Webmaster's Note: As Gerard says below, his Fourth Report came in two parts
Yüklə 3,49 Mb.
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ref|XP_343470.2| PREDICTED: similar to U3 snoRNP-associated... 55 2e-006 >ref|NP_192450.1| nucleic acid binding / nucleotide binding [Arabidopsis thaliana] emb|CAB81083.1| U3 snoRNP-associated-like protein [Arabidopsis thaliana] gb|AAN15644.1| U3 snoRNP-associated-like protein [Arabidopsis thaliana] gb|AAM20668.1| U3 snoRNP-associated-like protein [Arabidopsis thaliana] Length = 504 Score = 67.0 bits (162), Expect = 8e-010 Identities = 33/56 (58%), Positives = 38/56 (67%) Frame = +1
RYLATGG DR + IWD T E++ F GHR V+ LCF G + LYS S DRTVKV Sbjct: 235 RYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKV 290 -------------------------------- gnl|ti|818418575 name:POAA-aaa33h12.g1 mate_pair:818420825 (761 letters) Score E
Sequences producing significant alignments: (bits) Value ref|XP_640592.1| hypothetical protein DDB0204621 [Dictyoste... 72 3e-011 ref|NP_784016.1| fructokinase [Lactobacillus plantarum WCFS... 60 1e-007 emb|CAA83667.1| fructokinase [Pediococcus pentosaceus] >gi|... 59 2e-007 ref|NP_470151.1| hypothetical protein lin0809 [Listeria inn... 58 4e-007 ref|NP_464340.1| hypothetical protein lmo0813 [Listeria mon... 58 4e-007 ref|ZP_00232432.1| fructokinase [Listeria monocytogenes str... 58 4e-007 ref|ZP_00322990.1| COG1940: Transcriptional regulator/sugar... 57 5e-007 ref|YP_013432.1| fructokinase [Listeria monocytogenes str. ... 56 1e-006 gb|EAN11001.1| ROK [Enterococcus faecium DO] >gi|69244118|r... 55 2e-006 ref|ZP_00315355.1| COG1940: Transcriptional regulator/sugar... 54 5e-006 >ref|XP_640592.1| hypothetical protein DDB0204621 [Dictyostelium discoideum] gb|EAL66614.1| hypothetical protein DDB0204621 [Dictyostelium discoideum] Length = 311 Score = 71.6 bits (174), Expect = 3e-011 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = +3
++ D PVW I G+YLA LCAN+ +SP VIVLGGGV+NR LY I+R +T++ + G Sbjct: 209 EINDDHPVWLIIGNYLAQLCANITCLLSPQVIVLGGGVLNRSILYPIIRTETIKILNGY- 267
I ++Y N F Sbjct: 268 ----IKSKYLTNDF 277 ----------------- gnl|ti|818418578 name:POAA-aaa33h18.g1 mate_pair:818420828 (911 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAV32194.1| putative ATPase [Oryza sativa (japonica cult... 60 1e-007 ref|XP_493917.1| similar to Arabidopsis thaliana putative A... 60 1e-007 dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza ... 59 3e-007 ref|NP_918696.1| putative DNA-dependent ATPase [Oryza sativ... 59 3e-007 ref|NP_568365.2| ATP binding / ATP-dependent helicase/ DNA ... 58 4e-007 ref|NP_850847.1| ATP binding / ATP-dependent helicase/ DNA ... 58 4e-007 gb|AAH76715.1| ISWI protein [Xenopus laevis] 57 7e-007 ref|NP_001007993.1| MGC79455 protein [Xenopus tropicalis] >... 57 9e-007 gb|AAG01537.2| imitation switch ISWI [Xenopus laevis] 57 9e-007 ref|XP_396195.2| PREDICTED: similar to ENSANGP00000016886 [... 56 2e-006 >gb|AAV32194.1| putative ATPase [Oryza sativa (japonica cultivar-group)] Length = 1158 Score = 59.7 bits (143), Expect = 1e-007 Identities = 29/47 (61%), Positives = 32/47 (68%) Frame = +3
VLIFSQMTRLLD+LEDY K YQYCRIDG + R A + A P Sbjct: 605 VLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKP 651 --------------- gnl|ti|818420839 name:POAA-aaa33j18.b1 mate_pair:818418588 (765 letters)
Score E
Sequences producing significant alignments: (bits) Value emb|CAJ00344.1| chloramphenicol acetyltransferase [Aeromona... 199 1e-049 --------------------- gnl|ti|818420840 name:POAA-aaa33j20.b1 mate_pair:818418589 (867 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_637908.1| hypothetical protein DDB0186784 [Dictyoste... 116 9e-025 gb|AAB32419.1| CAR4=cell-surface G protein-linked cAMP rece... 59 3e-007 ref|XP_642216.1| G-protein-coupled receptor [Dictyostelium ... 57 8e-007 ref|XP_637844.1| G-protein-coupled receptor family protein ... 57 1e-006 ref|NP_941991.1| latrophilin 3 [Mus musculus] >gi|57242889|... 56 2e-006 ref|XP_526614.1| PREDICTED: latrophilin 3 [Pan troglodytes] 56 2e-006 ref|XP_420575.1| PREDICTED: similar to CL3AA [Gallus gallus] 56 2e-006 gb|AAN15633.1| putative G protein-coupled receptor [Arabido... 55 4e-006 ref|NP_175261.1| GCR1 (G-PROTEIN-COUPLED RECEPTOR 1) [Arabi... 55 4e-006 emb|CAA72145.1| putative G protein coupled receptor [Arabid... 54 7e-006 >ref|XP_637908.1| hypothetical protein DDB0186784 [Dictyostelium discoideum] gb|EAL64397.1| hypothetical protein DDB0186784 [Dictyostelium discoideum] Length = 306
Identities = 52/111 (46%), Positives = 76/111 (68%) Frame = -1
F+L P LR+ P Y SI F+ FF ++ +++FCIP A+++HYFFLA+F WT Sbjct: 32 FMLYPKLRSYPIKLIIYL-CMSIVFSLFFFEISFRSSNSLFCIPAAILVHYFFLANFFWT 90
F V+FNF+QMIV+RNRD+E E+ YHL++WG+P I++ A K Y ++ G Sbjct: 91 FSVSFNFFQMIVKRNRDSEFYERYYHLISWGIPFIIIIFCAAFKKYVDRGG 141 --------------------- gnl|ti|818420857 name:POAA-aaa33n06.b1 mate_pair:818418606 (861 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|AAL91496.1| ABC transporter AbcG10 [Dictyostelium discoi... 48 4e-004 ref|XP_629362.1| ABC transporter G family protein [Dictyost... 48 4e-004 gb|AAL91502.1| ABC transporter AbcG17 [Dictyostelium discoi... 44 0.009 gb|AAO51417.1| similar to Dictyostelium discoideum (Slime m... 44 0.009 ref|XP_644743.1| ABC transporter G family protein [Dictyost... 44 0.009 ref|XP_325446.1| hypothetical protein [Neurospora crassa] >... 44 0.009 gb|EAL84904.1| ABC multidrug transporter, putative [Aspergi... 43 0.012 gb|EAL84314.1| ABC multidrug transporter, putative [Aspergi... 43 0.016 ref|XP_647273.1| ABC transporter G family protein [Dictyost... 42 0.021 ref|XP_646070.1| ABC transporter G family protein [Dictyost... 42 0.021 >gb|AAL91496.1| ABC transporter AbcG10 [Dictyostelium discoideum] Length = 1466 Score = 48.1 bits (113), Expect = 4e-004 Identities = 37/119 (31%), Positives = 60/119 (50%) Frame = +2
F+ ++ +LF + S+ G+ F+ + + +LL + LFC + F Sbjct: 1290 FYFYITFILFLFICVSL-GQVVSAFCFNVMLAQTILPLLLVMLFLFCGVLVPYEQIPNF- 1347
W+ F+Y+ +P YFLEGV+TSVLK+V V C +L +FS +P L C +F Sbjct: 1348 -----WK----FVYHSNPCRYFLEGVVTSVLKNVFVDCSNEDLTKFS-NPTNLTCKEYF 1396 ---------- gnl|ti|818418831 name:POAA-aaa34e03.g1 mate_pair:818421078 (358 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAL89278.1| metalloprotease disintegrin [Aspergillus fum... 63 3e-009 gb|AAH81807.1| A disintegrin and metalloprotease domain 1 (... 59 5e-008 emb|CAA69908.1| fertilin alpha [Rattus norvegicus] >gi|9910... 59 5e-008 ref|XP_579441.1| PREDICTED: a disintegrin and metalloprotea... 59 5e-008 emb|CAA72277.1| tMDC V [Rattus norvegicus] 59 7e-008 gb|AAI07438.1| Unknown (protein for MGC:125044) [Rattus nor... 59 7e-008 ref|XP_576069.1| PREDICTED: a disintegrin and metalloprotea... 59 7e-008 dbj|BAE21593.1| unnamed protein product [Mus musculus] 58 1e-007 dbj|BAE21364.1| unnamed protein product [Mus musculus] 58 1e-007 ref|XP_345698.2| PREDICTED: similar to ADAM4b [Rattus norve... 58 1e-007 >gb|EAL89278.1| metalloprotease disintegrin [Aspergillus fumigatus Af293] ref|XP_751316.1| metalloprotease disintegrin [Aspergillus fumigatus Af293] gb|AAX47071.1| ADAM protease ADM-A [Aspergillus fumigatus] Length = 607 Score = 63.2 bits (152), Expect = 3e-009 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 26/78 (33%) Frame = +1
CGNG+++ GE+CD + + CC NC FA+ +CRPS Sbjct: 436 CGNGIVEVGEECDCGATCDQNSCCDGSTCRLRAGALCDDAASPCCTNCQFASADTVCRPS 495
G CDV E+C+G + +CP Sbjct: 496 TGPCDVEEMCTGNSTICP 513
gnl|ti|818418870 name:POAA-aaa34k13.g1 mate_pair:818421116 (493 letters) Score E
Sequences producing significant alignments: (bits) Value gb|AAH96498.1| Hypothetical protein LOC613082 [Xenopus trop... 73 4e-012 gb|AAH74145.1| MGC81885 protein [Xenopus laevis] 72 5e-012 gb|AAK27967.1| 17-beta-hydroxysteroid dehydrogenase type 4 ... 71 2e-011 gb|AAH44422.1| Hydroxysteroid (17-beta) dehydrogenase 4 [Da... 71 2e-011 gb|AAH65945.1| Hsd17b4 protein [Danio rerio] 71 2e-011 emb|CAA55037.1| 17beta-estradiol dehydrogenase [Sus scrofa]... 70 2e-011 ref|XP_790626.1| PREDICTED: similar to hydroxysteroid (17-b... 70 3e-011 ref|XP_786662.1| PREDICTED: similar to hydroxysteroid (17-b... 70 3e-011 ref|NP_990274.1| hydroxysteroid (17-beta) dehydrogenase 4 [... 69 5e-011 emb|CAG09600.1| unnamed protein product [Tetraodon nigrovir... 69 6e-011 >gb|AAH96498.1| Hypothetical protein LOC613082 [Xenopus tropicalis] ref|NP_001027490.1| hypothetical protein LOC613082 [Xenopus tropicalis] Length = 740 Score = 72.8 bits (177), Expect = 4e-012 Identities = 31/47 (65%), Positives = 38/47 (80%) Frame = +2
++N + LYRLSGD NPLH DP AAMGGF++PILHGLCSFG++ R Sbjct: 499 ATNADQAALYRLSGDWNPLHIDPSFAAMGGFEKPILHGLCSFGFSAR 545 ---------------- gnl|ti|818421140 name:POAA-aaa34o21.b1 mate_pair:818418897 (493 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_639967.1| hypothetical protein DDB0186291 [Dictyoste... 54 2e-006 ref|XP_638199.1| hypothetical protein DDB0186641 [Dictyoste... 47 2e-004 gb|AAD21511.1| unknown protein [Arabidopsis thaliana] 42 0.008 ref|NP_180357.2| unknown protein [Arabidopsis thaliana] >gi... 42 0.008 gb|AAW76895.1| conserved hypothetical protein [Xanthomonas ... 42 0.010 ref|ZP_00400410.1| hypothetical protein AdehDRAFT_2168 [Ana... 41 0.013 ref|YP_334403.1| hypothetical protein BURPS1710b_3025 [Burk... 41 0.013 ref|YP_335441.1| putative oxidoreductase [Burkholderia pseu... 40 0.023 ref|XP_784252.1| PREDICTED: similar to CG4996-PA [Strongylo... 40 0.030 ref|NP_915375.1| P0506B12.17 [Oryza sativa (japonica cultiv... 40 0.039 >ref|XP_639967.1| hypothetical protein DDB0186291 [Dictyostelium discoideum] gb|EAL64950.1| hypothetical protein DDB0186291 [Dictyostelium discoideum] Length = 1155 Score = 53.9 bits (128), Expect = 2e-006 Identities = 29/91 (31%), Positives = 55/91 (60%) Frame = -1
M D+ LQ +E + +R I P I H N+ A+YLP D+ A+ E+ ++QV++ Sbjct: 1070 MMDVKKLQNNLEQLTTIRPI---PHIKHVENYITAFYLPESDLYNLARD-SEYTIKQVIS 1125
+ VN ++ + ++Q++++ LEEL+K R++ Sbjct: 1126 I--VNVSNHLKKNEKQKLISDLEELEKQRKE 1154 --------- gnl|ti|820220286 name:POAA-aaa35c14.b1 mate_pair:818419163 (368 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_788776.1| PREDICTED: similar to neurobeachin-like 1 ... 67 2e-010 emb|CAG01002.1| unnamed protein product [Tetraodon nigrovir... 64 1e-009 ref|XP_421964.1| PREDICTED: similar to FLJ00341 protein [Ga... 63 3e-009 emb|CAG11967.1| unnamed protein product [Tetraodon nigrovir... 62 5e-009 ref|XP_423664.1| PREDICTED: similar to ALS2CR17; beach, par... 62 5e-009 ref|XP_700653.1| PREDICTED: similar to beach protein, parti... 62 5e-009 dbj|BAC87543.1| unnamed protein product [Homo sapiens] 62 8e-009 ref|NP_945183.1| neurobeachin-like 1 [Homo sapiens] >gi|345... 62 8e-009 ref|XP_516421.1| PREDICTED: similar to KIAA0540 protein [Pa... 62 8e-009 ref|XP_525997.1| PREDICTED: similar to ALS2CR17; beach [Pan... 62 8e-009 >ref|XP_788776.1| PREDICTED: similar to neurobeachin-like 1 [Strongylocentrotus purpuratus] Length = 602 Score = 67.0 bits (162), Expect = 2e-010 Identities = 34/46 (73%), Positives = 36/46 (78%), Gaps = 1/46 (2%) Frame = -2
PNL TG P D+LK SGL QKW R+ISNFDYLMQLNTIAGRTY Sbjct: 547 PNLYYTGAKSPADLLKASGLTQKWINREISNFDYLMQLNTIAGRTY 592 ----------- gnl|ti|820220326 name:POAA-aaa35k06.b1 mate_pair:818419203 (693 letters)
Score E
Sequences producing significant alignments: (bits) Value sp|P22506|BGL1_SACFI Beta-glucosidase 1 precursor (Gentiobi... 49 1e-004 pir||A45956 beta-glucosidase (EC 3.2.1.21) 1 precursor - ye... 49 1e-004 gb|EAL88289.1| beta-glucosidase, putative [Aspergillus fumi... 49 1e-004 gb|EAL84958.1| beta-glucosidase, putative [Aspergillus fumi... 49 1e-004 ref|XP_364315.1| hypothetical protein MG09160.4 [Magnaporth... 49 2e-004 gb|EAA76338.1| hypothetical protein FG06605.1 [Gibberella z... 49 2e-004 gb|EAA70245.1| hypothetical protein FG00166.1 [Gibberella z... 49 2e-004 sp|P22507|BGL2_SACFI Beta-glucosidase 2 precursor (Gentiobi... 49 2e-004 dbj|BAB85988.1| beta-glucosidase [Phanerochaete chrysosporium] 48 3e-004 gb|AAC26490.1| cellulose-binding beta-glucosidase [Phaneroc... 48 3e-004 >sp|P22506|BGL1_SACFI Beta-glucosidase 1 precursor (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) gb|AAA34314.1| beta-glucosidase 1 precursor Length = 876
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 1/42 (2%) Frame = -1
F + AGVG VMCSYN++N TYACEN + LK +GFQ Sbjct: 248 FADSVRAGVGSVMCSYNRVNNTYACENSYMMNHLLKEELGFQ 289 --------------------- gnl|ti|818419206 name:POAA-aaa35k12.g1 mate_pair:820220329 (879 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_643687.1| hypothetical protein DDB0217656 [Dictyoste... 259 6e-068 ref|XP_790530.1| PREDICTED: similar to ubiquitin specific p... 152 2e-035 ref|XP_393596.2| PREDICTED: similar to ubiquitin specific p... 147 5e-034 ref|XP_855134.1| PREDICTED: similar to ubiquitin specific p... 146 8e-034 ref|NP_055524.2| ubiquitin specific protease 34 [Homo sapie... 146 1e-033 emb|CAD38579.1| hypothetical protein [Homo sapiens] 146 1e-033 dbj|BAA25496.2| KIAA0570 protein [Homo sapiens] 146 1e-033 ref|XP_483996.2| PREDICTED: similar to ubiquitin specific p... 144 4e-033 ref|XP_515500.1| PREDICTED: hypothetical protein XP_515500 ... 143 9e-033 ref|XP_792208.1| PREDICTED: similar to ubiquitin specific p... 142 2e-032 >ref|XP_643687.1| hypothetical protein DDB0217656 [Dictyostelium discoideum] gb|EAL69773.1| hypothetical protein DDB0217656 [Dictyostelium discoideum] Length = 2991 Score = 259 bits (663), Expect = 6e-068 Identities = 127/232 (54%), Positives = 166/232 (71%), Gaps = 7/232 (3%) Frame = -2
LI N K +AGQK ++ E+F LF+I TAD HG CPPKCK + SR + F +L EL Sbjct: 1286 LIQDNNEFKLLAGQKGGLVKEVFHECLFNIATADNHGSTCPPKCKTKESRDICFAVLLEL 1345
A N R++ + L+ HH+PEE+R+ W Y P+G+EK+ GYVGLKNLGATCY+NSLMQQ Sbjct: 1346 AKGCEPNLREITTLLMEHHKPEEKRSLWSYFPAGNEKSITGYVGLKNLGATCYINSLMQQ 1405
L+MIPGFRY I ++E+ + + +SLLYQ+++IF +LQESEKK +D +DFC YK DG Sbjct: 1406 LFMIPGFRYNIIQSEEKYNSPQEQQESLLYQLKIIFANLQESEKKSHDPKDFCLTYKYDG 1465
QP NT++QMD DEF MLFDKLE LK + +LKD FGG+ +NQ IS+ C Sbjct: 1466 QPINTSIQMDADEFFNMLFDKLENTLKSTPQEKLLKDFFGGSSVNQFISQEC 1517 -------------------------- gnl|ti|820220349 name:POAA-aaa35o08.b1 mate_pair:818419228 (558 letters)
Score E
Sequences producing significant alignments: (bits) Value gb|EAA73673.1| hypothetical protein FG05398.1 [Gibberella z... 60 3e-008 ref|XP_503145.1| hypothetical protein [Yarrowia lipolytica]... 58 2e-007 ref|XP_326355.1| hypothetical protein [Neurospora crassa] >... 58 2e-007 ref|XP_368873.1| hypothetical protein MG00371.4 [Magnaporth... 57 3e-007 gb|AAG29138.1| Ras guanine nucleotide exchange factor RasGE... 56 6e-007 ref|XP_646271.1| Ras guanine nucleotide exchange factor [Di... 56 6e-007 gb|EAL93922.1| cell division control protein Cdc25, putativ... 55 1e-006 ref|XP_659734.1| hypothetical protein AN2130.2 [Aspergillus... 54 4e-006 gb|EAA15144.2| ENSANGP00000016641 [Anopheles gambiae str. P... 54 4e-006 gb|EAL38630.1| ENSANGP00000028553 [Anopheles gambiae str. P... 53 6e-006 >gb|EAA73673.1| hypothetical protein FG05398.1 [Gibberella zeae PH-1] ref|XP_385574.1| hypothetical protein FG05398.1 [Gibberella zeae PH-1] Length = 1208 Score = 60.5 bits (145), Expect = 3e-008 Identities = 27/60 (45%), Positives = 38/60 (63%) Frame = -1
I G+YLTDLTFI DG P I+ T ++NF K ++V+R+IQ YQ Y+ P P+ + Sbjct: 1106 IPFFGVYLTDLTFIEDGIPSIIKKTNLINFAKRAKTAEVIRDIQQYQNVGYSLQPVPELQ 1165 -------------- gnl|ti|818419235 name:POAA-aaa35o22.g1 mate_pair:820220356 (673 letters)
Score E
Sequences producing significant alignments: (bits) Value dbj|BAD74160.1| coronin [Physarum polycephalum] 110 4e-023 emb|CAA43707.1| coronin [Dictyostelium discoideum] >gi|1169... 79 2e-013 ref|XP_647343.1| coronin [Dictyostelium discoideum] >gi|604... 79 2e-013 ref|XP_415184.1| PREDICTED: similar to Coronin 1C (Coronin ... 76 1e-012 emb|CAG32583.1| hypothetical protein [Gallus gallus] 76 1e-012 gb|AAH68698.1| Coro1c protein [Xenopus laevis] >gi|5821393|... 75 1e-012 ref|XP_707095.1| PREDICTED: similar to coronin, actin bindi... 75 1e-012 ref|XP_683545.1| PREDICTED: similar to Coronin, actin bindi... 75 1e-012 ref|XP_885944.1| PREDICTED: similar to Coronin-1C (Coronin-... 75 2e-012 ref|XP_885922.1| PREDICTED: similar to Coronin-1C (Coronin-... 75 2e-012 >dbj|BAD74160.1| coronin [Physarum polycephalum] Length = 449
Identities = 55/65 (84%), Positives = 58/65 (89%) Frame = -3
G +G+I YYEI+DEAPYFHYLAEFKSSTPQKGLAFLPKRSLNVNECEISRALKLHTN Sbjct: 282 GKGDGNI--RYYEIVDEAPYFHYLAEFKSSTPQKGLAFLPKRSLNVNECEISRALKLHTN 339
KV I
Sbjct: 340 KVEPI 344 ------------------ gnl|ti|820219272 name:POAA-aaa36h11.g1 mate_pair:818418245 (787 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_527487.1| PREDICTED: similar to c-ros-1 tyrosine kin... 80 8e-014 ref|NP_002935.2| proto-oncogene c-ros-1 protein precursor [... 77 5e-013 emb|CAI42375.1| v-ros UR2 sarcoma virus oncogene homolog 1 ... 77 5e-013 sp|P08922|ROS_HUMAN Proto-oncogene tyrosine-protein kinase ... 77 5e-013 gb|AAA60277.1| ROS1 77 5e-013 gb|AAA36580.1| transmembrane protein kinase 3) 77 5e-013 pir||TVHURS kinase-related protein ros-1 precursor - human 77 5e-013 emb|CAA57310.1| c-ros protooncogene [Mus musculus] 76 1e-012 ref|NP_035412.1| Ros1 proto-oncogene [Mus musculus] >gi|558... 76 1e-012 ref|NP_037006.1| v-ros UR2 sarcoma virus oncogene homolog 1... 76 1e-012 >ref|XP_527487.1| PREDICTED: similar to c-ros-1 tyrosine kinase (put.); putative [Pan troglodytes] Length = 1514
Identities = 36/54 (66%), Positives = 42/54 (77%) Frame = +1
L + F R+FG+L+WEILTLGHQPYP SNL+VL+ VQTGGRLE PR CP L Sbjct: 1304 LERMHFIHRSFGILIWEILTLGHQPYPAHSNLDVLNYVQTGGRLEPPRNCPDDL 1357 ------------------------- gnl|ti|820219279 name:POAA-aaa36j07.g1 mate_pair:818418253 (859 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|XP_578859.1| PREDICTED: similar to hypothetical protein... 68 4e-010 gb|AAK21974.1| rRNA promoter binding protein [Rattus norveg... 67 6e-010 gb|EAA16545.1| hypothetical protein [Plasmodium yoelii yoelii] 60 7e-008 gb|EAA21327.1| putative senescence-associated protein [Plas... 52 3e-005 ref|XP_767406.1| hypothetical protein GLP_748_1200_211 [Gia... 50 8e-005 gb|AAS66225.1| LRRG00134 [Rattus norvegicus] 44 0.005 dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum] 43 0.012 pir||A35664 PpoI endonuclease - slime mold (Physarum polyce... 40 0.13 gb|AAB65764.1| endonuclease [Physarum polycephalum] 40 0.13 pir||T02955 probable cytochrome P450 monooxygenase - maize ... 38 0.39 >ref|XP_578859.1| PREDICTED: similar to hypothetical protein [Rattus norvegicus] Length = 135 Score = 68.2 bits (165), Expect = 4e-010 Identities = 33/45 (73%), Positives = 36/45 (80%) Frame = +1
+P DDEAFGYLKRVIVTPAVYP + F HF+IQSTGQKS V T Sbjct: 69 VPGADDEAFGYLKRVIVTPAVYPRFIEFLHFDIQSTGQKSHRVNT 113 ---------------- gnl|ti|818418258 name:POAA-aaa36j17.b1 mate_pair:820219284 (721 letters)
Score E
Sequences producing significant alignments: (bits) Value ref|YP_379846.1| S-adenosyl-L-homocysteine hydrolase [Chlor... 84 5e-015 ref|YP_374592.1| S-adenosyl-L-homocysteine hydrolase [Pelod... 83 1e-014 ref|ZP_00532085.1| S-adenosyl-L-homocysteine hydrolase [Chl... 82 2e-014 ref|ZP_00513130.1| S-adenosyl-L-homocysteine hydrolase [Chl... 80 5e-014 ref|ZP_00528400.1| S-adenosyl-L-homocysteine hydrolase [Chl... 80 7e-014 emb|CAD74707.1| adenosylhomocysteinase (S-adenosyl-L-homocy... 80 9e-014 ref|NP_661616.1| adenosylhomocysteinase [Chlorobium tepidum... 79 1e-013 ref|ZP_00591653.1| S-adenosyl-L-homocysteine hydrolase [Pro... 79 2e-013 ref|ZP_00590791.1| S-adenosyl-L-homocysteine hydrolase [Pel... 79 2e-013 Yüklə 3,49 Mb. Dostları ilə paylaş:
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