Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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emb|CAE70527.1| Hypothetical protein CBG17156 [Caenorhabdit... 46 0.001 ref|ZP_00503648.1| Glycoside hydrolase, family 9:Clostridiu... 45 0.002 gb|AAL86954.1| similar to Homo sapiens (Human). MUS81 endon... 45 0.002 ref|XP_643164.1| hypothetical protein DDB0203879 [Dictyoste... 45 0.002 gb|AAM14961.1| hypothetical protein [Arabidopsis thaliana] 43 0.009 ref|NP_181984.1| hydrolase, hydrolyzing O-glycosyl compound... 43 0.009 ref|XP_625680.1| DNA topoisomerase II [Cryptosporidium parv... 42 0.012 ref|ZP_00505159.1| Glycoside hydrolase, family 9:Clostridiu... 42 0.016 >emb|CAC16463.1| putative secreted hydrolase [Streptomyces coelicolor A3(2)] ref|NP_631626.1| putative secreted hydrolase [Streptomyces coelicolor A3(2)] Length = 633
Identities = 23/44 (52%), Positives = 27/44 (61%) Frame = -2
+TGD Y D Q W FG NAWG SF++G G +P C QHQV Sbjct: 500 VTGDHRYDDFAAQQRAWVFGANAWGTSFVVGAGDLYPHCLQHQV 543 ------------- gnl|ti|820220381 name:POAA-aaa28f05.g1 (915 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_637185.1| hypothetical protein DDB0187526 [Dictyoste... 68 4e-010 ref|XP_447526.1| unnamed protein product [Candida glabrata]... 60 1e-007 ref|XP_813011.1| endonuclease G [Trypanosoma cruzi] >gi|708... 58 4e-007 ref|XP_806210.1| endonuclease G [Trypanosoma cruzi] >gi|708... 58 4e-007 gb|AAX78924.1| endonuclease G, putative [Trypanosoma brucei... 57 7e-007 gb|AAX78929.1| endonuclease G, putative [Trypanosoma brucei... 57 7e-007 ref|XP_359453.1| hypothetical protein MG05324.4 [Magnaporth... 57 7e-007 gb|AAB03265.1| putative nuclease; Method: conceptual transl... 57 7e-007 ref|XP_322116.1| hypothetical protein [Neurospora crassa] >... 56 2e-006 gb|AAI04214.1| ENDOGL1 protein [Homo sapiens] >gi|74353774|... 56 2e-006 >ref|XP_637185.1| hypothetical protein DDB0187526 [Dictyostelium discoideum] gb|EAL63675.1| hypothetical protein DDB0187526 [Dictyostelium discoideum] Length = 455
Identities = 32/70 (45%), Positives = 50/70 (71%) Frame = -1
+YEVIG+ NVAVP ++FK+ILV+PK+ N ++ +L+ +FL+PNE I D VLTD+ Sbjct: 290 KYEVIGDRNVAVPNYLFKIILVEPKD--DNNNNKQQQPYLVSSFLIPNEPISSDAVLTDY 347
+V +E++
Sbjct: 348 QVPLHEIEVK 357 ------------ gnl|ti|818419275 name:POAA-aaa28j15.b1 mate_pair:820220399 (439 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_791929.1| PREDICTED: similar to colon cancer-associa... 86 4e-016 emb|CAF93193.1| unnamed protein product [Tetraodon nigrovir... 79 4e-014 ref|NP_083899.1| colon cancer-associated protein Mic1 homol... 79 6e-014 gb|AAH08305.2| Chromosome 18 open reading frame 8 [Homo sap... 79 6e-014 ref|NP_037458.2| chromosome 18 open reading frame 8 [Homo s... 79 6e-014 ref|XP_848531.1| PREDICTED: similar to Protein C18orf8 (Col... 79 6e-014 dbj|BAE25975.1| unnamed protein product [Mus musculus] 79 6e-014 dbj|BAE35292.1| unnamed protein product [Mus musculus] 79 6e-014 gb|AAH87672.1| Similar to RIKEN cDNA 2400010D15 (predicted)... 79 6e-014 gb|AAD33909.1| colon cancer-associated protein Mic1 [Homo s... 79 6e-014 >ref|XP_791929.1| PREDICTED: similar to colon cancer-associated protein Mic1 homolog, partial [Strongylocentrotus purpuratus] Length = 144 Score = 85.9 bits (211), Expect = 4e-016 Identities = 46/76 (60%), Positives = 59/76 (77%), Gaps = 5/76 (6%) Frame = +2
Q+ ++ FL+ + H C +YQLHQFLQYHV+SDS +AC LLSLES YPPAYQLAL Sbjct: 25 QIPVQHFLYELVINTLVHHNC-FYQLHQFLQYHVLSDSKPIACLLLSLESCYPPAYQLAL 83
DM+KRL+T +E+I+EV Sbjct: 84 DMLKRLTTANEEIIEV 99 ----------------------------- gnl|ti|820220405 name:POAA-aaa28l03.g1 (673 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAD70430.1| probable GLUCAN ENDO-1, 3-BETA-GLUCOSIDASE ... 75 2e-012 ref|XP_324462.1| hypothetical protein [Neurospora crassa] >... 75 2e-012 gb|AAL84695.1| beta-1,3-glucanase precursor [Hypocrea virens] 64 3e-009 gb|AAL84694.1| beta-1,3-glucanase precursor [Hypocrea virens] 59 1e-007 dbj|BAD67019.1| laminarinase [Trichoderma viride] 59 1e-007 gb|AAX27955.1| unknown [Schistosoma japonicum] 59 1e-007 pir||T31613 hypothetical protein Y50E8A.i - Caenorhabditis ... 59 1e-007 gb|EAA75332.1| hypothetical protein FG11006.1 [Gibberella z... 58 3e-007 ref|XP_799835.1| PREDICTED: hypothetical protein XP_794742 ... 55 3e-006 ref|XP_646781.1| hypothetical protein DDB0191040 [Dictyoste... 53 7e-006 >emb|CAD70430.1| probable GLUCAN ENDO-1, 3-BETA-GLUCOSIDASE BGN13.1 PRECURSOR [Neurospora crassa] Length = 798 Score = 75.1 bits (183), Expect = 2e-012 Identities = 31/40 (77%), Positives = 36/40 (90%) Frame = -2
++ +ANYI GGS+IRTYASASWAFFSGPGYQ CAG +QCQ Sbjct: 699 RMGFANYINGGSNIRTYASASWAFFSGPGYQGCAGQYQCQ 738 -------------- gnl|ti|818419292 name:POAA-aaa28n13.b1 mate_pair:820220422 (599 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|NP_187170.2| catalytic [Arabidopsis thaliana] >gi|19699... 47 5e-004 ref|NP_568496.1| catalytic [Arabidopsis thaliana] >gi|23308... 46 7e-004 emb|CAD70620.1| branched-chain amino acid aminotransferase-... 45 0.001 gb|AAQ22725.1| amino acid aminotransferase [Glycine max] 44 0.005 ref|NP_048420.1| a72L [Paramecium bursaria Chlorella virus ... 34 2.8 gb|AAP87275.1| CtsF [Campylobacter jejuni] 34 3.6 gb|AAF49118.1| CG8743-PA [Drosophila melanogaster] >gi|1794... 33 4.7 gb|EAL30473.1| GA21296-PA [Drosophila pseudoobscura] 33 4.7 ref|YP_179624.1| general secretory pathway protein F [Campy... 33 6.2 ref|NP_760516.1| Type IV pilin biogenesis protein [Vibrio v... 33 6.2 >ref|NP_187170.2| catalytic [Arabidopsis thaliana] gb|AAL90940.1| AT3g05190/T12H1_16 [Arabidopsis thaliana] gb|AAL58936.1| putative branched-chain amino acid aminotransferase [Arabidopsis thaliana] sp|Q8W0Z7|BAL1_ARATH Branched-chain-amino-acid aminotransferase-like protein 1 (Atbcat-like) Length = 555 Score = 46.6 bits (109), Expect = 5e-004 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = -3
R++LTRGKKVTS M P N+YG TLIVLAE++ Sbjct: 350 RLSLTRGKKVTSGMSPAYNRYGCTLIVLAEWK 381 ------------- gnl|ti|820220425 name:POAA-aaa28n19.g1 mate_pair:818419295 (842 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Ory... 52 3e-005 ref|XP_525925.1| PREDICTED: similar to rRNA intron-encoded ... 50 1e-004 gb|AAL31950.1| CDH1-D [Gallus gallus] 50 1e-004 ref|XP_453853.1| unnamed protein product [Kluyveromyces lac... 49 2e-004 ref|XP_523367.1| PREDICTED: similar to rRNA intron-encoded ... 49 2e-004 ref|XP_453852.1| unnamed protein product [Kluyveromyces lac... 42 0.020 ref|XP_453846.1| unnamed protein product [Kluyveromyces lac... 42 0.020 ref|ZP_00396973.1| hypothetical protein DgeoDRAFT_0651 [Dei... 39 0.22 ref|ZP_00395909.1| hypothetical protein DgeoDRAFT_1879 [Dei... 39 0.22 ref|NP_701347.1| hypothetical protein PF11_0493 [Plasmodium... 36 1.9 >gb|AAK13589.1| rRNA intron-encoded homing endonuclease [Oryza sativa] Length = 66
Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = -1
V+ TP P+ +S+GSGGSMVARLKLKGIDGRA Sbjct: 24 VAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRA 58 Score = 35.4 bits (80), Expect = 2.4 Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = -3 Query: 462 RRSDTVVVLTINDADQG*DSVHLDSFRT----LEKSRVYGFWGEYGRKAET*RN*RKGTQ 295 RRSDTV+V TINDADQG V ++RT EKS+ G G + + + Sbjct: 4 RRSDTVLVSTINDADQGSADV---AYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 60
VEPAA
Sbjct: 61 GVEPAA 66 ------------- gnl|ti|818418056 name:POAA-aaa29b22.g1 mate_pair:818418379 (736 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAG07509.1| unnamed protein product [Tetraodon nigrovir... 82 2e-014 gb|EAL22226.1| hypothetical protein CNBC3640 [Cryptococcus ... 79 1e-013 gb|EAN76947.1| AMP deaminase, putative [Trypanosoma brucei]... 77 6e-013 gb|EAN99690.1| AMP deaminase, putative [Trypanosoma cruzi] ... 77 8e-013 gb|EAN97012.1| AMP deaminase, putative [Trypanosoma cruzi] ... 77 8e-013 gb|AAZ14702.1| amp deaminase, putative [Leishmania major st... 76 1e-012 ref|XP_652654.1| AMP deaminase, putative [Entamoeba histoly... 76 1e-012 emb|CAB97316.2| probable AMP deaminase [Neurospora crassa] 74 4e-012 ref|XP_330167.1| probable AMP deaminase [MIPS] [Neurospora ... 74 4e-012 ref|XP_503822.1| hypothetical protein [Yarrowia lipolytica]... 73 1e-011 >emb|CAG07509.1| unnamed protein product [Tetraodon nigroviridis] Length = 816
Identities = 41/62 (66%), Positives = 49/62 (79%) Frame = -1
A +L +Y L Q IGIA+SPLSNNSLFL Y+RNP P++ +RGL VSLSTDDPLQFH+ Sbjct: 657 APVLQYLYYLAQ----IGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHF 712
TK Sbjct: 713 TK 714 Score = 60.5 bits (145), Expect = 6e-008 Identities = 41/135 (30%), Positives = 55/135 (40%), Gaps = 31/135 (22%) Frame = -2
+YY ++Y + T LN R ++GF+TL LRPH G Sbjct: 567 SYYLYYMYANM-TVLNHLRRQRGFHTLVLRPHCG-------------------------- 599
EAG + H+ S F+++ I+HG+ LRK AP Sbjct: 600 EAGPIHHLVSGFMLSENISHGLLLRKVSTDGLFPLFPLSRACWADASSLNSWLNPRQAPV 659
LQYLYYL QIG S Sbjct: 660 LQYLYYLAQIGIAMS 674 --------------- gnl|ti|818418411 name:POAA-aaa29j02.b1 mate_pair:818418090 (521 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAN62917.1| cathepsin D [Ctenopharyngodon idella] 84 3e-015 gb|AAH75134.1| LOC443721 protein [Xenopus laevis] 79 7e-014 gb|AAH94178.1| LOC443721 protein [Xenopus laevis] 79 7e-014 gb|AAH61433.1| Cathepsin D (lysosomal aspartyl protease) [X... 79 7e-014 gb|AAV84085.2| aspartic proteinase 9 [Fagopyrum esculentum] 79 9e-014 emb|CAA08878.1| Cathepsin D [Podarcis sicula] 78 2e-013 gb|AAL61540.1| cathepsin D precursor [Danio rerio] 77 3e-013 ref|XP_709936.1| PREDICTED: similar to Ctsd protein isoform... 77 3e-013 ref|XP_709923.1| PREDICTED: similar to Ctsd protein isoform... 77 3e-013 ref|XP_709924.1| PREDICTED: similar to Ctsd protein isoform... 77 3e-013 >gb|AAN62917.1| cathepsin D [Ctenopharyngodon idella] Length = 203
Identities = 38/63 (60%), Positives = 48/63 (76%) Frame = +2
+PT+PTISFVL GKT+SLT +QY+L+ + Q C+SGF+GLD+PP GPL I GDV G Sbjct: 123 VPTLPTISFVLGGKTYSLTGEQYILKESQAGQEICLSGFMGLDIPPPAGPLWILGDVFIG 182
YY Sbjct: 183 QYY 185 ------------------ gnl|ti|818418418 name:POAA-aaa29j18.b1 mate_pair:818418097 (681 letters) Score E
Sequences producing significant alignments: (bits) Value emb|CAB56598.1| 1-alpha dynein heavy chain [Chlamydomonas r... 72 1e-011 gb|AAX80961.1| dynein heavy chain, putative [Trypanosoma br... 55 3e-006 ref|NP_001363.1| dynein, axonemal, heavy polypeptide 9 isof... 52 2e-005 ref|XP_511833.1| PREDICTED: dynein, axonemal, heavy polypep... 52 2e-005 ref|XP_863527.1| PREDICTED: similar to dynein, axonemal, he... 52 2e-005 ref|XP_851319.1| PREDICTED: similar to dynein, axonemal, he... 52 2e-005 gb|AAF69004.1| ciliary dynein heavy chain 9 [Homo sapiens] ... 52 2e-005 emb|CAI24582.1| novel protein (possible ortholog of human d... 52 2e-005 ref|NP_997320.1| dynein, axonemal, heavy polypeptide 10 iso... 52 2e-005 ref|XP_110968.5| PREDICTED: dynein, axonemal, heavy polypep... 52 2e-005 >emb|CAB56598.1| 1-alpha dynein heavy chain [Chlamydomonas reinhardtii] sp|Q9SMH3|DYH1A_CHLRE Dynein 1-alpha heavy chain, flagellar inner arm I1 complex (1-alpha DHC) (Dynein 1, subspecies f) Length = 4625
Identities = 32/67 (47%), Positives = 42/67 (62%) Frame = +3
K + W D++ AM L I S T + VNFHPDL +IRET+YLD++G+ IPE Sbjct: 746 KWFSSWSDSINGVAMQHLKQTIFRRSAATNRVEVNFHPDLVRLIRETRYLDRMGFPIPEI 805
ALN+ LQ
Sbjct: 806 ALNVALQ 812 ------------- gnl|ti|818418097 name:POAA-aaa29j18.g1 mate_pair:818418418 (716 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAB56598.1| 1-alpha dynein heavy chain [Chlamydomonas r... 93 7e-018 ref|XP_790145.1| PREDICTED: similar to CG1842-PA, partial [... 86 1e-015 ref|NP_997320.1| dynein, axonemal, heavy polypeptide 10 iso... 86 2e-015 ref|XP_543369.2| PREDICTED: similar to CG1842-PA [Canis fam... 85 3e-015 ref|XP_355638.3| PREDICTED: dynein, axonemal, heavy chain 1... 84 6e-015 ref|XP_415109.1| PREDICTED: similar to 1-alpha dynein heavy... 77 5e-013 ref|XP_698507.1| PREDICTED: similar to 1-alpha dynein heavy... 76 9e-013 ref|XP_698418.1| PREDICTED: similar to 1-alpha dynein heavy... 76 9e-013 emb|CAG08488.1| unnamed protein product [Tetraodon nigrovir... 73 1e-011 ref|XP_394775.2| PREDICTED: similar to ENSANGP00000022143 [... 64 6e-009 >emb|CAB56598.1| 1-alpha dynein heavy chain [Chlamydomonas reinhardtii] sp|Q9SMH3|DYH1A_CHLRE Dynein 1-alpha heavy chain, flagellar inner arm I1 complex (1-alpha DHC) (Dynein 1, subspecies f) Length = 4625
Identities = 40/73 (54%), Positives = 56/73 (76%), Gaps = 1/73 (1%) Frame = -3
RWMDGTCVET Q+ ++D+EP+ F+F+ D++ANPQVIKT L +NQSI R+ + K+ E Sbjct: 1056 RWMDGTCVETPEQRGATDDDEPIVFTFYWDVAANPQVIKTMLNLNQSIQRAITSVNKYAE 1115
W+R++ LWK DK Sbjct: 1116 SWRRHQALWKTDK 1128 ---------------- gnl|ti|818418421 name:POAA-aaa29j24.b1 mate_pair:818418099 (211 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_638711.1| hypothetical protein DDB0185880 [Dictyoste... 51 1e-005 ref|XP_644259.1| hypothetical protein DDB0167574 [Dictyoste... 45 6e-004 ref|XP_646416.1| hypothetical protein DDB0190683 [Dictyoste... 45 8e-004 ref|XP_640438.1| hypothetical protein DDB0205121 [Dictyoste... 44 0.002 ref|XP_639268.1| hypothetical protein DDB0185273 [Dictyoste... 43 0.003 ref|XP_642394.1| NGAP-like protein [Dictyostelium discoideu... 42 0.007 ref|XP_716352.1| hypothetical protein CaO19_12686 [Candida ... 41 0.015 ref|XP_716288.1| hypothetical protein CaO19_5219 [Candida a... 41 0.015 gb|EAA78756.1| hypothetical protein FG11599.1 [Gibberella z... 41 0.015 emb|CAA99093.1| IRA2 [Saccharomyces cerevisiae] >gi|6324491... 41 0.015 >ref|XP_638711.1| hypothetical protein DDB0185880 [Dictyostelium discoideum] gb|EAL65356.1| hypothetical protein DDB0185880 [Dictyostelium discoideum] Length = 1056 Score = 51.2 bits (121), Expect = 1e-005 Identities = 22/42 (52%), Positives = 29/42 (69%) Frame = +2
P+R++ + T+ V KRF VVGGF FLRF+CPA+V PE Sbjct: 204 PIRQILNHTQEKVEKRFKSMKTTVVGGFIFLRFICPAIVAPE 245 ----------- gnl|ti|818418104 name:POAA-aaa29l10.g1 mate_pair:818418426 (679 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAA71993.1| cytochrome oxidase subunit 1 [Physarum polyc... 130 3e-029 gb|AAG17567.1| cytochrome c oxidase subunit 1 [Didymium nig... 124 4e-027 gb|AAG17565.1| cytochrome c oxidase subunit 1 [Stemonitis f... 120 3e-026 gb|AAL26248.1| cytochrome c oxidase subunit I [Seepiophila ... 72 2e-011 gb|AAG27560.1| cytochrome oxidase subunit I [Melanoplus mis... 70 5e-011 gb|AAO72461.1| cytochrome c oxidase subunit I [Fordini sp. ... 69 2e-010 gb|AAO74871.1| cytochrome oxidase subunit 1 [Podocarpus ole... 67 7e-010 gb|AAO74868.1| cytochrome oxidase subunit 1 [Araucaria hete... 67 7e-010 gb|AAD01652.1| cytochrome c oxidase [Araucaria heterophylla] 67 7e-010 pir||S20534 cytochrome-c oxidase (EC 1.9.3.1) chain I - Rho... 60 6e-008 >gb|AAA71993.1| cytochrome oxidase subunit 1 [Physarum polycephalum] sp|Q07434|COX1_PHYPO Cytochrome c oxidase subunit 1 (Cytochrome c oxidase polypeptide I) Length = 594 Score = 130 bits (328), Expect = 3e-029 Identities = 101/227 (44%), Positives = 123/227 (54%), Gaps = 17/227 (7%) Frame = +2
L L + G I +LL R + + F + +FW + L+L F S Sbjct: 222 LLSLPVLAGAITMLLTDRNFNTSFFDATGGGDPILYQHLFWFFGHPEVYILILPGFGIVS 281
+YANK +F + + + + + GF +MYTVGLDVDTR F AATMI+ Sbjct: 282 IIIQAYANKAIFGYLGMVYAMLSIGILGFMVWAHHMYTVGLDVDTRAYFTAATMIIAVPT 341
F WLATLFGSYLKLRTPLLFILGFLILFTLGGLSGVV + AFHDT + Sbjct: 342 GIKIFSWLATLFGSYLKLRTPLLFILGFLILFTLGGLSGVVLANSGLDIAFHDTYYVVAH 401
F + G+ FAAFAAFY F + KS YNPFELRKK Sbjct: 402 FHYVLSMGAVFAAFAAFYHWFSIIKSFTTYEPHEWEFVYNPFELRKK 448 ------------------------------------- nl|ti|818418433 name:POAA-aaa29n04.b1 mate_pair:818418112 (680 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_392063.2| PREDICTED: similar to CG12085-PA, isoform ... 85 2e-015 emb|CAG05516.1| unnamed protein product [Tetraodon nigrovir... 83 9e-015 ref|XP_691707.1| PREDICTED: similar to fuse-binding protein... 81 3e-014 ref|XP_709611.1| PREDICTED: similar to fuse-binding protein... 81 3e-014 ref|XP_709610.1| PREDICTED: similar to fuse-binding protein... 81 3e-014 ref|XP_709609.1| PREDICTED: similar to fuse-binding protein... 81 3e-014 ref|XP_709607.1| PREDICTED: similar to fuse-binding protein... 81 3e-014 ref|XP_709606.1| PREDICTED: similar to RIKEN cDNA 2410104I1... 81 3e-014 ref|XP_709604.1| PREDICTED: similar to fuse-binding protein... 81 3e-014 ref|XP_785572.1| PREDICTED: similar to fuse-binding protein... 80 4e-014 >ref|XP_392063.2| PREDICTED: similar to CG12085-PA, isoform A [Apis mellifera] Length = 814
Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 2/64 (3%) Frame = +3
SRVV+LRNMV PE+VD L+ E+ DECSKFG+VERV+IY ERQS D++ +VIVKIFV F Sbjct: 715 SRVVILRNMVAPEDVDESLQEEIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEF 774
S ++
Sbjct: 775 SQMS 778 -------------- gnl|ti|818418438 name:POAA-aaa29n14.b1 mate_pair:818418117 (506 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_635280.1| hypothetical protein DDB0183955 [Dictyoste... 68 1e-010 ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira ... 44 0.003 emb|CAA73132.1| hypothetical protein [Silene latifolia] 41 0.015 emb|CAA76001.1| leucine-rich repeat protein [Arabidopsis th... 40 0.033 emb|CAA76000.1| leucine-rich repeat protein [Arabidopsis th... 40 0.033 gb|AAF35407.1| unknown protein [Arabidopsis thaliana] 40 0.033 ref|NP_188160.2| protein binding [Arabidopsis thaliana] >gi... 40 0.033 dbj|BAB02370.1| leucine-rich repeat protein; contains simil... 40 0.033 ref|XP_415484.1| PREDICTED: similar to Leucine-rich repeat-... 40 0.043 ref|YP_000807.1| putative lipoprotein [Leptospira interroga... 39 0.056 >ref|XP_635280.1| hypothetical protein DDB0183955 [Dictyostelium discoideum] gb|EAL61750.1| hypothetical protein DDB0183955 [Dictyostelium discoideum] Length = 285 Score = 67.8 bits (164), Expect = 1e-010 Identities = 36/78 (46%), Positives = 46/78 (58%) Frame = +3
+ + RGFGSFNHL +L D+S N +TELT QIGLI TLKELH Sbjct: 95 KLKALPRGFGSFNHLFFL------------------DVSYNSITELTTQIGLISTLKELH 136
SFN ++E+P E++R E ------------------------------ gnl|ti|818423200 name:POAA-aaa30a15.g1 mate_pair:818421532 (902 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_643620.1| hypothetical protein DDB0217727 [Dictyoste... 96 2e-018 ref|XP_395370.1| PREDICTED: similar to ENSANGP00000019078 [... 82 3e-014 gb|AAF50953.2| CG14614-PA [Drosophila melanogaster] >gi|546... 81 6e-014 gb|EAA06830.2| ENSANGP00000019078 [Anopheles gambiae str. P... 80 1e-013 gb|AAM65213.1| flower pigmentation protein ATAN11 [Arabidop... 79 3e-013 ref|NP_172751.1| AN11; nucleotide binding [Arabidopsis thal... 79 3e-013 gb|AAC18912.1| ATAN11 [Arabidopsis thaliana] 79 3e-013 ref|NP_082222.1| WD-repeat protein [Mus musculus] >gi|76645... 78 4e-013 gb|AAH77453.1| MGC82392 protein [Xenopus laevis] >gi|506040... 78 4e-013 dbj|BAE32807.1| unnamed protein product [Mus musculus] 78 4e-013 >ref|XP_643620.1| hypothetical protein DDB0217727 [Dictyostelium discoideum] gb|EAL69713.1| hypothetical protein DDB0217727 [Dictyostelium discoideum] Length = 369 Score = 95.5 bits (236), Expect = 2e-018 Identities = 41/56 (73%), Positives = 52/56 (92%) Frame = -1
+KK IYTY +PW IYG++WSSR+++P+RLA+GSFLEDYTNRVDVIQLNEE++ FEV Yüklə 3,49 Mb. Dostları ilə paylaş:
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