [Nesotes aeth... 49 3e-004 emb|CAC40933.1| cytochrome oxidase subunit II [Nesotes pice... 49 3e-004 emb|CAC40927.1| cytochrome oxidase subunit II [Nesotes pice... 49 3e-004 emb|CAC40920.1| cytochrome oxidase subunit II [Nesotes fusc... 49 3e-004 emb|CAC40890.1| cytochrome oxidase subunit II [Nesotes cong... 49 3e-004 >gb|AAZ72724.1| cytochrome oxidase subunit 2 [Physarum polycephalum] Length = 238
Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 6/96 (6%) Frame = +2
LGLEWDSYMI +K + DNPLFV ++ + + TSKDVI + K D Sbjct: 135 LGLEWDSYMINEPDLVKGEPRLLTVDNPLFVPVETNVRLLITSKDVIHAFAVPSLGLKVD 194
AVPGRLNQ Y+ ++Y ELCGVNHAFM Sbjct: 195 AVPGRLNQLSCYINRPGIYY--GQCSELCGVNHAFM 228
Identities = 47/129 (36%), Positives = 58/129 (44%), Gaps = 8/129 (6%) Frame = +1
FEPQIT+K+ W + +G +D NEPDLVKGE + + VET Sbjct: 113 FEPQITIKVIANQWYWSFEY---GNLGLEWDSYMINEPDLVKGEPRLLTVDNPLFVPVET 169
NV L + HAFAVP K +SCYINR + + F Sbjct: 170 NVRLLITSKDVIHAFAVPSLGLKVDAVPGRLNQLSCYINRPGIYYGQCSELCGVNHAFMP 229
LQIVSF WD Sbjct: 230 LQIVSFKWD 238 ------------------ gnl|ti|818415006 name:POAA-aab70c02.b1 mate_pair:818416346 (906 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAL87403.1| cactin [Aspergillus fumigatus Af293] >gi|709... 59 3e-007 ref|XP_662124.1| hypothetical protein AN4520.2 [Aspergillus... 59 3e-007 ref|XP_329757.1| hypothetical protein [Neurospora crassa] >... 59 3e-007 gb|EAA70740.1| hypothetical protein FG00794.1 [Gibberella z... 59 3e-007 ref|NP_909925.1| unknown protein [Oryza sativa (japonica cu... 59 4e-007 ref|NP_171887.1| unknown protein [Arabidopsis thaliana] >gi... 59 4e-007 emb|CAB76745.1| Hypothetical protein W03H9.4 [Caenorhabditi... 55 5e-006 gb|EAL23538.1| hypothetical protein CNBA1850 [Cryptococcus ... 55 5e-006 gb|AAW40750.1| cactin, putative [Cryptococcus neoformans va... 55 5e-006 emb|CAE73535.1| Hypothetical protein CBG20998 [Caenorhabdit... 55 5e-006 >gb|EAL87403.1| cactin [Aspergillus fumigatus Af293] ref|XP_749441.1| cactin [Aspergillus fumigatus Af293] Length = 568 Score = 59.0 bits (131), Expect = 3e-007 Identities = 21/23 (91%), Positives = 23/23 (100%) Frame = +3
+NQTHYDHDNPPPKVVQGYKFN+ Sbjct: 443 YNQTHYDHDNPPPKVVQGYKFNI 465 Score = 57.3 bits (127), Expect = 1e-006 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = +3 Query: 159 YNQTHYYHDNPPPKVVQGYKFNV 227 YNQTHY HDNPPPKVVQGYKFN+ Sbjct: 443 YNQTHYDHDNPPPKVVQGYKFNI 465 Score = 34.6 bits (73), Expect = 7.5 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +2 Query: 710 HPPPKVVQGYKFNV 751 +PPPKVVQGYKFN+ Sbjct: 452 NPPPKVVQGYKFNI 465 ---------------- gnl|ti|818415008 name:POAA-aab70c04.b1 mate_pair:818416348 (895 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAG41774.1| Cat [Promoter probe vector pPR9TT] 508 e-142 ------- gnl|ti|818416348 name:POAA-aab70c04.g1 mate_pair:818415008 (890 letters) Score E
Sequences producing significant alignments: (bits) Value pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimu... 270 9e-071 ----------- gnl|ti|818415009 name:POAA-aab70c05.b1 mate_pair:818416349 (897 letters) Score E
Sequences producing significant alignments: (bits) Value ref|NP_001031939.1| ubiquitin conjugating enzyme/ ubiquitin... 49 3e-004 ref|XP_466921.1| putative ubiquitin-conjugating enzyme E2 [... 48 6e-004 ref|XP_643940.1| hypothetical protein DDB0167874 [Dictyoste... 42 0.052 gb|AAN16047.1| ubiquitin-conjugating enzyme E2 [Pavlova lut... 41 0.093 ref|XP_746022.1| ubiquitin-conjugating enzyme E2, putative ... 40 0.22 gb|EAA22697.1| probable ubiquitin-conjugating enzyme e2-17 ... 39 0.30 gb|AAX69380.1| ubiquitin-conjugating enzyme E2, putative [T... 38 0.54 ref|NP_703724.1| ubiquitin-conjugating enzyme E2, putative ... 37 1.3 ref|XP_675637.1| ubiquitin-conjugating enzyme E2, putative ... 37 1.7 gb|AAK72082.1| Serpentine receptor, class d (delta) protein... 35 5.5 >ref|NP_001031939.1| ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] ref|NP_568476.1| ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] gb|AAY44861.1| ubiquitinating enzyme [Arabidopsis thaliana] gb|AAM60888.1| E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] Length = 157 Score = 49.3 bits (108), Expect = 3e-004 Identities = 21/27 (77%), Positives = 24/27 (88%) Frame = -2
+GNLLRSGDVRG+NS+A MYTRL A P Sbjct: 128 SGNLLRSGDVRGFNSMAQMYTRLAAMP 154 ---------------- gnl|ti|818416361 name:POAA-aab70d05.g1 mate_pair:818415021 (893 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_635569.1| hypothetical protein DDB0189069 [Dictyoste... 94 1e-017 ref|NP_758461.1| SID1 transmembrane family, member 2 [Mus m... 44 0.009 gb|AAQ88807.1| multi-transmembrane domain immunoglobulin-li... 44 0.009 ref|XP_508774.1| PREDICTED: similar to multi-transmembrane ... 44 0.009 ref|XP_526266.1| PREDICTED: similar to SID1 transmembrane f... 44 0.009 gb|AAH51101.1| Sidt2 protein [Mus musculus] 44 0.009 gb|AAH06873.1| Sidt2 protein [Mus musculus] 44 0.009 ref|NP_060169.1| SID1 transmembrane family, member 1 [Homo ... 44 0.009 ref|NP_057080.1| SID1 transmembrane family, member 2 [Homo ... 44 0.009 ref|XP_236205.3| PREDICTED: similar to Sidt2 protein [Rattu... 44 0.009 >ref|XP_635569.1| hypothetical protein DDB0189069 [Dictyostelium discoideum] gb|EAL62065.1| hypothetical protein DDB0189069 [Dictyostelium discoideum] Length = 777 Score = 94.0 bits (214), Expect = 1e-017 Identities = 41/80 (51%), Positives = 54/80 (67%) Frame = -3
+ P+YLKY+WKI+L+V AFY LPSIQFV+FQ DPE++CY+N+KC G +FNN Sbjct: 54 KTQPVYLKYFWKILLIVSAFYSLPSIQFVVFQITDPEIKCYYNYKCLRPFLGIPSFNN-- 111
+L F LI +F L F Sbjct: 112 VLSNLFYLIAGTSFILITHF 131 --------------------- gnl|ti|818416373 name:POAA-aab70e05.g1 mate_pair:818415031 (900 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL54899.1| GCN5-like protein [Lapemis hardwickii] 54 1e-005 ref|XP_509120.1| PREDICTED: similar to GCN5-like protein 1 ... 53 2e-005 ref|NP_056555.2| general control of amino acid synthesis-li... 53 2e-005 ref|NP_001478.1| GCN5 general control of amino-acid synthes... 53 2e-005 emb|CAA83011.1| Hypothetical protein T20G5.10 [Caenorhabdit... 53 2e-005 ref|XP_871974.1| PREDICTED: similar to Biogenesis of lysoso... 53 2e-005 ref|XP_538219.2| PREDICTED: similar to general control of a... 53 2e-005 gb|AAH66340.1| Unknown (protein for MGC:87455) [Homo sapiens] 53 2e-005 ref|XP_795323.1| PREDICTED: similar to general control of a... 53 2e-005 emb|CAA74108.1| GCN5L1 protein [Mus musculus] 53 2e-005 >gb|AAL54899.1| GCN5-like protein [Lapemis hardwickii] Length = 125
Identities = 23/39 (58%), Positives = 28/39 (71%) Frame = +1
FN +E+GD+ENWA++IE DM IA ALEYVYK P Sbjct: 84 FNQALKEIGDVENWARSIEMDMRTIATALEYVYKGQLQP 122 -------------------- PP42_Resultat
mate_pair:818415050 (897 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAA41103.1| dynein heavy chain 130 6e-029 ref|NP_084514.1| dynein, cytoplasmic, heavy chain 1 [Mus mu... 130 6e-029 ref|XP_579426.1| PREDICTED: dynein, cytoplasmic, heavy chai... 130 6e-029 ref|NP_062099.2| dynein, cytoplasmic, heavy chain 1 [Rattus... 129 2e-028 ref|NP_001367.2| dynein, cytoplasmic, heavy polypeptide 1 [... 128 3e-028 dbj|BAA20783.3| KIAA0325 protein [Homo sapiens] 128 3e-028 gb|AAB09727.1| cytoplasmic dynein heavy chain 1 (DHC1) [Hom... 128 3e-028 ref|XP_617931.2| PREDICTED: similar to dynein, cytoplasmic,... 127 5e-028 ref|XP_869785.1| PREDICTED: similar to dynein, cytoplasmic,... 127 5e-028 ref|XP_537556.2| PREDICTED: similar to dynein, cytoplasmic,... 127 5e-028 >gb|AAA41103.1| dynein heavy chain Length = 4644 Yüklə 3,49 Mb. Dostları ilə paylaş:
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